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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919428
Clone id YMU001_000125_A05
Library
Length 258
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CATCAACTGCAACATCACCATTAGATTCGGCATGGCTTGAAGGAATCCCCCTTGTACTTT
CTTCGACATAGCTCCCCAGCATGATCCACATTAGAAACCGTCCTGCCTACTTTCATCAGC
ATCAACACCACTATCCTTATGTCCATCCCCAGCAGTGACATCATTGGCACCCTTTGACTC
ACCTTCAGCCTCACCCTGCACATCCGTGCTCTCCTTCGTTTCTACCAAGGGTAAAAGAGC
TAAAAACACGTGCTCGAC
■■Homology search results ■■ -
sp_hit_id Q7UM31
Definition sp|Q7UM31|DNAK_RHOBA Chaperone protein dnaK OS=Rhodopirellula baltica
Align length 33
Score (bit) 33.9
E-value 0.25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919428|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_A05.
         (258 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7UM31|DNAK_RHOBA Chaperone protein dnaK OS=Rhodopirellula ba...    34   0.25 
sp|P11327|VL2_PAPVE Minor capsid protein L2 OS=European elk papi...    31   2.2  
sp|Q8WNU4|K1683_MACFA Uncharacterized protein KIAA1683 homolog (...    31   2.2  
sp|Q9Y2F5|K0947_HUMAN Uncharacterized protein KIAA0947 OS=Homo s...    30   3.7  
sp|Q8K4J2|COE4_MOUSE Transcription factor COE4 OS=Mus musculus G...    30   3.7  
sp|Q9BQW3|COE4_HUMAN Transcription factor COE4 OS=Homo sapiens G...    30   3.7  
sp|Q8WZ59|TM190_HUMAN Transmembrane protein 190 OS=Homo sapiens ...    30   4.8  
sp|Q6DCV1|AB1IP_XENLA Amyloid beta A4 precursor protein-binding ...    30   4.8  
sp|Q70XV6|YCF1_AMBTC Putative membrane protein ycf1 OS=Amborella...    29   6.3  
sp|Q3SWW8|TSP4_BOVIN Thrombospondin-4 OS=Bos taurus GN=THBS4 PE=...    29   6.3  
sp|O77638|NFAC1_PIG Nuclear factor of activated T-cells, cytopla...    29   6.3  
sp|Q63257|IL4RA_RAT Interleukin-4 receptor alpha chain OS=Rattus...    29   6.3  
sp|Q085K9|CHEB_SHEFN Chemotaxis response regulator protein-gluta...    29   6.3  
sp|Q5R4H1|T22D1_PONAB TSC22 domain family protein 1 OS=Pongo abe...    25   7.4  
sp|A1XGT3|YCF1_RANMC Putative membrane protein ycf1 OS=Ranunculu...    29   8.2  
sp|P49744|TSP4_RAT Thrombospondin-4 OS=Rattus norvegicus GN=Thbs...    29   8.2  
sp|Q9Z1T2|TSP4_MOUSE Thrombospondin-4 OS=Mus musculus GN=Thbs4 P...    29   8.2  
sp|P35443|TSP4_HUMAN Thrombospondin-4 OS=Homo sapiens GN=THBS4 P...    29   8.2  
sp|Q8IWN7|RP1L1_HUMAN Retinitis pigmentosa 1-like 1 protein OS=H...    29   8.2  
sp|P98088|MUC5A_HUMAN Mucin-5AC (Fragments) OS=Homo sapiens GN=M...    29   8.2  

>sp|Q7UM31|DNAK_RHOBA Chaperone protein dnaK OS=Rhodopirellula
           baltica GN=dnaK PE=2 SV=2
          Length = 645

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 213 ESTDVQGEAEGESKGANDVTAGDGHKDSGVDAD 115
           E TD  GEA  ++ GA   TAG G  D  +DA+
Sbjct: 608 EKTDAAGEAGADAAGAAGATAGGGDDDDAIDAE 640


>sp|P11327|VL2_PAPVE Minor capsid protein L2 OS=European elk
           papillomavirus GN=L2 PE=3 SV=1
          Length = 477

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 28  RHGLKESPLYFLRHSSPA*STLETV--LPTFISINTTILMSIPSSD 159
           R G++  PLY LR S     + ET+  +PT +  +T +L  +P  D
Sbjct: 327 RSGVRVGPLYHLRSSFSTIHSPETIELIPTVLEDDTEVLTGVPERD 372


>sp|Q8WNU4|K1683_MACFA Uncharacterized protein KIAA1683 homolog
           (Fragment) OS=Macaca fascicularis GN=QtsA-12219 PE=2
           SV=2
          Length = 798

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 68  IAPQHDPH*KPSCLLSSASTPLSLCPSPAVTSLAPFDSPSASPCTSVL 211
           I  +H P  + S L S   +P  +CP PA+    P   P A+P  S L
Sbjct: 42  ITAKHQP--QVSLLASIMKSPPQVCPGPAMAKTPPQTHPVATPAKSPL 87


>sp|Q9Y2F5|K0947_HUMAN Uncharacterized protein KIAA0947 OS=Homo
           sapiens GN=KIAA0947 PE=1 SV=4
          Length = 2266

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 216 KESTDVQGEAEGESKGANDVTAGDGHKDSGVDADES 109
           KE  D QG   GES  + D  +GDG   +G+D + S
Sbjct: 594 KEKEDTQGFTLGESPESEDDDSGDGMDVAGLDIETS 629


>sp|Q8K4J2|COE4_MOUSE Transcription factor COE4 OS=Mus musculus
           GN=Ebf4 PE=2 SV=1
          Length = 599

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 113 SSASTPLSLCPS-PAVTSLAPFDSPSASPCTSVLSF 217
           S+A++P ++ PS P + + +    P+A+P TSV SF
Sbjct: 503 STATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSF 538


>sp|Q9BQW3|COE4_HUMAN Transcription factor COE4 OS=Homo sapiens
           GN=EBF4 PE=2 SV=2
          Length = 602

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 113 SSASTPLSLCPS-PAVTSLAPFDSPSASPCTSVLSF 217
           S+A++P ++ PS P + + +    P+A+P TSV SF
Sbjct: 506 STATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSF 541


>sp|Q8WZ59|TM190_HUMAN Transmembrane protein 190 OS=Homo sapiens
           GN=TMEM190 PE=2 SV=1
          Length = 177

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 234 LPLVETKESTDVQGEAEGESKGANDVTAGDGHKD 133
           +P+  +KES DV+G  EGE     + T G+  +D
Sbjct: 144 VPVALSKESRDVEGGTEGEGTEEGEETEGEEEED 177


>sp|Q6DCV1|AB1IP_XENLA Amyloid beta A4 precursor protein-binding
           family B member 1-interacting protein OS=Xenopus laevis
           GN=apbb1ip PE=2 SV=2
          Length = 653

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +2

Query: 47  PPCTFFDIAPQHDPH*KPSCLLSSASTPLSLCPSPAVTSLAPFDSPSASP 196
           PP  FFD  P   P   PS  +S+A  P    P P VT L   ++P+  P
Sbjct: 545 PPPDFFDAPPDFLPPSPPS-FMSNAENP----PPPPVTQLQMSNAPAPPP 589


>sp|Q70XV6|YCF1_AMBTC Putative membrane protein ycf1 OS=Amborella
           trichopoda GN=ycf1 PE=3 SV=2
          Length = 1794

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 222 ETKESTDVQGEAEGESKGANDVTAGDGHKDSGVDADESRQD 100
           ET+E TDV+ E   E+KG      G   +D  +   E + D
Sbjct: 251 ETEEETDVEIERTSETKGTEQEKEGSTEEDPSLFCSEEKGD 291


>sp|Q3SWW8|TSP4_BOVIN Thrombospondin-4 OS=Bos taurus GN=THBS4 PE=2
           SV=1
          Length = 961

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 231 PLVETKESTDVQGEAEGESKGANDVTAGDGHKDS 130
           P V     +DV  +  G+S   N  + GDGH+DS
Sbjct: 606 PEVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDS 639
tr_hit_id B6KJP9
Definition tr|B6KJP9|B6KJP9_TOXGO Protein phosphatase 2C, putative OS=Toxoplasma gondii ME49
Align length 71
Score (bit) 39.3
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919428|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_A05.
         (258 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KJP9|B6KJP9_TOXGO Protein phosphatase 2C, putative OS=Toxop...    39   0.100
tr|B6KM77|B6KM77_TOXGO PHD-finger domain-containing protein OS=T...    36   0.84 
tr|B8C8P8|B8C8P8_THAPS Predicted protein OS=Thalassiosira pseudo...    35   1.9  
tr|Q9SIS2|Q9SIS2_ARATH Putative uncharacterized protein At2g2520...    35   2.5  
tr|Q22BP0|Q22BP0_TETTH Zinc knuckle family protein OS=Tetrahymen...    34   4.2  
tr|A6WGR5|A6WGR5_KINRD Copper resistance protein CopC OS=Kineoco...    34   4.2  
tr|Q0U2B5|Q0U2B5_PHANO Putative uncharacterized protein OS=Phaeo...    34   4.2  
tr|A9TE35|A9TE35_PHYPA Histone deacetylase complex, SIN3 compone...    33   5.4  
tr|Q4SNA3|Q4SNA3_TETNG Chromosome 8 SCAF14543, whole genome shot...    33   5.5  
tr|Q0CEG4|Q0CEG4_ASPTN Putative uncharacterized protein OS=Asper...    33   5.5  
tr|A2FI19|A2FI19_TRIVA Putative uncharacterized protein OS=Trich...    33   9.3  
tr|Q65HC8|Q65HC8_BACLD TPR motif integral membrane protein GluP ...    33   9.3  
tr|B6UGC6|B6UGC6_MAIZE Putative uncharacterized protein OS=Zea m...    33   9.3  
tr|B6KD23|B6KD23_TOXGO GAF domain-containing protein OS=Toxoplas...    33   9.3  
tr|A7T9I8|A7T9I8_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   9.3  
tr|A7RUK8|A7RUK8_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   9.3  

>tr|B6KJP9|B6KJP9_TOXGO Protein phosphatase 2C, putative OS=Toxoplasma
            gondii ME49 GN=TGME49_032010 PE=4 SV=1
          Length = 4041

 Score = 39.3 bits (90), Expect = 0.100
 Identities = 21/71 (29%), Positives = 35/71 (49%)
 Frame = +2

Query: 44   NPPCTFFDIAPQHDPH*KPSCLLSSASTPLSLCPSPAVTSLAPFDSPSASPCTSVLSFVS 223
            +PP     + P    H +   + +S+S+P+S  P P ++S      PS+S C  + SF S
Sbjct: 2734 SPPAALPSVLPSPSSHRRGVSVPASSSSPVSSAPRPFLSSGLSSSPPSSSSCLLLSSFSS 2793

Query: 224  TKGKRAKNTCS 256
                 A+N+ S
Sbjct: 2794 LSDSSARNSSS 2804


>tr|B6KM77|B6KM77_TOXGO PHD-finger domain-containing protein
           OS=Toxoplasma gondii ME49 GN=TGME49_035550 PE=4 SV=1
          Length = 551

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 26/69 (37%), Positives = 33/69 (47%)
 Frame = +2

Query: 8   CNITIRFGMA*RNPPCTFFDIAPQHDPH*KPSCLLSSASTPLSLCPSPAVTSLAPFDSPS 187
           C   +RF  A +  P T F  AP      KPS L SS+ +  SL  S   +S  P  S +
Sbjct: 21  CESPVRFSTARKVTPVTCFVAAPDPAGWPKPSSLSSSSLSSSSLSSSSLSSSSVP-SSAA 79

Query: 188 ASPCTSVLS 214
           +SPC S  S
Sbjct: 80  SSPCCSFSS 88


>tr|B8C8P8|B8C8P8_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_8205 PE=4 SV=1
          Length = 1062

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 71  APQHDPH*KPSCLLSSASTPLSLCPSPAVTSLAPFDSPSASPCTSVLSFVS 223
           +P   P   PS   S++ TP    PSP+ T+ AP  +PS +P +S    V+
Sbjct: 546 SPSSSPSASPSNAPSNSPTPSHPLPSPSYTTQAPSKAPSTTPTSSPTEIVT 596


>tr|Q9SIS2|Q9SIS2_ARATH Putative uncharacterized protein At2g25200
           (At2g25200) OS=Arabidopsis thaliana GN=At2g25200 PE=2
           SV=1
          Length = 354

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 23/53 (43%), Positives = 29/53 (54%)
 Frame = +2

Query: 95  KPSCLLSSASTPLSLCPSPAVTSLAPFDSPSASPCTSVLSFVSTKGKRAKNTC 253
           K S L    S+PLS C  P+ T++   D PSA P  S  S++ST G  A  TC
Sbjct: 2   KISALGRGGSSPLSACFHPSATAIND-DLPSALPSPSNPSYISTSGD-ATTTC 52


>tr|Q22BP0|Q22BP0_TETTH Zinc knuckle family protein OS=Tetrahymena
           thermophila SB210 GN=TTHERM_01093550 PE=4 SV=2
          Length = 1504

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 216 KESTDVQGEAEGESKGANDVTAGDGHKDSGVDADESRQDGF*CG 85
           +E  D QG+ E E  G N V   D  ++   + D+ +QDGF  G
Sbjct: 20  EEEEDYQGQVEEEEDGNNQVEEDDEEEEDDDEQDDYQQDGFVVG 63


>tr|A6WGR5|A6WGR5_KINRD Copper resistance protein CopC
           OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM
           14245 / SRS30216) GN=Krad_4545 PE=4 SV=1
          Length = 241

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 98  PSCLLSSASTPLSLCPSPAVTSLAPFD-SPSASPCTSVLSFVSTKGKRAKNT 250
           P+ + +S  TP S  P+P+ TS +    SP+ASP TS  S  ST    + N+
Sbjct: 158 PAAVATSTMTPPSTSPTPSATSSSTSPTSPAASPTTSTSSTPSTDSVASTNS 209


>tr|Q0U2B5|Q0U2B5_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_14285 PE=4 SV=2
          Length = 259

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = +2

Query: 95  KPSCLLSSASTPLSLCPSPAVTSLAPFDSPSASPCTSVLSFVST 226
           +PS L + AS P S  P P      PF+SPSA P T    F  T
Sbjct: 124 RPSVLTTRASPPASPPPKPLTPPPMPFESPSAPPQTRTKWFQVT 167


>tr|A9TE35|A9TE35_PHYPA Histone deacetylase complex, SIN3 component
            OS=Physcomitrella patens subsp. patens GN=SNT1504 PE=4
            SV=1
          Length = 1500

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 222  ETKESTDVQGEAEGESKGANDVTAGDGHKDSGVDADE 112
            + +E  D + E+EGE++G  DV  GDG ++S + + E
Sbjct: 1098 DEEEDEDGKAESEGEAEGMTDVEDGDGDRNSSLASSE 1134


>tr|Q4SNA3|Q4SNA3_TETNG Chromosome 8 SCAF14543, whole genome shotgun
            sequence OS=Tetraodon nigroviridis GN=GSTENG00015376001
            PE=4 SV=1
          Length = 1604

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = +2

Query: 89   H*KPSCLLSSAS----TPLSLC-PSPAVTSLAPFDSPSASPC 199
            H  P+  LS +S    +PLS C PSP+ T L+P  +PS  PC
Sbjct: 921  HVSPAAPLSCSSPPRHSPLSSCTPSPSPTRLSPIPAPSQPPC 962


>tr|Q0CEG4|Q0CEG4_ASPTN Putative uncharacterized protein
           OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_07920
           PE=4 SV=1
          Length = 371

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = +2

Query: 98  PSCLLSSASTPLSLCPSPAVTSLAPFDSPSASP 196
           P+ L++SA+TP+S    P+ +S+ P  SP++SP
Sbjct: 293 PTTLMTSAATPVSSSAIPSSSSIVPSTSPTSSP 325