BP919437
Clone id YMU001_000125_B02
Library
Length 473
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTCTTTTTTTGGTAGAAAGCCAAACACTATCTTAACGCACAAATATACATCAAATCT
CCAAGCTTTTCTGACACACAGAAGCAGGTTATTGCTGGGAGGGGGCCAAAAATGCAACAG
CCTTGGGACTAAACTCTCTTCAGACTTCTTATAGAATGAGGATCGTCCCAATATGACCGG
TAAAGGGTTGTAAGGGGGGGTAGACTTTATGATCGCAAATGTAGATGCTTTCCATTGGCT
TCTGCAATCACCCCATTACTCTTCGTAGAATTAAGCTGTTCGGTTCTATCAGCACCTTTG
ATAGGCCCATTATTCAAGAAATTTGCATTTTGATGCAAAAAATTATACTTGGAACCAGTA
TCAGAAGAAATCCTTGTTATTGTCCTACTCGTACTGTCAAGCGAGTTCAAATTCCTTTCT
TCGCCGTCATCTTCTTCATCAGCAGCTGCCACATATTCATCCTCCTCCTCTGA
■■Homology search results ■■ -
sp_hit_id Q6UUW5
Definition sp|Q6UUW5|CRLB_DICDI Cyclic AMP receptor-like protein B OS=Dictyostelium discoideum
Align length 47
Score (bit) 30.4
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919437|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_B02.
(473 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6UUW5|CRLB_DICDI Cyclic AMP receptor-like protein B OS=Dicty... 30 4.2
sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sap... 30 7.1

>sp|Q6UUW5|CRLB_DICDI Cyclic AMP receptor-like protein B
OS=Dictyostelium discoideum GN=crlB PE=2 SV=1
Length = 442

Score = 30.4 bits (67), Expect = 4.2
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3

Query: 246 NHPITLRRIKLFGSISTFDRPIIQEICILMQKIILGTSIRRNP-CYC 383
NH I L LFGS +F II + L++K I S R NP YC
Sbjct: 15 NHLIFLYFANLFGSTLSFLATIITIVFYLVKKYIQNKSFRENPHQYC 61


>sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens
GN=DENND4A PE=1 SV=2
Length = 1863

Score = 29.6 bits (65), Expect = 7.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3

Query: 204 STPPYNPLPVILGRSSFYKKSEESLVPRLLHFWPPPS 94
S PP +P PV L +S Y KSEE RL W P+
Sbjct: 1251 SLPPNSPKPVRLTKSKSYTKSEEKPRDRL---WSSPA 1284


tr_hit_id B7DGU5
Definition tr|B7DGU5|B7DGU5_DESSA Sua5/YciO/YrdC/YwlC family protein OS=Desulfovibrio salexigens DSM 2638
Align length 60
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919437|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_B02.
(473 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7DGU5|B7DGU5_DESSA Sua5/YciO/YrdC/YwlC family protein OS=Des... 35 2.4
tr|A6LG82|A6LG82_PARD8 Periplasmic component of the Tol biopolym... 33 7.1
tr|A4XB96|A4XB96_SALTO Peptidase S9, prolyl oligopeptidase activ... 33 7.1
tr|Q2SPP8|Q2SPP8_HAHCH Predicted phosphohydrolase OS=Hahella che... 33 9.3

>tr|B7DGU5|B7DGU5_DESSA Sua5/YciO/YrdC/YwlC family protein
OS=Desulfovibrio salexigens DSM 2638 GN=DesalDRAFT_2136
PE=4 SV=1
Length = 202

Score = 34.7 bits (78), Expect = 2.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = -3

Query: 249 DCRSQWKASTFAIIKSTPPYNPLPVILGRSSFYKKSEESLVPRLL----HFWPPPSNNLL 82
D + A+ A+IK P PLP+I+G ES+ P LL FWP P + L+
Sbjct: 29 DAMDERAANRVALIKGRPVSKPLPLIIGSIDQLDLVTESVSPELLKLTKKFWPGPLSILV 88


>tr|A6LG82|A6LG82_PARD8 Periplasmic component of the Tol biopolymer
transport system OS=Parabacteroides distasonis (strain
ATCC 8503 / DSM 20701 / NCTC 11152) GN=BDI_2988 PE=4
SV=1
Length = 304

Score = 33.1 bits (74), Expect = 7.1
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 8/50 (16%)
Frame = -3

Query: 168 GRSSFYKKSEESLVPRL--------LHFWPPPSNNLLLCVRKAWRFDVYL 43
GRS Y E VPRL LH W P L C + FDVY+
Sbjct: 114 GRSRIYTLPFEGGVPRLITPLGPSYLHGWSPDGKQLAYCAERNGNFDVYV 163


>tr|A4XB96|A4XB96_SALTO Peptidase S9, prolyl oligopeptidase active
site domain protein OS=Salinispora tropica (strain ATCC
BAA-916 / DSM 44818 / CNB-440) GN=Strop_3764 PE=4 SV=1
Length = 710

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Frame = -3

Query: 255 WGDCRSQWKASTFAIIKSTPPYNPLPVI-------LGRSSFYKKSEES--LVPRLLHFWP 103
W R + +T +TPPY+PLP++ L + Y ++ S +P LL +
Sbjct: 436 WTVWRGDREVATLRSFAATPPYSPLPLLERVTDRRLPAAVLYPENHVSGRRLPVLLDVYG 495

Query: 102 PPSNNLLLCVRKAW 61
P + +L R AW
Sbjct: 496 GPGHQEVLAARSAW 509


>tr|Q2SPP8|Q2SPP8_HAHCH Predicted phosphohydrolase OS=Hahella
chejuensis (strain KCTC 2396) GN=HCH_00466 PE=4 SV=1
Length = 795

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -3

Query: 252 GDCRSQWKASTFAIIKSTPPYNPLPVILGRSSFYKKSEESLVPRLLHFWPPPSNNLLLCV 73
G R W+ F + + PY PL + G +Y +E RL + P N +
Sbjct: 201 GGNRQHWREQLFGSLAAITPYVPLVTVPGNHDYYSDAE----LRLYRSYMAPPENGSIGY 256

Query: 72 RKAWRFDVYLCVKIV 28
W + YL +++V
Sbjct: 257 EDKWYYLDYLDLRLV 271