BP919299
Clone id YMU001_000123_E01
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCGTGCACACGCTGCTTCGTCTCTCAAGCACAAAGTTTGTTTTGTTATAACATTGTGTA
CAATGAATTCTTTGCGTCCTTAGGATTGTACTCCAAGTCTCAGCCGCCAAGCTTTACAGC
TGGTGTCAAAGTCAGCTAATGAAAGGAGCAAATGGCCCCTAGGGTCCAGTTGAAATTGAT
TGAGGTGTTGGTGAATGCTGCAGTTCCTCATCTTTGTCCGTGTTGTGAGGGACTTTGTAC
AGATTGTGTACCACAGAAAGCGATGCAAAGAATAGGGTAAGGCACACAACTTCAGAATCC
AGATTGAGACATATGTTCATATATTGCTCTCTGCTGCATTGGTAAGGCATTTGTGCTTCT
ATCCAATTTGGTTAGAAAAGCACTTAGAAAAGGGAGGAGCTTTGCAGTGTGGTTTTGGAA
ACGTAGACATGTAAGGGCTCTTGGTGTCTTTTAATTAACAAACAAATATACTGCACCATG
GAGTGGGATAAAACAATGCTCCTCTTAGAGAGGTCTCTTGAAGATTTTTGAATTAACAGG
TGCATTGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919299|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_E01.
(548 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B0U335
Definition tr|B0U335|B0U335_XYLFM Putative uncharacterized protein OS=Xylella fastidiosa (strain M12)
Align length 35
Score (bit) 33.9
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919299|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_E01.
(548 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0U335|B0U335_XYLFM Putative uncharacterized protein OS=Xylel... 34 5.8
tr|B0U317|B0U317_XYLFM Putative uncharacterized protein OS=Xylel... 34 5.8
tr|Q3RBX3|Q3RBX3_XYLFA Phage-related protein OS=Xylella fastidio... 34 5.8
tr|Q3R5Q4|Q3R5Q4_XYLFA Phage-related protein OS=Xylella fastidio... 34 5.8
tr|B8CCU5|B8CCU5_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.8

>tr|B0U335|B0U335_XYLFM Putative uncharacterized protein OS=Xylella
fastidiosa (strain M12) GN=Xfasm12_1332 PE=4 SV=1
Length = 223

Score = 33.9 bits (76), Expect = 5.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2

Query: 143 KEQMAPRVQLKLIEVLVNAAV-----PHLCPCCEG 232
K Q+ P+ L+++ VLV A V P LCPCC G
Sbjct: 123 KAQLWPQATLEMLPVLVAAVVDELSTPQLCPCCHG 157


>tr|B0U317|B0U317_XYLFM Putative uncharacterized protein OS=Xylella
fastidiosa (strain M12) GN=Xfasm12_1313 PE=4 SV=1
Length = 232

Score = 33.9 bits (76), Expect = 5.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2

Query: 143 KEQMAPRVQLKLIEVLVNAAV-----PHLCPCCEG 232
K Q+ P+ L+++ VLV A V P LCPCC G
Sbjct: 123 KAQLWPQATLEMLPVLVAAVVDELSTPQLCPCCHG 157


>tr|Q3RBX3|Q3RBX3_XYLFA Phage-related protein OS=Xylella fastidiosa
Dixon GN=XfasaDRAFT_0035 PE=4 SV=1
Length = 232

Score = 33.9 bits (76), Expect = 5.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2

Query: 143 KEQMAPRVQLKLIEVLVNAAV-----PHLCPCCEG 232
K Q+ P+ L+++ VLV A V P LCPCC G
Sbjct: 123 KAQLWPQATLEMLPVLVAAVVDELSTPQLCPCCHG 157


>tr|Q3R5Q4|Q3R5Q4_XYLFA Phage-related protein OS=Xylella fastidiosa
Ann-1 GN=XfasoDRAFT_2408 PE=4 SV=1
Length = 232

Score = 33.9 bits (76), Expect = 5.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2

Query: 143 KEQMAPRVQLKLIEVLVNAAV-----PHLCPCCEG 232
K Q+ P+ L+++ VLV A V P LCPCC G
Sbjct: 123 KAQLWPQATLEMLPVLVAAVVDELSTPQLCPCCHG 157


>tr|B8CCU5|B8CCU5_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_24936 PE=4 SV=1
Length = 1072

Score = 33.1 bits (74), Expect = 9.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2

Query: 241 CTKSLTTRTKMRNCSIHQHLNQFQLDPRGHLLLSLAD 131
CT T +RN S +QHL QLDP+ + LS AD
Sbjct: 257 CTSLYQTHRSLRNASFYQHLQ--QLDPKDGIRLSSAD 291