BP919198
Clone id YMU001_000122_D03
Library
Length 439
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATAACGCATAGAGCATTTTGCGATGCCCTGGCGGAGGAGAGCGCACTCAGAGTGCAGAG
CCAAATTACGGGGGGCCACTTAGGAGGAGATCACCACCACTTGCCCAGCACCCTCTCTAG
CGCAGTGGCAGCGCAGCTCGCACAGGTTAGCGGTGCCTCTGCATATGGCGGCATTCTTGG
CGGCGCAGCCAACTCTGGCCTGCCCTCCAAAGGAAGCAGCTTGCTTGATCATATGTCCCC
TTTTGACAACCCTCTTATGAATGCAGCCTCCTCTTCATCAGCTGGCCGTGCTAATAGGCT
GCCCCTTTGGCTCTCTGCAGCAGCTGCTGCTGGTGACCACCATCAACTCCTCTCTGTTAG
CCCTAACCCCAATAATATCCCCTTCCATCCCTCCTTTTTGAGCTCCTTTCAGACCAATGC
CTCCTCTGTCAACAGTCTC
■■Homology search results ■■ -
sp_hit_id Q9FFH3
Definition sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana
Align length 15
Score (bit) 33.1
E-value 0.52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919198|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_D03.
(439 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsi... 33 0.52
sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis th... 33 0.52
sp|P91766|ACH1_MANSE Acetylcholine receptor subunit alpha-like O... 32 0.88
sp|A2T7E6|ZBT32_PANTR Zinc finger and BTB domain-containing prot... 32 1.2
sp|A1YGK1|ZBT32_PANPA Zinc finger and BTB domain-containing prot... 32 1.2
sp|Q9Y2Y4|ZBT32_HUMAN Zinc finger and BTB domain-containing prot... 32 1.5
sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis t... 31 2.0
sp|Q9ZQE5|PP153_ARATH Pentatricopeptide repeat-containing protei... 31 2.6
sp|Q9CYZ8|SSBP2_MOUSE Single-stranded DNA-binding protein 2 OS=M... 30 3.4
sp|P81877|SSBP2_HUMAN Single-stranded DNA-binding protein 2 OS=H... 30 3.4
sp|Q5T442|CXG2_HUMAN Gap junction gamma-2 protein OS=Homo sapien... 30 3.4
sp|Q9JKD9|ZBT32_MOUSE Zinc finger and BTB domain-containing prot... 30 5.7
sp|Q91685|MIX2_XENLA Homeobox protein Mix.2 OS=Xenopus laevis GN... 30 5.7
sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type... 30 5.7
sp|Q9P2P6|STAR9_HUMAN StAR-related lipid transfer protein 9 OS=H... 29 7.5
sp|Q9HCH0|K1602_HUMAN Uncharacterized protein KIAA1602 OS=Homo s... 29 7.5
sp|Q5RCJ1|CIP4_PONAB Cdc42-interacting protein 4 OS=Pongo abelii... 29 7.5
sp|Q15642|CIP4_HUMAN Cdc42-interacting protein 4 OS=Homo sapiens... 29 7.5
sp|P43167|YMP4_STRCO Uncharacterized protein in mprA 5'region (F... 29 9.8
sp|Q98948|SSBP3_CHICK Single-stranded DNA-binding protein 3 OS=G... 29 9.8
sp|Q9TU34|ITPR1_BOVIN Inositol 1,4,5-trisphosphate receptor type... 29 9.8

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis
thaliana GN=NUC PE=2 SV=1
Length = 466

Score = 33.1 bits (74), Expect = 0.52
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2

Query: 2 ITHRAFCDALAEESA 46
ITHRAFCDALAEE+A
Sbjct: 184 ITHRAFCDALAEETA 198


>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis
thaliana GN=MGP PE=1 SV=1
Length = 506

Score = 33.1 bits (74), Expect = 0.52
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2

Query: 2 ITHRAFCDALAEESA 46
ITHRAFCDALAEE+A
Sbjct: 188 ITHRAFCDALAEETA 202


>sp|P91766|ACH1_MANSE Acetylcholine receptor subunit alpha-like
OS=Manduca sexta GN=ARA1 PE=2 SV=1
Length = 516

Score = 32.3 bits (72), Expect = 0.88
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2

Query: 207 EGRPELAAPPRMPPYAEAPLTCASCA 130
EG P + APPR PP A CA+CA
Sbjct: 384 EGSPGVPAPPRPPPCAPPLAPCAACA 409


>sp|A2T7E6|ZBT32_PANTR Zinc finger and BTB domain-containing protein
32 OS=Pan troglodytes GN=ZBTB32 PE=3 SV=1
Length = 487

Score = 32.0 bits (71), Expect = 1.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2

Query: 287 RANRLPLWLSAAAAAGDHHQLLSVSPNPNNIPFHPSFLS 403
R +R+PL L+A +QL S SP P ++P P+ LS
Sbjct: 291 REHRIPLSLNAPKGLWSQNQLASSSPTPGSLPQGPAQLS 329


>sp|A1YGK1|ZBT32_PANPA Zinc finger and BTB domain-containing protein
32 OS=Pan paniscus GN=ZBTB32 PE=3 SV=1
Length = 487

Score = 32.0 bits (71), Expect = 1.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2

Query: 287 RANRLPLWLSAAAAAGDHHQLLSVSPNPNNIPFHPSFLS 403
R +R+PL L+A +QL S SP P ++P P+ LS
Sbjct: 291 REHRIPLSLNAPKGLWSQNQLASSSPTPGSLPQGPAQLS 329


>sp|Q9Y2Y4|ZBT32_HUMAN Zinc finger and BTB domain-containing protein
32 OS=Homo sapiens GN=ZBTB32 PE=1 SV=1
Length = 487

Score = 31.6 bits (70), Expect = 1.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2

Query: 287 RANRLPLWLSAAAAAGDHHQLLSVSPNPNNIPFHPSFLS 403
R R+PL L+A +QL S SP P ++P P+ LS
Sbjct: 291 REQRIPLSLNAPKGLWSQNQLASSSPTPGSLPQGPAQLS 329


>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis
thaliana GN=JKD PE=1 SV=1
Length = 503

Score = 31.2 bits (69), Expect = 2.0
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2

Query: 2 ITHRAFCDALAEESA 46
ITHRAFCDAL EE A
Sbjct: 201 ITHRAFCDALTEEGA 215


>sp|Q9ZQE5|PP153_ARATH Pentatricopeptide repeat-containing protein
At2g15690 OS=Arabidopsis thaliana GN=PCMP-H66 PE=2 SV=2
Length = 579

Score = 30.8 bits (68), Expect = 2.6
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2

Query: 284 GRANRLPL-WLSAAAAAGDHHQ-LLSVSPNPNNIPFHP-SFLSSFQTNAS 424
G N +P+ LS +AAA D+HQ S SP+ + P+ P SF S QTN +
Sbjct: 39 GTLNSIPIKHLSTSAAANDYHQNPQSGSPSQHQRPYPPQSFDSQNQTNTN 88


>sp|Q9CYZ8|SSBP2_MOUSE Single-stranded DNA-binding protein 2 OS=Mus
musculus GN=Ssbp2 PE=2 SV=1
Length = 361

Score = 30.4 bits (67), Expect = 3.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1

Query: 28 PGGGERT-QSAEPNYGGPLRRRSPPLAQHPL 117
P G + T Q PN GGP++R +PP PL
Sbjct: 157 PSGMDPTRQQGHPNMGGPMQRMTPPRGMVPL 187


>sp|P81877|SSBP2_HUMAN Single-stranded DNA-binding protein 2 OS=Homo
sapiens GN=SSBP2 PE=1 SV=2
Length = 361

Score = 30.4 bits (67), Expect = 3.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1

Query: 28 PGGGERT-QSAEPNYGGPLRRRSPPLAQHPL 117
P G + T Q PN GGP++R +PP PL
Sbjct: 157 PSGMDPTRQQGHPNMGGPMQRMTPPRGMVPL 187


tr_hit_id B6SS63
Definition tr|B6SS63|B6SS63_MAIZE Nucleic acid binding protein OS=Zea mays
Align length 15
Score (bit) 34.3
E-value 0.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919198|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_D03.
(439 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6SS63|B6SS63_MAIZE Nucleic acid binding protein OS=Zea mays ... 34 0.90
tr|B4WUN2|B4WUN2_9SYNE Cadmium-translocating P-type ATPase OS=Sy... 35 1.4
tr|Q9C722|Q9C722_ARATH Zinc finger protein, putative OS=Arabidop... 35 2.4
tr|Q8RX03|Q8RX03_ARATH Putative zinc finger protein OS=Arabidops... 35 2.4
tr|Q8H1F5|Q8H1F5_ARATH Putative zinc finger protein OS=Arabidops... 35 2.4
tr|Q5SMY2|Q5SMY2_ORYSJ Putative zinc finger protein ID1 (Putativ... 35 2.4
tr|Q2HVE6|Q2HVE6_MEDTR Zinc finger, C2H2-type OS=Medicago trunca... 35 2.4
tr|A7PUY6|A7PUY6_VITVI Chromosome chr4 scaffold_32, whole genome... 35 2.4
tr|A2WLN2|A2WLN2_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.4
tr|Q9SCQ6|Q9SCQ6_ARATH Zinc finger protein (At3g50700) OS=Arabid... 34 3.2
tr|Q9M3F1|Q9M3F1_ARATH Zinc finger protein OS=Arabidopsis thalia... 34 3.2
tr|Q9LVQ7|Q9LVQ7_ARATH Zinc finger protein OS=Arabidopsis thalia... 34 3.2
tr|Q944L3|Q944L3_ARATH AT3g45260/F18N11_20 (ID1-like zinc finger... 34 3.2
tr|Q10QG1|Q10QG1_ORYSJ Zinc finger, C2H2 type family protein, ex... 34 3.2
tr|O22759|O22759_ARATH Putative zinc finger protein OS=Arabidops... 34 3.2
tr|B8LP08|B8LP08_PICSI Putative uncharacterized protein OS=Picea... 34 3.2
tr|B8AQ36|B8AQ36_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.2
tr|A9T4T1|A9T4T1_PHYPA Predicted protein OS=Physcomitrella paten... 34 3.2
tr|A9SVP8|A9SVP8_PHYPA Predicted protein OS=Physcomitrella paten... 34 3.2
tr|A9S2M4|A9S2M4_PHYPA Predicted protein (Fragment) OS=Physcomit... 34 3.2
tr|A7PUH4|A7PUH4_VITVI Chromosome chr7 scaffold_31, whole genome... 34 3.2
tr|A7P6S4|A7P6S4_VITVI Chromosome chr9 scaffold_7, whole genome ... 34 3.2
tr|A7P4L5|A7P4L5_VITVI Chromosome chr4 scaffold_6, whole genome ... 34 3.2
tr|A7NZH2|A7NZH2_VITVI Chromosome chr6 scaffold_3, whole genome ... 34 3.2
tr|A5BN05|A5BN05_VITVI Putative uncharacterized protein OS=Vitis... 34 3.2
tr|A3AF45|A3AF45_ORYSJ Putative uncharacterized protein OS=Oryza... 34 3.2
tr|B4PL77|B4PL77_DROYA GE25231 OS=Drosophila yakuba GN=GE25231 P... 34 3.2
tr|B8PJA8|B8PJA8_9APHY Predicted protein OS=Postia placenta Mad-... 34 3.2
tr|Q7XEJ8|Q7XEJ8_ORYSJ Os10g0419200 protein OS=Oryza sativa subs... 33 5.4
tr|O65215|O65215_MAIZE Zinc finger protein ID1 OS=Zea mays GN=id... 33 5.4

>tr|B6SS63|B6SS63_MAIZE Nucleic acid binding protein OS=Zea mays
PE=2 SV=1
Length = 539

Score = 34.3 bits (77), Expect(2) = 0.90
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2

Query: 2 ITHRAFCDALAEESA 46
ITHRAFCDALAEESA
Sbjct: 175 ITHRAFCDALAEESA 189



Score = 21.2 bits (43), Expect(2) = 0.90
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1

Query: 55 AEPNYGGPLRRRSPPLAQH 111
A P PLR++ PP A H
Sbjct: 212 APPPAPAPLRQQPPPPAPH 230


>tr|B4WUN2|B4WUN2_9SYNE Cadmium-translocating P-type ATPase
OS=Synechococcus sp. PCC 7335 GN=S7335_445 PE=4 SV=1
Length = 647

Score = 35.4 bits (80), Expect = 1.4
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2

Query: 164 YGGILGGAANSGLPSKGSSLLDHMSPFDNPLMNXXXXXXXG--RANRLPLWLSAAAAAGD 337
Y G +GGAA G+ KGS LD ++ D + + G R N + A +
Sbjct: 308 YFGGIGGAAKRGILVKGSKFLDALTQVDTVVFDKTGTLTKGNFRVNEI-----VVANGLN 362

Query: 338 HHQLLSVSPNPNNIPFHPSFLSSFQTNASSVNS 436
HQLL ++ + HP S Q VNS
Sbjct: 363 EHQLLELAAQVESQSNHPVAQSIQQAYGKPVNS 395


>tr|Q9C722|Q9C722_ARATH Zinc finger protein, putative OS=Arabidopsis
thaliana GN=T7N22.5 PE=4 SV=1
Length = 439

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRVQSQI 67
ITHRAFCDALAEESA + + I
Sbjct: 195 ITHRAFCDALAEESARAMPNPI 216


>tr|Q8RX03|Q8RX03_ARATH Putative zinc finger protein OS=Arabidopsis
thaliana GN=At1g55110 PE=2 SV=1
Length = 455

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRVQSQI 67
ITHRAFCDALAEESA + + I
Sbjct: 211 ITHRAFCDALAEESARAMPNPI 232


>tr|Q8H1F5|Q8H1F5_ARATH Putative zinc finger protein OS=Arabidopsis
thaliana GN=At1g55110 PE=2 SV=1
Length = 455

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRVQSQI 67
ITHRAFCDALAEESA + + I
Sbjct: 211 ITHRAFCDALAEESARAMPNPI 232


>tr|Q5SMY2|Q5SMY2_ORYSJ Putative zinc finger protein ID1 (Putative
uncharacterized protein) (Os01g0195000 protein) OS=Oryza
sativa subsp. japonica GN=P0498B01.11 PE=4 SV=1
Length = 487

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRV 55
ITHRAFCDALAEESA V
Sbjct: 193 ITHRAFCDALAEESARAV 210


>tr|Q2HVE6|Q2HVE6_MEDTR Zinc finger, C2H2-type OS=Medicago
truncatula GN=MtrDRAFT_AC148918g5v2 PE=4 SV=1
Length = 480

Score = 34.7 bits (78), Expect = 2.4
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRVQSQIT 70
ITHRAFCDALAEES+ V Q T
Sbjct: 193 ITHRAFCDALAEESSRTVIPQPT 215


>tr|A7PUY6|A7PUY6_VITVI Chromosome chr4 scaffold_32, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024976001
PE=4 SV=1
Length = 292

Score = 34.7 bits (78), Expect = 2.4
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRVQSQ 64
ITHRAFCDALAEESA + Q+Q
Sbjct: 184 ITHRAFCDALAEESA-KTQTQ 203


>tr|A2WLN2|A2WLN2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00752 PE=4 SV=1
Length = 487

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRV 55
ITHRAFCDALAEESA V
Sbjct: 193 ITHRAFCDALAEESARAV 210


>tr|Q9SCQ6|Q9SCQ6_ARATH Zinc finger protein (At3g50700)
OS=Arabidopsis thaliana GN=At3g50700 PE=2 SV=1
Length = 452

Score = 34.3 bits (77), Expect = 3.2
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2

Query: 2 ITHRAFCDALAEESALRVQSQ 64
ITHRAFCDALAEE+A SQ
Sbjct: 181 ITHRAFCDALAEENARSHHSQ 201