BP919294 |
Clone id |
YMU001_000123_D08 |
Library |
YMU01 |
Length |
374 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_D08. |
Accession |
BP919294 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTGATTCATCCTCTTTGTTATGCCCATCAATGGTCCTTCGAAACTGTTTTGGAGAAACTT CTTAAACTTTTTCCATTTGAATGGACCATAAGTAGTTTGATCATATTCCTCCAAGAGGTT GTTCAGTACCTCAAGAACTTGACCAAGAGTTACTTCTGGAGCCTGACAAACAGCCCAAAG TTTCTCATCCATCTTTTCCACAGTCTTGACACACTTCATTTCAGCCTCCATGCCAATTTT ATGCATGTTTTCCTCATAACTTCTTTTAAAAGCTACCATGAGTACTTTCTCGTACTTTTG CCTTGCTGCACCGGCTCCAACAGCCTCACTGTTATAAACATTCAAAGCATCCTCCACAGC AGCATCATGGATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P20679 |
Definition |
sp|P20679|NU5M_PODAN NADH-ubiquinone oxidoreductase chain 5 OS=Podospora anserina |
Align length |
75 |
Score (bit) |
30.4 |
E-value |
2.8 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919294|Adiantum capillus-veneris mRNA, clone: YMU001_000123_D08. (374 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P20679|NU5M_PODAN NADH-ubiquinone oxidoreductase chain 5 OS=P... 30 2.8 sp|Q9QZ15|CLC4A_MOUSE C-type lectin domain family 4 member A OS=... 30 2.8 sp|Q9PQM4|SYV_UREPA Valyl-tRNA synthetase OS=Ureaplasma parvum G... 30 3.7 sp|Q50JE5|ACE_MESAU Angiotensin-converting enzyme OS=Mesocricetu... 30 3.7 sp|Q5Y4Z2|T2R42_PANPA Taste receptor type 2 member 42 OS=Pan pan... 30 4.9 sp|A1VEK0|PLSX_DESVV Fatty acid/phospholipid synthesis protein p... 30 4.9 sp|Q72CS5|PLSX_DESVH Fatty acid/phospholipid synthesis protein p... 30 4.9 sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1... 30 4.9 sp|Q6MW04|MED19_NEUCR Mediator of RNA polymerase II transcriptio... 29 6.3 sp|Q5BC23|SWF1_EMENI Palmitoyltransferase swf1 OS=Emericella nid... 29 8.3
>sp|P20679|NU5M_PODAN NADH-ubiquinone oxidoreductase chain 5 OS=Podospora anserina GN=ND5 PE=3 SV=1 Length = 652
Score = 30.4 bits (67), Expect = 2.8 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%) Frame = +1
Query: 4 IHPLCYAHQWSFET--VLEKLLKLFPFEWTISSLII------FLQEVVQYLKNLTKSYFW 159 IHP H+ +T + L KL PF +TIS II FL E+V Y K Y Sbjct: 493 IHP---THEIMIDTEFAVPVLFKLLPFIFTISFSIIALTISEFLSELVIYFKLSRLGYNI 549
Query: 160 SLTNSPKFLIHLFHS 204 + +FLI LF++ Sbjct: 550 FGFFNQRFLIELFYN 564
>sp|Q9QZ15|CLC4A_MOUSE C-type lectin domain family 4 member A OS=Mus musculus GN=Clec4a PE=1 SV=1 Length = 238
Score = 30.4 bits (67), Expect = 2.8 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -3
Query: 300 QKYEKVLMVAFKRSYEENMHKIGMEAEMKCVKTVEKMDEKLWAVC 166 QKY ++L K++ + MH E+ C K+V M++K+W+ C Sbjct: 70 QKYSQLLEE--KKAAKNIMHN-----ELNCTKSVSPMEDKVWSCC 107
>sp|Q9PQM4|SYV_UREPA Valyl-tRNA synthetase OS=Ureaplasma parvum GN=valS PE=3 SV=1 Length = 874
Score = 30.0 bits (66), Expect = 3.7 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Frame = +1
Query: 82 WTISSLIIFLQEVVQYLKNLTKSYF-----WSLTNSPKFLIHLFHSLDTLHFSLHANFMH 246 W I+ I L E+ L F W LT K + + ++D + + +++ Sbjct: 578 WNIAKYIENLDEINDNLNFEDVDKFCDVNKWILTELSKLTLEINKNMDKYNLVVATKYLY 637
Query: 247 VFLITSFKSYH-EYFLVLLPCCTGSNSLTVINIQSILHSSIM 369 F+ +F SY+ EY VLL T N T+ I+ + + ++ Sbjct: 638 DFIWNTFASYYLEYTKVLLQDLTLKNE-TIKTIRYVFNKILI 678
>sp|Q50JE5|ACE_MESAU Angiotensin-converting enzyme OS=Mesocricetus auratus GN=Ace PE=2 SV=1 Length = 1314
Score = 30.0 bits (66), Expect = 3.7 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%) Frame = +1
Query: 142 TKSYFWSLTNSPKF---LIHLFHSLDTLHFSLHA 234 T +Y+ S +SP F L HL+H L+ L+ +LHA Sbjct: 229 TGAYWRSAYDSPSFEETLEHLYHQLEPLYLNLHA 262
>sp|Q5Y4Z2|T2R42_PANPA Taste receptor type 2 member 42 OS=Pan paniscus GN=TAS2R42 PE=3 SV=1 Length = 314
Score = 29.6 bits (65), Expect = 4.9 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 23/108 (21%) Frame = +1
Query: 43 TVLEKLLKL---FPFEWTISSLIIFLQEVVQYLKNLTKSYFWSLTNSPK----------- 180 ++L+ LL L PF +++SL+ F +V++ +NL S S +S + Sbjct: 179 SILKTLLSLTSFIPFSLSLTSLLFFFLSLVRHTRNLKLSSLGSRDSSTEAHRRAMKMVMS 238
Query: 181 ----FLIHLF--HSLDTLHFSLHANFMHVF---LITSFKSYHEYFLVL 297 F++H F + + F L N F + +F S H + L+L Sbjct: 239 FLFLFIVHFFSLQVANWIFFMLWNNKYIKFAMLALNAFPSCHSFILIL 286
>sp|A1VEK0|PLSX_DESVV Fatty acid/phospholipid synthesis protein plsX OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=plsX PE=3 SV=1 Length = 345
Score = 29.6 bits (65), Expect = 4.9 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = -3
Query: 309 AARQKYEKVLMVAFKRSYEENMHKI---GMEAEMKCVKTVEKMDEK 181 AAR++ KVL+V ++ EE + +I G+E E+ V MDEK Sbjct: 27 AARERGLKVLLVGDRQKVEEELARIPLDGVEVEVVHASEVAGMDEK 72
>sp|Q72CS5|PLSX_DESVH Fatty acid/phospholipid synthesis protein plsX OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=plsX PE=3 SV=1 Length = 345
Score = 29.6 bits (65), Expect = 4.9 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = -3
Query: 309 AARQKYEKVLMVAFKRSYEENMHKI---GMEAEMKCVKTVEKMDEK 181 AAR++ KVL+V ++ EE + +I G+E E+ V MDEK Sbjct: 27 AARERGLKVLLVGDRQKVEEELARIPLDGVEVEVVHASEVAGMDEK 72
>sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1 OS=Gallus gallus GN=CLIP1 PE=2 SV=1 Length = 1433
Score = 29.6 bits (65), Expect = 4.9 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Frame = -3
Query: 369 HDAAVEDALNVYNSEAVGAGAARQKYEKVLMVAFKRSYEENMHKIGMEAE---MKCVKTV 199 H A+E+ L V ++ VGA A K M K YE M + ++ E + +K + Sbjct: 624 HQQAMEE-LKVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEI 682
Query: 198 EKMDEKLWAVCQAPEVTL 145 E + KL V + E TL Sbjct: 683 EALKAKLLEVTEEKEQTL 700
>sp|Q6MW04|MED19_NEUCR Mediator of RNA polymerase II transcription subunit 19 OS=Neurospora crassa GN=rox-3 PE=3 SV=3 Length = 333
Score = 29.3 bits (64), Expect = 6.3 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = -3
Query: 354 EDALNVYNSEAVGAGAARQKYEKVLMVAFKRSYEENMHKIGMEAEMKCVKTVEKMDEKLW 175 ED +Y + A AR K + A +++Y+ ++ K+G++ VKT EK E+L Sbjct: 118 EDLFEMYGLADLAAEYARIKDGQ--KNALRKTYKGHIKKLGVQGHFDSVKTDEKDPERLE 175
Query: 174 AVCQAPE 154 + P+ Sbjct: 176 YLMGCPQ 182
>sp|Q5BC23|SWF1_EMENI Palmitoyltransferase swf1 OS=Emericella nidulans GN=swf1 PE=3 SV=1 Length = 412
Score = 28.9 bits (63), Expect = 8.3 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 8/84 (9%) Frame = +1
Query: 97 LIIFLQEVVQYLKNLTKSYFWSLTNSP--------KFLIHLFHSLDTLHFSLHANFMHVF 252 +II L Y+ +TKSY ++ K + H HS +T HF A H Sbjct: 113 IIIALPYYFLYVSVVTKSYITPDNHAEEMKRYPYDKVIFHPGHSCETCHFLKPARSKHCS 172
Query: 253 LITSFKSYHEYFLVLLPCCTGSNS 324 S ++ + L C G N+ Sbjct: 173 YCKRCVSRQDHHCIWLTNCVGLNN 196
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SG17 |
Definition |
tr|A9SG17|A9SG17_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
122 |
Score (bit) |
107.0 |
E-value |
4.0e-22 |
Report |
|