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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919352
Clone id YMU001_000124_B01
Library
Length 420
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTGCAAAACTCACAATTGTGAGTGGATAGTATTAAGAACACCAGATAATAT
ACACCAACCTCAAGCTCAGACCAAGCCTTGAGGGTCGAAGGATTACAAGTTTTCTGCTTG
ACAGAGAAACCATAACTACTCCTAGGCTTTACTTATTACAAGATGTCATCATGCCATGTA
TTGTTCTAGACCAGTCCTCCGAGGCTTGTTTGCCTCCAATCTATTGGATCGTCACTCTAC
TCTCTTGTATGATTTCACAAAAGCTTGCCACAGCCAGATCCCCCTCAAACACGCGACGGT
TCCTTGCTTGCCAAATATGGTGAAAGAAGTAGTACCTGATTACTTGAGTGCAGACAAGAA
GAACAGGACTTCCCAACGTGTTACTACCAAAGAACAGATCAGTCTTGAAGAACTTAATTT
■■Homology search results ■■ -
sp_hit_id Q06001
Definition sp|Q06001|FAR10_YEAST Factor arrest protein 10 OS=Saccharomyces cerevisiae
Align length 40
Score (bit) 32.7
E-value 0.59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919352|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_B01.
         (409 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q06001|FAR10_YEAST Factor arrest protein 10 OS=Saccharomyces ...    33   0.59 
sp|Q06405|ATPK_YEAST ATP synthase subunit f, mitochondrial OS=Sa...    32   1.00 
sp|Q9V3Q6|M3K7_DROME Mitogen-activated protein kinase kinase kin...    29   6.3  
sp|Q9D9I4|TBC20_MOUSE TBC1 domain family member 20 OS=Mus muscul...    29   8.2  
sp|Q7TMY8|HUWE1_MOUSE E3 ubiquitin-protein ligase HUWE1 OS=Mus m...    29   8.2  

>sp|Q06001|FAR10_YEAST Factor arrest protein 10 OS=Saccharomyces
           cerevisiae GN=FAR10 PE=1 SV=1
          Length = 478

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 141 VKPRSSYGFSVKQKTCNPSTLKAWSELEVGVYYLVFLILS 22
           + P+ +  FS+K   CN  TL  +  + +G+  +VF ILS
Sbjct: 437 MNPKGTDKFSIKNTLCNHFTLLTFGTISIGIIAIVFKILS 476


>sp|Q06405|ATPK_YEAST ATP synthase subunit f, mitochondrial
           OS=Saccharomyces cerevisiae GN=ATP17 PE=1 SV=1
          Length = 101

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
 Frame = +2

Query: 185 PPRLVCLQSIGSS-----LYSLV*FHKSLPQPDPPQTRDGSLLAKY 307
           PP++V  ++IGS+     + ++V F+KSLPQ   P  +  + LA+Y
Sbjct: 12  PPKVVSSKNIGSAPNAKRIANVVHFYKSLPQGPAPAIKANTRLARY 57


>sp|Q9V3Q6|M3K7_DROME Mitogen-activated protein kinase kinase kinase
           7 OS=Drosophila melanogaster GN=Tak1 PE=2 SV=1
          Length = 678

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 240 DFTKACHSQIPLKHATVPCLPNMVKEVVPDYLSADKK---NRTSQRVTTKE 383
           D   AC   +P    ++  +  ++ E+V DY  ADK       +Q++ TKE
Sbjct: 244 DLMTACWKTVPEDRPSMQYIVGVMHEIVKDYTGADKALEYTFVNQQIVTKE 294


>sp|Q9D9I4|TBC20_MOUSE TBC1 domain family member 20 OS=Mus musculus
           GN=Tbc1d20 PE=2 SV=1
          Length = 402

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 198 FASNLLD-RHSTLLYDFTKACHSQIPLKHATV 290
           F   L+D RH   LYDF  ACH  +P+  A V
Sbjct: 224 FGHVLMDFRHVVRLYDFFLACHPLMPIYFAAV 255


>sp|Q7TMY8|HUWE1_MOUSE E3 ubiquitin-protein ligase HUWE1 OS=Mus
            musculus GN=Huwe1 PE=1 SV=4
          Length = 4377

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +3

Query: 270  PLKHATVPCLPNMVKEVVPDYLSA 341
            PLK +++P +P+ +KEV+ D L+A
Sbjct: 1929 PLKPSSLPVIPDTIKEVIYDMLNA 1952
tr_hit_id Q4P423
Definition tr|Q4P423|Q4P423_USTMA Putative uncharacterized protein OS=Ustilago maydis
Align length 47
Score (bit) 33.5
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919352|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_B01.
         (409 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4P423|Q4P423_USTMA Putative uncharacterized protein OS=Ustil...    33   5.5  
tr|B1IN03|B1IN03_CLOBK Formate acetyltransferase OS=Clostridium ...    33   7.2  
tr|A7GIC4|A7GIC4_CLOBL Formate acetyltransferase OS=Clostridium ...    33   7.2  
tr|B1QM07|B1QM07_CLOBO Formate acetyltransferase OS=Clostridium ...    33   7.2  
tr|B1QA58|B1QA58_CLOBO Formate acetyltransferase OS=Clostridium ...    33   7.2  
tr|A7I8E4|A7I8E4_METB6 Signal transduction histidine kinase OS=M...    33   7.2  
tr|B5VNF5|B5VNF5_YEAS6 YLR238Wp-like protein OS=Saccharomyces ce...    33   9.3  
tr|B3RHC3|B3RHC3_YEAS1 Factor arrest protein 10 OS=Saccharomyces...    33   9.3  
tr|A7A1C1|A7A1C1_YEAS7 Conserved protein OS=Saccharomyces cerevi...    33   9.3  
tr|B1L0Y3|B1L0Y3_CLOBM Formate acetyltransferase OS=Clostridium ...    33   9.4  
tr|A8MJC1|A8MJC1_ALKOO RNA-metabolising metallo-beta-lactamase O...    33   9.4  

>tr|Q4P423|Q4P423_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM05140.1 PE=4 SV=1
          Length = 168

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
 Frame = +2

Query: 185 PPRLVCLQSI----GSS--LYSLV*FHKSLPQPDPPQTRDGSLLAKY 307
           PP++   +S     GSS  + S+V F+KSLP+ D PQ R G + A+Y
Sbjct: 29  PPKIATPKSASGPGGSSARMESVVGFYKSLPKGDAPQKRGGGIKARY 75


>tr|B1IN03|B1IN03_CLOBK Formate acetyltransferase OS=Clostridium
           botulinum (strain Okra / Type B1) GN=CLD_1348 PE=4 SV=1
          Length = 787

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +3

Query: 174 SRPVLRGLFASNLLDRHSTLLYDFTKACHSQIPLKHATVPCLPNMVKEVVPDYLSADKKN 353
           S PVLR L    L++R    +YD       +     AT P  P +    V D+   DK+ 
Sbjct: 40  SIPVLRALVLKELMERKELCIYDGELIVGERGEAAAAT-PTYPELCCHTVEDFDIMDKRE 98

Query: 354 RTSQRVTTKEQISLEEL 404
           + S + T +++   EEL
Sbjct: 99  KISFKTTDEDKEIQEEL 115


>tr|A7GIC4|A7GIC4_CLOBL Formate acetyltransferase OS=Clostridium
           botulinum (strain Langeland / NCTC 10281 / Type F)
           GN=CLI_3322 PE=4 SV=1
          Length = 787

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +3

Query: 174 SRPVLRGLFASNLLDRHSTLLYDFTKACHSQIPLKHATVPCLPNMVKEVVPDYLSADKKN 353
           S PVLR L    L++R    +YD       +     AT P  P +    V D+   DK+ 
Sbjct: 40  SIPVLRALVLKELMERKELCIYDGELIVGERGEAAAAT-PTYPELCCHTVEDFDIMDKRE 98

Query: 354 RTSQRVTTKEQISLEEL 404
           + S + T +++   EEL
Sbjct: 99  KISFKTTDEDKEIQEEL 115


>tr|B1QM07|B1QM07_CLOBO Formate acetyltransferase OS=Clostridium
           botulinum Bf GN=CBB_3479 PE=4 SV=1
          Length = 787

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +3

Query: 174 SRPVLRGLFASNLLDRHSTLLYDFTKACHSQIPLKHATVPCLPNMVKEVVPDYLSADKKN 353
           S PVLR L    L++R    +YD       +     AT P  P +    V D+   DK+ 
Sbjct: 40  SIPVLRALVLKELMERKELCIYDGELIVGERGQAAAAT-PTYPELCCHTVEDFDIMDKRE 98

Query: 354 RTSQRVTTKEQISLEEL 404
           + S + T +++   EEL
Sbjct: 99  KISFKTTDEDKEIQEEL 115


>tr|B1QA58|B1QA58_CLOBO Formate acetyltransferase OS=Clostridium
           botulinum NCTC 2916 GN=CBN_3229 PE=4 SV=1
          Length = 787

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +3

Query: 174 SRPVLRGLFASNLLDRHSTLLYDFTKACHSQIPLKHATVPCLPNMVKEVVPDYLSADKKN 353
           S PVLR L    L++R    +YD       +     AT P  P +    V D+   DK+ 
Sbjct: 40  SIPVLRALVLKELMERKELCIYDGELIVGERGEAAAAT-PTYPELCCHTVEDFDIMDKRE 98

Query: 354 RTSQRVTTKEQISLEEL 404
           + S + T +++   EEL
Sbjct: 99  KISFKTTDEDKEIQEEL 115


>tr|A7I8E4|A7I8E4_METB6 Signal transduction histidine kinase
           OS=Methanoregula boonei (strain 6A8) GN=Mboo_1487 PE=4
           SV=1
          Length = 924

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
 Frame = -3

Query: 368 TLGSPVLLVCT-QVIRYYFFHHIWQARNRRVFEGDLAVAS-----FCEIIQESRVTIQ*I 207
           T G+ VL+    Q  RY FF+  ++   RR+   DL + +     F EI +E + T+   
Sbjct: 308 TKGTSVLIAAQDQDFRYIFFNQTYKEEIRRITGKDLTLGASMIELFAEIPEEQKRTV--- 364

Query: 206 GGKQASEDWSRTIHG 162
                  +WS+ +HG
Sbjct: 365 ------NEWSKVLHG 373


>tr|B5VNF5|B5VNF5_YEAS6 YLR238Wp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_122830 PE=4
           SV=1
          Length = 478

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 141 VKPRSSYGFSVKQKTCNPSTLKAWSELEVGVYYLVFLILS 22
           + P+ +  FS+K   CN  TL  +  + +G+  +VF ILS
Sbjct: 437 MNPKGTDKFSIKNTLCNHFTLLTFGTISIGIIAIVFKILS 476


>tr|B3RHC3|B3RHC3_YEAS1 Factor arrest protein 10 OS=Saccharomyces
           cerevisiae (strain RM11-1a) GN=SCRG_04191 PE=4 SV=1
          Length = 478

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 141 VKPRSSYGFSVKQKTCNPSTLKAWSELEVGVYYLVFLILS 22
           + P+ +  FS+K   CN  TL  +  + +G+  +VF ILS
Sbjct: 437 MNPKGTDKFSIKNTLCNHFTLLTFGTISIGIIAIVFKILS 476


>tr|A7A1C1|A7A1C1_YEAS7 Conserved protein OS=Saccharomyces
           cerevisiae (strain YJM789) GN=FAR10 PE=4 SV=1
          Length = 478

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 141 VKPRSSYGFSVKQKTCNPSTLKAWSELEVGVYYLVFLILS 22
           + P+ +  FS+K   CN  TL  +  + +G+  +VF ILS
Sbjct: 437 MNPKGTDKFSIKNTLCNHFTLLTFGTISIGIIAIVFKILS 476


>tr|B1L0Y3|B1L0Y3_CLOBM Formate acetyltransferase OS=Clostridium
           botulinum (strain Loch Maree / Type A3) GN=CLK_2581 PE=4
           SV=1
          Length = 787

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +3

Query: 174 SRPVLRGLFASNLLDRHSTLLYDFTKACHSQIPLKHATVPCLPNMVKEVVPDYLSADKKN 353
           S PVLR L    L++R    +YD       +     AT P  P +    V D+   DK+ 
Sbjct: 40  SIPVLRALVLRELMERKELCIYDGELIVGERGEAAAAT-PTYPELCCHTVEDFDIMDKRE 98

Query: 354 RTSQRVTTKEQISLEEL 404
           + S + T +++   EEL
Sbjct: 99  KISFKTTDEDKEIQEEL 115