BP919296
Clone id YMU001_000123_D10
Library
Length 448
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGTCAATCAATCATTGTGTATGACAGATAGGCCGGCCCCTTTTTGGTTGACTTAAAACC
CTGCATACCTTAACCTATCTTAAAAATGCCTCTACCTGCTTTGTATTTGCACGTAGTTGG
ATACAGTGGTACTTTCATAACCAACCTCTGTTTACTTAAACTTTCCACTCGTATGACACA
GTTAACAACCTACTGACGACAGGACTTACACCCCACCTTACAATTTAATCCTCCCAAGGT
TCATTTATCAGGTTTAGCCTATGATAAATCGCACCAATTTTATAGCTTGTCTTCGCTTTT
TGCCTCGCTAGGCTAGGTTGGTGTCTGGTACTAAGATAGCCTTGACCTCATAAAAACTCT
AATCCTAAGCATAGTTAACCTTGCCCCCATAACCCCAAGTTTCTATTAAGCTAAACGTTT
GCTTCCACCAGACTCTTGGCCCAAACCT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919296|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D10.
(448 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B7VTB2
Definition tr|B7VTB2|B7VTB2_VIBSP Permease of the drug/metabolite transporter OS=Vibrio splendidus LGP32
Align length 38
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919296|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D10.
(448 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7VTB2|B7VTB2_VIBSP Permease of the drug/metabolite transport... 34 4.2
tr|A3XS46|A3XS46_9VIBR Putative membrane protein OS=Vibrio sp. M... 34 4.2
tr|A3UQL1|A3UQL1_VIBSP Putative membrane protein OS=Vibrio splen... 33 9.4
tr|Q2FQ34|Q2FQ34_METHJ Type I phosphodiesterase/nucleotide pyrop... 33 9.4

>tr|B7VTB2|B7VTB2_VIBSP Permease of the drug/metabolite transporter
OS=Vibrio splendidus LGP32 GN=VS_II1366 PE=4 SV=1
Length = 305

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2

Query: 189 VVNCVIRVESLSKQRLVMKVPLYPTTCKYKAGRGIFKI 76
+++C I E LS+Q L+M +PL KA RGIFK+
Sbjct: 258 LISCYINGEVLSEQSLLMMIPLLCGILLTKAPRGIFKL 295


>tr|A3XS46|A3XS46_9VIBR Putative membrane protein OS=Vibrio sp.
MED222 GN=MED222_11033 PE=4 SV=1
Length = 305

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2

Query: 189 VVNCVIRVESLSKQRLVMKVPLYPTTCKYKAGRGIFKI 76
+++C I E LS+Q L+M +PL KA RGIFK+
Sbjct: 258 LISCYINGEVLSEQSLLMMIPLLCGILLTKAPRGIFKL 295


>tr|A3UQL1|A3UQL1_VIBSP Putative membrane protein OS=Vibrio
splendidus 12B01 GN=V12B01_19266 PE=4 SV=1
Length = 305

Score = 32.7 bits (73), Expect = 9.4
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -2

Query: 189 VVNCVIRVESLSKQRLVMKVPLYPTTCKYKAGRGIFKI 76
+++C I E LS+Q L+M +PL KA +GIFK+
Sbjct: 258 LISCYINGEVLSEQSLLMMIPLLCGILLTKAPKGIFKL 295


>tr|Q2FQ34|Q2FQ34_METHJ Type I phosphodiesterase/nucleotide
pyrophosphatase OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=Mhun_0653 PE=3 SV=1
Length = 303

Score = 32.7 bits (73), Expect = 9.4
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1

Query: 169 SYDTVNNLLTTGLTPHLTI*SSQGSFIRFSL 261
S DT+ NLL TG PHL+ GSFI S+
Sbjct: 46 SKDTLQNLLETGSLPHLSSLLKNGSFINISI 76