BP919402 |
Clone id |
YMU001_000124_F12 |
Library |
YMU01 |
Length |
463 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000124_F12. |
Accession |
BP919402 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAATCAAGGCCAGGCACACACTTGACTTTGATCTATAGCATACAATGCCCATTTTGCCAT TCCAAAGGCCTCTTGACTGCTCAAAGAGCAGGGCGACTTTTGAAGCCAGTAGTTGCAAGA AAAGAAAATTTCAACAAGCTCAAGTATTCTGAACTACAGGCATGCATGCTGCAATTACAT AGCTGATGTATGTTTCCGGCAGTTTGACTGCTTGCCCTCACATTAACAAATCTCGCAATA AAACTGACAATGATGAAAAACAAAACAAATTTGCATCCAACGGGAGTTCACAACTTAGTG TCAGCTCTGCCCCTTCTTCGTAACTTTCTCATTGAATTATCATAAATGAACAGCCTCCAG GAGTAAAACAGACTTCTCAGCACCAAATTGGACACATAATGTCACCATTGTTAGCATGCA CTATTCACCCAAAACAACGATCAGCCTTCCTCATGTAGAAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7YKM5 |
Definition |
sp|Q7YKM5|MATK_PROLU Maturase K OS=Proboscidea lousianica |
Align length |
118 |
Score (bit) |
33.1 |
E-value |
0.6 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919402|Adiantum capillus-veneris mRNA, clone: YMU001_000124_F12. (463 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7YKM5|MATK_PROLU Maturase K OS=Proboscidea lousianica GN=mat... 33 0.60 sp|Q9TIR9|MATK_KIGAF Maturase K OS=Kigelia africana GN=matK PE=3... 32 1.8 sp|Q7YJZ1|MATK_HARGR Maturase K OS=Harpagophyton granidieri GN=m... 31 2.3 sp|Q7YKQ5|MATK_CAMRA Maturase K OS=Campsis radicans GN=matK PE=3... 31 3.0 sp|Q9TIQ5|MATK_VERTH Maturase K OS=Verbascum thapsus GN=matK PE=... 30 3.9 sp|Q8M930|MATK_PAUTO Maturase K OS=Paulownia tomentosa GN=matK P... 30 3.9 sp|Q6EIJ9|MATK_FRECA Maturase K OS=Fremontodendron californicum ... 30 3.9 sp|Q7YKQ3|MATK_GRAOF Maturase K OS=Gratiola officinalis GN=matK ... 30 5.1 sp|Q6EIK1|MATK_PENDO Maturase K OS=Pentaplaris doroteae GN=matK ... 30 6.7 sp|Q54G02|SPXS5_DICDI SPX and EXS domain-containing protein 5 OS... 29 8.5 sp|Q6EIH3|MATK_TILAM Maturase K OS=Tilia americana GN=matK PE=3 ... 29 8.7 sp|Q6EIG9|MATK_THECC Maturase K OS=Theobroma cacao GN=matK PE=3 ... 29 8.7 sp|Q5GAB0|MATK_OTACA Maturase K OS=Otacanthus caeruleus GN=matK ... 29 8.7
>sp|Q7YKM5|MATK_PROLU Maturase K OS=Proboscidea lousianica GN=matK PE=3 SV=1 Length = 500
Score = 33.1 bits (74), Expect = 0.60 Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 17/118 (14%) Frame = -2
Query: 336 FNEKVT-KKGQS*H*VVNSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHAC 160 +N +T KK S +N R + H C++ + S+ R +S + L+ Sbjct: 177 WNSLITPKKASSSFSKINQRLFLFLYNSHVCEYESIFVFLRNQSSHLRSTSSGVLLERIY 236
Query: 159 L*FRILELVEIF-----FSCNYWLQKSPCS-----------LSSQEAFGMAKWALYAI 34 +I LV +F F N WL K PC S + M KW Y + Sbjct: 237 FYGKIEHLVNVFVTVKDFQANLWLVKEPCMHYIRYQRKSILASKGTSLFMNKWKCYLV 294
>sp|Q9TIR9|MATK_KIGAF Maturase K OS=Kigelia africana GN=matK PE=3 SV=1 Length = 509
Score = 31.6 bits (70), Expect = 1.8 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 17/118 (14%) Frame = -2
Query: 336 FNEKVT-KKGQS*H*VVNSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHAC 160 +N +T KKG S N R + H C++ + S+ R +S + L+ Sbjct: 186 WNSLITPKKGSSSFSKRNQRLFLFLYNSHVCEYESIFVFLRNQSSHLRSTSSGVLLERIY 245
Query: 159 L*FRILELVEIF-----FSCNYWLQKSPCS-----------LSSQEAFGMAKWALYAI 34 +I LV +F F N W K PC S + M KW Y + Sbjct: 246 FYEKIERLVNVFVKVKDFQANLWFVKEPCMHYIRYQRKSILASKGTSLFMNKWKCYLV 303
>sp|Q7YJZ1|MATK_HARGR Maturase K OS=Harpagophyton granidieri GN=matK PE=3 SV=1 Length = 506
Score = 31.2 bits (69), Expect = 2.3 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 17/118 (14%) Frame = -2
Query: 336 FNEKVT-KKGQS*H*VVNSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHAC 160 +N +T KK S N R + H C++ + S+ R +S + L+ Sbjct: 186 WNSLITPKKASSSFSKRNQRLFLFLYNSHVCEYEAIFVFLRNQSSHLRSTSSGVLLERIY 245
Query: 159 L*FRILELVEIF-----FSCNYWLQKSPCS-----------LSSQEAFGMAKWALYAI 34 +I LV +F F N WL K PC S + M KW Y + Sbjct: 246 FYGKIERLVNVFVKVKDFQANLWLVKEPCMHYIRYQRKSILASKGTSLFMNKWKCYLV 303
>sp|Q7YKQ5|MATK_CAMRA Maturase K OS=Campsis radicans GN=matK PE=3 SV=1 Length = 511
Score = 30.8 bits (68), Expect = 3.0 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 16/101 (15%) Frame = -2
Query: 288 NSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHACL*FRILELVEIF----- 124 N R + H C++ + S+ R +S + L+ +I LV +F Sbjct: 205 NQRLFLFLYNSHVCEYESVFVFLRNQSSHLRSTSSGVLLERIYFYGKIESLVNVFGKVKD 264
Query: 123 FSCNYWLQKSPCS-----------LSSQEAFGMAKWALYAI 34 F N WL K PC S + M KW Y + Sbjct: 265 FQANLWLVKEPCMHYIRYQRKSLLASKGTSLFMNKWKCYLV 305
>sp|Q9TIQ5|MATK_VERTH Maturase K OS=Verbascum thapsus GN=matK PE=3 SV=1 Length = 509
Score = 30.4 bits (67), Expect = 3.9 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Frame = -2
Query: 336 FNEKVT-KKGQS*H*VVNSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHAC 160 +N +T KK S N R + +H C++ + S+ R +S + L+ Sbjct: 189 WNRLITPKKASSSFSKRNQRLFLFLYNYHVCEYESIFVFLRNQSSHLRSTSSGVFLERIY 248
Query: 159 L*FRILELVEIF-----FSCNYWLQKSPC 88 ++ LV +F F N WL K PC Sbjct: 249 FYGKVERLVNVFGKVKDFQENLWLVKEPC 277
>sp|Q8M930|MATK_PAUTO Maturase K OS=Paulownia tomentosa GN=matK PE=3 SV=1 Length = 511
Score = 30.4 bits (67), Expect = 3.9 Identities = 29/118 (24%), Positives = 42/118 (35%), Gaps = 17/118 (14%) Frame = -2
Query: 336 FNEKVT-KKGQS*H*VVNSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHAC 160 +N +T KK S N R + H C++ + S+ R S + + Sbjct: 188 WNSLITPKKASSSFSKRNQRLFLFLYNSHVCEYESIFVFLRNQSSHLRSTFSGILFERIY 247
Query: 159 L*FRILELVEIF-----FSCNYWLQKSPCS-----------LSSQEAFGMAKWALYAI 34 +I LV +F F N WL K PC S +F M KW Y + Sbjct: 248 FYGKIERLVNVFVKVKDFQANLWLVKEPCMHYIRYQRKSILASKGTSFFMNKWKCYLV 305
>sp|Q6EIJ9|MATK_FRECA Maturase K OS=Fremontodendron californicum GN=matK PE=3 SV=1 Length = 502
Score = 30.4 bits (67), Expect = 3.9 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Frame = -2
Query: 294 VVNSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHACL*FRILELVEIF--- 124 ++N R + H C++ + S+ R +S + L+ +I LVE+F Sbjct: 199 ILNPRLFLFLYNSHACEYESIFLFLRNQSSHLRSTSSGVFLERIFFYGKIEYLVEVFYND 258
Query: 123 FSCNYWLQKSP-----------CSLSSQEAFGMAKWALYAID 31 F N WL K P S + M KW Y +D Sbjct: 259 FQNNLWLFKDPFIHFIRYQGKAILASKDTSLLMNKWKYYFVD 300
>sp|Q7YKQ3|MATK_GRAOF Maturase K OS=Gratiola officinalis GN=matK PE=3 SV=1 Length = 510
Score = 30.0 bits (66), Expect = 5.1 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = -2
Query: 288 NSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHACL*FRILELVEIF----- 124 N R + H C++ + + S+ R +S + L+ +I LV +F Sbjct: 204 NKRLFLFLYNSHVCEYESILVFLRKQSSHLRSTSSGLLLERIYFYAKIERLVNLFVKVKG 263
Query: 123 FSCNYWLQKSPC 88 F N WL K PC Sbjct: 264 FQVNLWLVKEPC 275
>sp|Q6EIK1|MATK_PENDO Maturase K OS=Pentaplaris doroteae GN=matK PE=3 SV=1 Length = 504
Score = 29.6 bits (65), Expect = 6.7 Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 14/102 (13%) Frame = -2
Query: 294 VVNSRWMQICFVFHHCQFYCEIC*CEGKQSNCRKHTSAM*LQHACL*FRILELVEIF--- 124 + N R + H C++ + S+ R +S + L+ +I LVE+F Sbjct: 199 IFNPRLFLFLYNSHACEYESIFLFLRNQSSHLRSTSSGVFLERIYFYGKIEYLVEVFYND 258
Query: 123 FSCNYWLQKSP-----------CSLSSQEAFGMAKWALYAID 31 F N WL K P S + M KW Y +D Sbjct: 259 FQNNLWLFKDPFIHFIRYQGKAILASKDTSLLMNKWKYYFVD 300
>sp|Q54G02|SPXS5_DICDI SPX and EXS domain-containing protein 5 OS=Dictyostelium discoideum GN=DDB_G0290647 PE=4 SV=2 Length = 927
Score = 29.3 bits (64), Expect = 8.5 Identities = 17/74 (22%), Positives = 31/74 (41%) Frame = +3
Query: 219 HINKSRNKTDNDEKQNKFASNGXXXXXXXXXXXXXXXH*IIINEQPPGVKQTSQHQIGHI 398 H +K +NK +N+ N +N H Q P +K+ +QH Sbjct: 200 HYSKKKNKLNNNNNNNNNNNNNNNNTTSPPPLSHDQQH-----LQQPEIKRINQHHAVLN 254
Query: 399 MSPLLACTIHPKQR 440 ++P+ + + PKQ+ Sbjct: 255 LTPIKSTPLSPKQQ 268
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9TIS7 |
Definition |
tr|Q9TIS7|Q9TIS7_9LAMI Maturase K (Fragment) OS=Boschniakia strobilacea |
Align length |
101 |
Score (bit) |
33.5 |
E-value |
5.4 |
Report |
|