BP919442 |
Clone id |
YMU001_000125_B07 |
Library |
YMU01 |
Length |
468 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000125_B07. |
Accession |
BP919442 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGTGGGCTGATTTTCAGCCATAAGTAGCGTTTATACTTATCTTCTTTGACAATGAAAACA TCTTTCGAACCCTTTTTGTTCATACATGATACGTCTCCTTGGCCTCTTCGTTGCTTTGTA TTTTTGGCCCACATCAAAGAATGCACATCTGTATTTATCAAATCCGAGAATTCATTGTGC AACATGATCCCATGTTTCGACAAGAAGTATCACATTGAAGTCATTAGTAAGCTCATCAAT GCCAATTCCCGCATTCCATGGATATCCGTTACAATTCCAAAAGCTTATTTGCAAGCGTGA GTTGGTGTCATAGATCATGTGTCCCTATTTGTTGGGTGGACTTGCATCCTCCTCAAGTGG CTTTTTTTCTTGAGATGACACCTTAACCTTCTTGCTTCTTTATTCATATGCTTTGCGACG TACCTTTTTTTGCATAAGAGTGTGATCCTCATATACATTAAAACCCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6LTE0 |
Definition |
sp|Q6LTE0|HEMH_PHOPR Ferrochelatase OS=Photobacterium profundum |
Align length |
49 |
Score (bit) |
32.3 |
E-value |
1.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B1X2N8 |
Definition |
tr|B1X2N8|B1X2N8_CYAA5 Putative uncharacterized protein OS=Cyanothece (strain ATCC 51142) |
Align length |
106 |
Score (bit) |
35.0 |
E-value |
1.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919442|Adiantum capillus-veneris mRNA, clone: YMU001_000125_B07. (468 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B1X2N8|B1X2N8_CYAA5 Putative uncharacterized protein OS=Cyano... 35 1.9 tr|A8BN55|A8BN55_GIALA Putative uncharacterized protein OS=Giard... 35 1.9 tr|A3AJI9|A3AJI9_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.2 tr|A6SFB1|A6SFB1_BOTFB Putative uncharacterized protein OS=Botry... 33 5.5 tr|Q2GFZ0|Q2GFZ0_EHRCR Glutathione S-transferase family protein ... 33 7.1 tr|A9E1S8|A9E1S8_9FLAO Putative uncharacterized protein OS=Kordi... 33 7.1 tr|P88003|P88003_9HIV1 Envelope glycoprotein, C2-V5 region (Frag... 33 9.3 tr|A9XWC8|A9XWC8_9ROSI DNA-directed RNA polymerase (Fragment) OS... 33 9.3 tr|A9XW90|A9XW90_9ROSI DNA-directed RNA polymerase (Fragment) OS... 33 9.3
>tr|B1X2N8|B1X2N8_CYAA5 Putative uncharacterized protein OS=Cyanothece (strain ATCC 51142) GN=cce_5053 PE=4 SV=1 Length = 273
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = +1
Query: 121 FLAHIKECTSVFIKSENSLCNMIPCFDKKYHIEVISKL-INANSRIPWISVTIPKAYLQA 297 F+ +I++ + FI E + N+ + + Y + ++ I ++ I W+S +IP + A Sbjct: 131 FVVYIEKSRTKFIFFEKEMINICQNYLEDYFKPLDKEVVIEKHNHILWVSESIPNPQIFA 190
Query: 298 *VGVIDHVSLFVGWTCILLKWLFFLR*HLNLLASLFI-CFATYLFL 432 + + + + I+L L +NL+ SL + CF +LF+ Sbjct: 191 NYAIYEIDQILITNLSIILYGFLILAYFVNLITSLTVSCFIFFLFV 236
>tr|A8BN55|A8BN55_GIALA Putative uncharacterized protein OS=Giardia lamblia ATCC 50803 GN=GL50803_89117 PE=4 SV=1 Length = 2842
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +1
Query: 34 YLSSLTMKTSFEPFLFIHDTSPWPLRCFVFLAHIKECTSVFIKSENSLCNMIPCF 198 Y+ +++ TSFE I T+ + C +FL K C ++F +S + CN F Sbjct: 805 YMHTISTTTSFE----IESTAVYCPNCSIFLGCCKRCATIFARSHQAECNNFVAF 855
>tr|A3AJI9|A3AJI9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010961 PE=4 SV=1 Length = 695
Score = 33.9 bits (76), Expect = 4.2 Identities = 17/49 (34%), Positives = 27/49 (55%) Frame = +1
Query: 124 LAHIKECTSVFIKSENSLCNMIPCFDKKYHIEVISKLINANSRIPWISV 270 +A +KEC +VF E+ + I F KKY E+ L N+ R W+++ Sbjct: 247 MALVKECGAVFGTKEHFIATEI--FTKKYEREIFMTLDNSEERFAWLTM 293
>tr|A6SFB1|A6SFB1_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_11159 PE=3 SV=1 Length = 1606
Score = 33.5 bits (75), Expect = 5.5 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 10/149 (6%) Frame = +1
Query: 52 MKTSFEPFL---FIHDTSPWPLRCFVFLAHIKECTSVFIKSENSLCNMIPCFDKKYHIEV 222 +KTSF F F D+ PL FV L I TSV I M P F++ ++ Sbjct: 986 IKTSFRKFRRVKFEPDSLSIPLLVFVTLGLICS-TSVSI--------MYPVFERINNVRA 1036
Query: 223 ISKLINANSRIPWISVTIPKAYLQA*VGVIDHVSLFVGWTCILLKWLFFLR*HLNLLASL 402 + + +S W++ I ++ V+ +F G + F+ L A L Sbjct: 1037 LQYSNSVSSAALWMAYLIFDMHIGLITSVVTWAIIFAGGNSRIWYESTFI-----LFAML 1091
Query: 403 FICFATY-------LFLHKSVILIYIKTH 468 C ATY LFL K+ + + H Sbjct: 1092 LFCIATYLGLYICSLFLRKAAFAVAVGVH 1120
>tr|Q2GFZ0|Q2GFZ0_EHRCR Glutathione S-transferase family protein OS=Ehrlichia chaffeensis (strain Arkansas) GN=ECH_0847 PE=4 SV=1 Length = 221
Score = 33.1 bits (74), Expect = 7.1 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%) Frame = +1
Query: 31 LYLSSLTMKTSFE-PFLFIHDTSPWPLRCFVFLAHIKECT--SVFIKSENSLCNMIPCFD 201 LY+ S K + + F H+ + + + V +IK + S FI++ N++P Sbjct: 84 LYIRSTVRKLIYWIDYKFYHEITRYIINEKVSKYYIKNASPDSRFIQAARQ--NLLP--- 138
Query: 202 KKYHIEVISKLINANSRIPWISVTIPKAYLQA*VGVIDHVSLFVGW--TCILLKW 360 HI I +L+N NS I T+ L A + V+D +++F W T IL +W Sbjct: 139 ---HIRYIERLLNNNSWIACNEFTLADITLAAHISVLDFMNIF-PWHSTAILKEW 189
>tr|A9E1S8|A9E1S8_9FLAO Putative uncharacterized protein OS=Kordia algicida OT-1 GN=KAOT1_22496 PE=4 SV=1 Length = 132
Score = 33.1 bits (74), Expect = 7.1 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Frame = -1
Query: 288 ISFWNCNGYPWNAGIGIDEL----TNDFNVILLVETWDHVAQ*ILGFDKYRCAFFDVGQK 121 +SF+ CN +P + + EL ND ++L V T + +AQ + D FF+ Sbjct: 17 LSFFGCNNFPKENNVTVQELHDVLANDEVIVLDVRTPEEIAQGKIKSDALEANFFEDNFI 76
Query: 120 YKATKR-PRRRIMY 82 KAT + P+ + +Y Sbjct: 77 EKATAQLPKDKDVY 90
>tr|P88003|P88003_9HIV1 Envelope glycoprotein, C2-V5 region (Fragment) OS=Human immunodeficiency virus 1 GN=env PE=4 SV=1 Length = 217
Score = 32.7 bits (73), Expect = 9.3 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -1
Query: 324 GHMIYDTNSRLQISFWNCNGYPWNAGIGIDELTNDFNVILLVETWDHVAQ 175 G Y ++L S WN NG WN G D +T + L++ W V + Sbjct: 120 GEFFYCNTTQLFTSTWNANG-TWNGTEGNDTITLTCKIKLIINMWQGVGK 168
>tr|A9XWC8|A9XWC8_9ROSI DNA-directed RNA polymerase (Fragment) OS=Viviania marifolia GN=rpoC2 PE=3 SV=1 Length = 1281
Score = 32.7 bits (73), Expect = 9.3 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +1
Query: 124 LAHIKECTSVFIKSENSLCNMIPCFDKKYHIEVISKLI---NANSRIPWISVTI 276 L+ KEC S+ I S ++ M P D KYH ++ K N +RIP I I Sbjct: 906 LSRKKECQSLIILSSSNYFRMSPLKDFKYHAVIVRKKAIKRNLETRIPIIKSQI 959
>tr|A9XW90|A9XW90_9ROSI DNA-directed RNA polymerase (Fragment) OS=Krameria lanceolata GN=rpoC2 PE=3 SV=1 Length = 1027
Score = 32.7 bits (73), Expect = 9.3 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = +1
Query: 106 LRCFVFLAHIKECTSVFIKSENSLCNMIPCFDKKYHIEVISKLINANS 249 LR F+ KEC S+ I S ++ M P D KYH VI + IN NS Sbjct: 899 LRAFLNRNKNKECRSLIILSSSNCFRMGPFNDIKYH-NVIKESINRNS 945
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