BP919253
Clone id YMU001_000123_A02
Library
Length 363
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTGAAGATAATGGCAGATTACAATTGCTGAGACTAAACCCAAAAGTAAGTGA
CATCATTACGGTTCAAAAAGTTAAATTCAGCAGAGCAATAGCTGCTCATTCTACATCCAA
AACATGACTTTGAAAGTCACATACATCAAGCCTTCTGATAGACGTAGGTCAGGCCACATT
TGCCGCAGTAGTGGCGATCATGATGATTGGCCATGAAAGTTCCAGCTCCACATTCAGCAT
TTGGACACTCCTTCCGAAGTCGTTGCACCTTCCCAGAGTCATCCACCTTGTAGAATTGGA
GCACTGCAAGCTTTACCTTCTTCTTCTTATGCTTGAGCTTTTTGGGCTTGGTGTAAGTCT
TCT
■■Homology search results ■■ -
sp_hit_id P62981
Definition sp|P62981|RS27A_SOLTU 40S ribosomal protein S27a OS=Solanum tuberosum
Align length 54
Score (bit) 114.0
E-value 1.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919253|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A02.
(353 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P62981|RS27A_SOLTU 40S ribosomal protein S27a OS=Solanum tube... 114 1e-25
sp|P62980|RS27A_SOLLC 40S ribosomal protein S27a OS=Solanum lyco... 114 1e-25
sp|P47905|RS27A_LUPAL 40S ribosomal protein S27a OS=Lupinus albu... 114 2e-25
sp|P31753|RS27A_ASPOF 40S ribosomal protein S27a OS=Asparagus of... 112 7e-25
sp|P59232|R27AB_ARATH 40S ribosomal protein S27a-2 OS=Arabidopsi... 109 5e-24
sp|P59233|R27AC_ARATH 40S ribosomal protein S27a-3 OS=Arabidopsi... 108 6e-24
sp|P22277|RS27A_HORVU 40S ribosomal protein S27a OS=Hordeum vulg... 103 2e-22
sp|P51431|RS27A_ORYSJ 40S ribosomal protein S27a OS=Oryza sativa... 101 1e-21
sp|P27923|RS27A_MAIZE 40S ribosomal protein S27a OS=Zea mays GN=... 101 1e-21
sp|P59271|R27AA_ARATH 40S ribosomal protein S27a-1 OS=Arabidopsi... 100 4e-21
sp|P59272|RS27A_DAUCA 40S ribosomal protein S27a (Fragment) OS=D... 93 4e-19
sp|P79781|RS27A_CHICK 40S ribosomal protein S27a OS=Gallus gallu... 91 2e-18
sp|P62979|RS27A_HUMAN 40S ribosomal protein S27a OS=Homo sapiens... 91 2e-18
sp|P62978|RS27A_CAVPO 40S ribosomal protein S27a OS=Cavia porcel... 91 2e-18
sp|P62992|RS27A_BOVIN 40S ribosomal protein S27a OS=Bos taurus G... 91 2e-18
sp|P68200|RS27A_ICTPU 40S ribosomal protein S27a OS=Ictalurus pu... 89 5e-18
sp|P15357|RS27A_DROME 40S ribosomal protein S27a OS=Drosophila m... 89 5e-18
sp|P62982|RS27A_RAT 40S ribosomal protein S27a OS=Rattus norvegi... 89 7e-18
sp|P62983|RS27A_MOUSE 40S ribosomal protein S27a OS=Mus musculus... 89 7e-18
sp|P14799|RS27A_NEUCR 40S ribosomal protein S27a OS=Neurospora c... 85 1e-16
sp|P69061|RS27A_KLULA 40S ribosomal protein S27a OS=Kluyveromyce... 79 9e-15
sp|P68202|RS27A_PLUXY 40S ribosomal protein S27a OS=Plutella xyl... 78 1e-14
sp|P68203|RS27A_SPOFR 40S ribosomal protein S27a OS=Spodoptera f... 78 2e-14
sp|P29504|RS27A_MANSE 40S ribosomal protein S27a OS=Manduca sext... 78 2e-14
sp|P0C8R3|RS27B_SCHPO 40S ribosomal protein S27b OS=Schizosaccha... 76 6e-14
sp|P0C016|RS27A_SCHPO 40S ribosomal protein S27a OS=Schizosaccha... 76 6e-14
sp|P37164|RS27A_CAEBR 40S ribosomal protein S27a OS=Caenorhabdit... 75 1e-13
sp|P37165|RS27A_CAEEL 40S ribosomal protein S27a OS=Caenorhabdit... 74 2e-13
sp|P05759|RS37_YEAST 40S ribosomal protein S31 OS=Saccharomyces ... 74 2e-13
sp|P14797|RS27A_DICDI 40S ribosomal protein S27a OS=Dictyosteliu... 70 3e-12

>sp|P62981|RS27A_SOLTU 40S ribosomal protein S27a OS=Solanum
tuberosum GN=UBI3 PE=3 SV=1
Length = 80

Score = 114 bits (286), Expect = 1e-25
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVY KA
Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKA 77


>sp|P62980|RS27A_SOLLC 40S ribosomal protein S27a OS=Solanum
lycopersicum GN=UBI3 PE=3 SV=1
Length = 80

Score = 114 bits (286), Expect = 1e-25
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVY KA
Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKA 77


>sp|P47905|RS27A_LUPAL 40S ribosomal protein S27a OS=Lupinus albus
PE=3 SV=1
Length = 79

Score = 114 bits (284), Expect = 2e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPN ECGAGTFMANH DRHYCGKCG TYVYQKA
Sbjct: 24 LAVLQFYKVDDSGKVQRLRKECPNTECGAGTFMANHFDRHYCGKCGKTYVYQKA 77


>sp|P31753|RS27A_ASPOF 40S ribosomal protein S27a OS=Asparagus
officinalis PE=3 SV=1
Length = 78

Score = 112 bits (279), Expect = 7e-25
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQK 142
LAVLQFYKVDD+GKV RLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQK
Sbjct: 24 LAVLQFYKVDDTGKVIRLRKECPNAECGAGTFMANHKDRHYCGKCGLTYVYQK 76


>sp|P59232|R27AB_ARATH 40S ribosomal protein S27a-2 OS=Arabidopsis
thaliana GN=UBQ6 PE=3 SV=1
Length = 81

Score = 109 bits (272), Expect = 5e-24
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQK 142
LAVLQFYKVD SGKVQRLRKECPNA CGAGTFMA+H DRHYCGKCGLTYVYQK
Sbjct: 24 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQK 76


>sp|P59233|R27AC_ARATH 40S ribosomal protein S27a-3 OS=Arabidopsis
thaliana GN=UBQ5 PE=3 SV=1
Length = 81

Score = 108 bits (271), Expect = 6e-24
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQK 142
LAVLQFYK+D SGKVQRLRKECPNA CGAGTFMA+H DRHYCGKCGLTYVYQK
Sbjct: 24 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQK 76


>sp|P22277|RS27A_HORVU 40S ribosomal protein S27a OS=Hordeum vulgare
GN=MUB1 PE=3 SV=1
Length = 79

Score = 103 bits (258), Expect = 2e-22
Identities = 50/56 (89%), Positives = 52/56 (92%), Gaps = 2/56 (3%)
Frame = -3

Query: 300 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVY-QKA 139
LAVLQFYKVDD+ GKV RLRKECPNA+CGAGTFMANH DRHYCGKCGLTYVY QKA
Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79


>sp|P51431|RS27A_ORYSJ 40S ribosomal protein S27a OS=Oryza sativa
subsp. japonica GN=UBQ6 PE=3 SV=2
Length = 79

Score = 101 bits (252), Expect = 1e-21
Identities = 49/56 (87%), Positives = 51/56 (91%), Gaps = 2/56 (3%)
Frame = -3

Query: 300 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVY-QKA 139
LAVLQFYKVDD+ GKV RLRKECPN +CGAGTFMANH DRHYCGKCGLTYVY QKA
Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79


>sp|P27923|RS27A_MAIZE 40S ribosomal protein S27a OS=Zea mays
GN=UBF9 PE=3 SV=1
Length = 79

Score = 101 bits (252), Expect = 1e-21
Identities = 49/56 (87%), Positives = 50/56 (89%), Gaps = 2/56 (3%)
Frame = -3

Query: 300 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVY-QKA 139
LAVLQFYKVDD+ GKV RLRKECPN ECGAG FMANH DRHYCGKCGLTYVY QKA
Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA 79


>sp|P59271|R27AA_ARATH 40S ribosomal protein S27a-1 OS=Arabidopsis
thaliana GN=UBQ15 PE=1 SV=1
Length = 80

Score = 99.8 bits (247), Expect = 4e-21
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVD SGKVQRL+KECP+ CG GTFMA+H DRHYCGKCG TYV++KA
Sbjct: 24 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 77


tr_hit_id O04829
Definition tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tuberosum
Align length 54
Score (bit) 117.0
E-value 2.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919253|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A02.
(353 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tu... 117 2e-25
tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medic... 117 2e-25
tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Zizip... 117 2e-25
tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Popul... 117 2e-25
tr|A7Q059|A7Q059_VITVI Chromosome chr8 scaffold_41, whole genome... 117 2e-25
tr|A5B102|A5B102_VITVI Putative uncharacterized protein OS=Vitis... 117 2e-25
tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromos... 117 2e-25
tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea bras... 117 3e-25
tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arach... 117 4e-25
tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromos... 116 5e-25
tr|Q84XC3|Q84XC3_MALDO Ubiquitin/ribosomal fusion protein OS=Mal... 116 6e-25
tr|Q45FL8|Q45FL8_TOBAC Ubiquitin extension protein OS=Nicotiana ... 116 6e-25
tr|Q2QDG1|Q2QDG1_GOSHI Ubiquitin extension protein OS=Gossypium ... 116 6e-25
tr|Q6UCJ3|Q6UCJ3_CUCSA Ubiquitin extension protein OS=Cucumis sa... 115 8e-25
tr|Q5EC25|Q5EC25_NICBE Ubiquitin/s27a 40S ribosomal protein OS=N... 115 8e-25
tr|O49906|O49906_TOBAC Ubiquitin extension protein OS=Nicotiana ... 115 8e-25
tr|A9T8M3|A9T8M3_PHYPA Predicted protein OS=Physcomitrella paten... 115 8e-25
tr|A0MKC8|A0MKC8_CAPAN Ubiquitin extension protein OS=Capsicum a... 115 8e-25
tr|B7FH93|B7FH93_MEDTR Putative uncharacterized protein OS=Medic... 115 1e-24
tr|B3TLP8|B3TLP8_ELAGV Ubiquitin extension protein-like protein ... 115 1e-24
tr|A9P8M2|A9P8M2_POPTR Putative uncharacterized protein OS=Popul... 115 1e-24
tr|Q8W217|Q8W217_PYRCO Ubiquitin extension protein OS=Pyrus comm... 114 2e-24
tr|A9YTY9|A9YTY9_SOLTU Putative ubiquitin extension protein OS=S... 114 2e-24
tr|A9S8F4|A9S8F4_PHYPA Predicted protein OS=Physcomitrella paten... 114 2e-24
tr|A9RJI9|A9RJI9_PHYPA Predicted protein OS=Physcomitrella paten... 114 2e-24
tr|Q9FUL5|Q9FUL5_PRUAV Ubiquitin/ribosomal protein 27a OS=Prunus... 114 3e-24
tr|B8LKJ2|B8LKJ2_PICSI Putative uncharacterized protein OS=Picea... 113 4e-24
tr|Q0MW35|Q0MW35_9ROSA Ubiquitin extension protein OS=Morus bomb... 111 2e-23
tr|Q5I6U1|Q5I6U1_NICBE Ubiquitin/s27a 40s ribosomal protein OS=N... 110 3e-23
tr|Q9ARZ9|Q9ARZ9_ORYSJ cDNA clone:001-043-B08, full insert seque... 104 2e-21

>tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum
tuberosum PE=2 SV=1
Length = 156

Score = 117 bits (294), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 155

Score = 117 bits (294), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Ziziphus
jujuba GN=UBQ PE=2 SV=1
Length = 156

Score = 117 bits (294), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 156

Score = 117 bits (294), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|A7Q059|A7Q059_VITVI Chromosome chr8 scaffold_41, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027151001
PE=4 SV=1
Length = 156

Score = 117 bits (294), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|A5B102|A5B102_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_036195 PE=4 SV=1
Length = 156

Score = 117 bits (294), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromosome
chr7 scaffold_42, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00028185001 PE=4 SV=1
Length = 156

Score = 117 bits (294), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea
brasiliensis GN=UEP1 PE=2 SV=1
Length = 156

Score = 117 bits (293), Expect = 3e-25
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LA+LQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAILQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arachis
hypogaea PE=2 SV=1
Length = 155

Score = 117 bits (292), Expect = 4e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LA+LQFYK+DDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAILQFYKIDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromosome
undetermined scaffold_174, whole genome shotgun
sequence) OS=Vitis vinifera GN=GSVIVT00006610001 PE=4
SV=1
Length = 156

Score = 116 bits (291), Expect = 5e-25
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = -3

Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139
LAVLQFYKVDDSGKVQRLRKECPN+ECGAGTFMANH DRHYCGKCGLTYVYQKA
Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNSECGAGTFMANHFDRHYCGKCGLTYVYQKA 153