BP919397 |
Clone id |
YMU001_000124_F07 |
Library |
YMU01 |
Length |
453 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000124_F07. |
Accession |
BP919397 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGCACATTAATTAAATTGGCATGCTTATTGCTAATCCCCTGCTCCTTTCAGCAATACAAC AGCCCTTATCAAGAATGGATGACATACAAATATCCAACTTATTTAAGCTTTTATTGCACA TCGGACGCAAGTAAAGCCCCCTGCCCTCCTTATACTATGCAAAGTATGAAGCAGAGGATG ATGTATCTGTTAAGATCTCCAATTGTTCCTCATTGAACATAGACTTGTGAATGGCCCAAG TATCTGCATGCGTTCGTCGAAACTCTGATAAACATTTGCGGACCGTTTCTCTAACTGCTG CTGAGTTTTCATTTGAAAACTGAACAAGGGTTGTCACTACTTCGGGAAGCCAGCCTGGCA TATCGTAGGGAACTGATTGCACACATGCACTCAAGCCTAATACCAGAGCATGAACATCAG TGGCAGTTCCACTATTCACTAACCTTCTTCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NRP2 |
Definition |
sp|Q6NRP2|PSME4_XENLA Proteasome activator complex subunit 4 OS=Xenopus laevis |
Align length |
94 |
Score (bit) |
85.9 |
E-value |
7.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LTT5 |
Definition |
tr|Q9LTT5|Q9LTT5_ARATH Similarity to unknown protein OS=Arabidopsis thaliana |
Align length |
97 |
Score (bit) |
110.0 |
E-value |
4.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919397|Adiantum capillus-veneris mRNA, clone: YMU001_000124_F07. (453 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LTT5|Q9LTT5_ARATH Similarity to unknown protein OS=Arabidop... 110 4e-23 tr|Q8RXU1|Q8RXU1_ARATH Putative uncharacterized protein At3g1333... 110 4e-23 tr|A7Q9F8|A7Q9F8_VITVI Chromosome chr19 scaffold_66, whole genom... 110 5e-23 tr|Q5Z876|Q5Z876_ORYSJ Proteasome activator subunit 4-like OS=Or... 93 6e-18 tr|Q17971|Q17971_CAEEL Protein C14C10.5, partially confirmed by ... 90 6e-17 tr|A8X773|A8X773_CAEBR Putative uncharacterized protein OS=Caeno... 87 4e-16 tr|Q5ZL75|Q5ZL75_CHICK Putative uncharacterized protein OS=Gallu... 86 7e-16 tr|Q58EF3|Q58EF3_DANRE LOC553346 protein (Fragment) OS=Danio rer... 86 1e-15 tr|B6PAL7|B6PAL7_BRAFL Putative uncharacterized protein OS=Branc... 85 2e-15 tr|B6M800|B6M800_BRAFL Putative uncharacterized protein OS=Branc... 85 2e-15 tr|Q0DCQ3|Q0DCQ3_ORYSJ Os06g0301300 protein OS=Oryza sativa subs... 85 2e-15 tr|B8B0W6|B8B0W6_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A2ZU29|A2ZU29_ORYSJ Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|B7Q408|B7Q408_IXOSC Proteasome activator complex subunit, put... 85 2e-15 tr|Q4T985|Q4T985_TETNG Chromosome undetermined SCAF7630, whole g... 84 3e-15 tr|Q5EAP2|Q5EAP2_RAT Psme4 protein OS=Rattus norvegicus GN=Psme4... 84 5e-15 tr|Q4R7N5|Q4R7N5_MACFA Testis cDNA, clone: QtsA-14737, similar t... 84 5e-15 tr|A3KMZ1|A3KMZ1_BOVIN PSME4 protein (Fragment) OS=Bos taurus GN... 84 5e-15 tr|B3RKW2|B3RKW2_TRIAD Putative uncharacterized protein OS=Trich... 82 1e-14 tr|A8PKL5|A8PKL5_BRUMA MGC83251 protein, putative OS=Brugia mala... 79 1e-13 tr|A8PKK5|A8PKK5_BRUMA Putative uncharacterized protein OS=Brugi... 79 1e-13 tr|Q4RQ73|Q4RQ73_TETNG Chromosome 17 SCAF15006, whole genome sho... 77 4e-13 tr|A8Q7X1|A8Q7X1_MALGO Putative uncharacterized protein OS=Malas... 75 1e-12 tr|B6KFS8|B6KFS8_TOXGO Putative uncharacterized protein OS=Toxop... 75 2e-12 tr|Q01CB1|Q01CB1_OSTTA Proteasome activator subunit 4-like (ISS)... 74 4e-12 tr|B0CP75|B0CP75_LACBS Predicted protein OS=Laccaria bicolor (st... 74 5e-12 tr|B0CP61|B0CP61_LACBS Predicted protein OS=Laccaria bicolor (st... 74 5e-12 tr|B8BSK4|B8BSK4_THAPS Predicted protein (Fragment) OS=Thalassio... 73 6e-12 tr|Q5CQJ6|Q5CQJ6_CRYPV Very large low complexity protein OS=Cryp... 72 1e-11 tr|Q5CF22|Q5CF22_CRYHO Putative uncharacterized protein OS=Crypt... 72 1e-11
>tr|Q9LTT5|Q9LTT5_ARATH Similarity to unknown protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 1716
Score = 110 bits (275), Expect = 4e-23 Identities = 56/97 (57%), Positives = 69/97 (71%) Frame = -3
Query: 448 RRLVNSGTATDVHALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCL 269 R+ ++ + VH VLGL A V SVPYDMP WLPE VT L +F+ E + ++ TV K + Sbjct: 1621 RKSSSTQSIAGVHGAVLGLVASVLSVPYDMPSWLPEHVTLLARFAGEPTP-IKSTVTKAV 1679
Query: 268 SEFRRTHADTWAIHKSMFNEEQLEILTDTSSSASYFA 158 +EFRRTHADTW I K F E+QLEIL DTSSS+SYFA Sbjct: 1680 AEFRRTHADTWNIQKDSFTEDQLEILADTSSSSSYFA 1716
>tr|Q8RXU1|Q8RXU1_ARATH Putative uncharacterized protein At3g13330 (Fragment) OS=Arabidopsis thaliana GN=At3g13330 PE=2 SV=1 Length = 180
Score = 110 bits (275), Expect = 4e-23 Identities = 56/97 (57%), Positives = 69/97 (71%) Frame = -3
Query: 448 RRLVNSGTATDVHALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCL 269 R+ ++ + VH VLGL A V SVPYDMP WLPE VT L +F+ E + ++ TV K + Sbjct: 85 RKSSSTQSIAGVHGAVLGLVASVLSVPYDMPSWLPEHVTLLARFAGEPTP-IKSTVTKAV 143
Query: 268 SEFRRTHADTWAIHKSMFNEEQLEILTDTSSSASYFA 158 +EFRRTHADTW I K F E+QLEIL DTSSS+SYFA Sbjct: 144 AEFRRTHADTWNIQKDSFTEDQLEILADTSSSSSYFA 180
>tr|A7Q9F8|A7Q9F8_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033457001 PE=4 SV=1 Length = 108
Score = 110 bits (274), Expect = 5e-23 Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 1/98 (1%) Frame = -3
Query: 448 RRLVNSGTA-TDVHALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKC 272 +R +N G + +H VL L+A V SVPYDMP WLPE VT L F E S V+ TV K Sbjct: 12 QRNLNPGQSIASIHGAVLALAASVLSVPYDMPSWLPEHVTLLAHFVREPSP-VKSTVTKA 70
Query: 271 LSEFRRTHADTWAIHKSMFNEEQLEILTDTSSSASYFA 158 ++EFRRTHADTW + K F+EEQLE+L DTSSS+SYFA Sbjct: 71 VAEFRRTHADTWNVQKDSFSEEQLEVLADTSSSSSYFA 108
>tr|Q5Z876|Q5Z876_ORYSJ Proteasome activator subunit 4-like OS=Oryza sativa subsp. japonica GN=OJ1217_C01.10 PE=4 SV=1 Length = 1818
Score = 93.2 bits (230), Expect = 6e-18 Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 16/102 (15%) Frame = -3
Query: 415 VHALVLGLSACVQSVPYDMPG----------------WLPEVVTTLVQFSNENSAAVRET 284 +H VL L+A V SVPYDMP WLP VT L +F E S ++ T Sbjct: 1718 IHGAVLALTASVLSVPYDMPRYLRDFNPCLFRLKRTIWLPSHVTLLARFIREPSP-IKST 1776
Query: 283 VRKCLSEFRRTHADTWAIHKSMFNEEQLEILTDTSSSASYFA 158 V K ++EF+RTHADTW+I K F E++LE+L DTSSS+SYFA Sbjct: 1777 VTKAVAEFKRTHADTWSIQKEAFTEDELEVLRDTSSSSSYFA 1818
>tr|Q17971|Q17971_CAEEL Protein C14C10.5, partially confirmed by transcript evidence OS=Caenorhabditis elegans GN=C14C10.5 PE=2 SV=1 Length = 1908
Score = 89.7 bits (221), Expect = 6e-17 Identities = 41/84 (48%), Positives = 59/84 (70%) Frame = -3
Query: 412 HALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCLSEFRRTHADTWA 233 HA VLGLSA V + PY +P +LP V+ T+ +F+ + SA +RE V++ LSEF+RTH D+W Sbjct: 1824 HAGVLGLSAIVLAFPYSVPEFLPGVLMTICRFATDKSATIREAVKRTLSEFKRTHQDSWR 1883
Query: 232 IHKSMFNEEQLEILTDTSSSASYF 161 H+ FNE+QL +L D S +Y+ Sbjct: 1884 EHEQQFNEDQLMVLRDLLISPNYY 1907
>tr|A8X773|A8X773_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG08524 PE=4 SV=2 Length = 1917
Score = 87.0 bits (214), Expect = 4e-16 Identities = 40/92 (43%), Positives = 59/92 (64%) Frame = -3
Query: 436 NSGTATDVHALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCLSEFR 257 NS H V+GLSA V + PY +P LP V+ T+ +F+ + +A +RE V++ LSEF+ Sbjct: 1825 NSQDMVQAHGGVMGLSAIVLAFPYSVPPLLPGVLMTICRFATDKNAIIREAVKRTLSEFK 1884
Query: 256 RTHADTWAIHKSMFNEEQLEILTDTSSSASYF 161 RTH D+W H+ FNE+QL +L D S +Y+ Sbjct: 1885 RTHQDSWREHEQQFNEDQLMVLRDLLISPNYY 1916
>tr|Q5ZL75|Q5ZL75_CHICK Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_7f10 PE=2 SV=1 Length = 220
Score = 86.3 bits (212), Expect = 7e-16 Identities = 43/94 (45%), Positives = 57/94 (60%) Frame = -3
Query: 439 VNSGTATDVHALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCLSEF 260 + SG HA VLGLSAC+ S PYD+P W+P+++ L N+ + TV+K LS F Sbjct: 128 IPSGDLVKRHAGVLGLSACILSSPYDVPTWMPQLLMDLSAHLNDPQP-IEMTVKKTLSNF 186
Query: 259 RRTHADTWAIHKSMFNEEQLEILTDTSSSASYFA 158 RRTH D W HK F ++QL +LTD S Y+A Sbjct: 187 RRTHHDNWQEHKQQFTDDQLLVLTDLLVSPCYYA 220
>tr|Q58EF3|Q58EF3_DANRE LOC553346 protein (Fragment) OS=Danio rerio GN=LOC553346 PE=2 SV=1 Length = 286
Score = 85.5 bits (210), Expect = 1e-15 Identities = 41/85 (48%), Positives = 54/85 (63%) Frame = -3
Query: 412 HALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCLSEFRRTHADTWA 233 HA VLGLSAC+ S PYD+P W+P+++ L N+ + TV+K LS FRRTH D W Sbjct: 203 HAGVLGLSACILSSPYDVPTWMPQLLMDLSAHLNDTQP-IEMTVKKTLSNFRRTHHDNWL 261
Query: 232 IHKSMFNEEQLEILTDTSSSASYFA 158 HK F ++QL +LTD S Y+A Sbjct: 262 EHKQQFTDDQLVVLTDLLVSPCYYA 286
>tr|B6PAL7|B6PAL7_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_104713 PE=4 SV=1 Length = 1793
Score = 85.1 bits (209), Expect = 2e-15 Identities = 43/85 (50%), Positives = 55/85 (64%) Frame = -3
Query: 412 HALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCLSEFRRTHADTWA 233 HA VLGL ACV S PYD+P W+P+++ L N+ + TV+K LS+FRRTH D W Sbjct: 1710 HAGVLGLCACVLSYPYDVPEWMPQLLLELGDHLNDPQP-IAGTVKKTLSDFRRTHHDNWQ 1768
Query: 232 IHKSMFNEEQLEILTDTSSSASYFA 158 HK F E+QL +LTD S SY+A Sbjct: 1769 EHKQRFTEDQLCMLTDLLVSPSYYA 1793
>tr|B6M800|B6M800_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_280538 PE=4 SV=1 Length = 1825
Score = 85.1 bits (209), Expect = 2e-15 Identities = 43/85 (50%), Positives = 55/85 (64%) Frame = -3
Query: 412 HALVLGLSACVQSVPYDMPGWLPEVVTTLVQFSNENSAAVRETVRKCLSEFRRTHADTWA 233 HA VLGL ACV S PYD+P W+P+++ L N+ + TV+K LS+FRRTH D W Sbjct: 1742 HAGVLGLCACVLSYPYDVPEWMPQLLLELGDHLNDPQP-IAGTVKKTLSDFRRTHHDNWQ 1800
Query: 232 IHKSMFNEEQLEILTDTSSSASYFA 158 HK F E+QL +LTD S SY+A Sbjct: 1801 EHKQRFTEDQLCMLTDLLVSPSYYA 1825
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