BP919184 |
Clone id |
YMU001_000122_B11 |
Library |
YMU01 |
Length |
566 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_B11. |
Accession |
BP919184 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTTACATCAGGCATGTCTTTTCCCCATGCATCTTTGCGTACTTCCACACCTGGATTGCAA AGCACCATGAATGCAGTACATTGCTCGTTCTTATCAGTCCGGTCTCTACCATTCAAAGTC TTCTCATGCGCACTCATACTGCTCTTCCACGTGTTGCTTAGTCCCCTTCGACGAGGGGGG ACCCCTCGGCCATCCATCGCCCGGGTCCCCATTATCATGCATCAGTTGCGCGCTATCGTG CATCAAACGATCCTCGCACATTTCCACTCTCATTAGACCTCCTTCGACCTTATTGCAGGC TTGTATGGTGGGCTCATTAGCCCAAGGCAAGAGGCCAGCCCCGGCCGCCATCCGCAATTC GATGGCATCCCTTCGTGCCACATGTCATAGGTGCTCCGCATGTCATCCCCAATAAACTCA TACACCCTCCATCCGGTTGTAATGTGCCTGGGCACACATTCCAAGCAATCCACAAAGTGA GCACTCTCTGGCTCGACGAAGCACGTCCATTCACCTTCGTGTTGACCTTAGTCATGCTAT AAGCATCCTCCGTCTCTCCTCCCGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q61087 |
Definition |
sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus |
Align length |
25 |
Score (bit) |
33.1 |
E-value |
0.98 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6SEG1 |
Definition |
tr|B6SEG1|B6SEG1_9ACTO AlnO OS=Streptomyces sp. CM020 |
Align length |
52 |
Score (bit) |
35.0 |
E-value |
2.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919184|Adiantum capillus-veneris mRNA, clone: YMU001_000122_B11. (566 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6SEG1|B6SEG1_9ACTO AlnO OS=Streptomyces sp. CM020 GN=alnO PE... 35 2.9 tr|Q2GN01|Q2GN01_CHAGB Putative uncharacterized protein OS=Chaet... 35 2.9 tr|A1D2M6|A1D2M6_NEOFI Mucin, putative OS=Neosartorya fischeri (... 35 2.9 tr|A5FXC5|A5FXC5_ACICJ DegT/DnrJ/EryC1/StrS aminotransferase OS=... 34 6.4 tr|A8Y4J9|A8Y4J9_CAEBR Putative uncharacterized protein OS=Caeno... 34 6.4 tr|Q0CUT5|Q0CUT5_ASPTN Predicted protein OS=Aspergillus terreus ... 34 6.4 tr|Q30W21|Q30W21_DESDG Putative uncharacterized protein OS=Desul... 33 8.3 tr|Q4WKQ6|Q4WKQ6_ASPFU Kinesin family protein OS=Aspergillus fum... 33 8.3 tr|B0XRD0|B0XRD0_ASPFC Kinesin family protein OS=Aspergillus fum... 33 8.3 tr|A2QB61|A2QB61_ASPNC Catalytic activity: 4 Benzenediol + O2 = ... 33 8.3
>tr|B6SEG1|B6SEG1_9ACTO AlnO OS=Streptomyces sp. CM020 GN=alnO PE=4 SV=1 Length = 152
Score = 35.0 bits (79), Expect = 2.9 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 7/52 (13%) Frame = +3
Query: 390 GAPHVIP-------NKLIHPPSGCNVPGHTFQAIHKVSTLWLDEARPFTFVL 524 G+PHV+P + +I+ +V G + Q +++ LW DE PF+FVL Sbjct: 33 GSPHVVPVGVIMDGDDIIYTCQKDSVKGRSLQRDGRIAMLWDDERPPFSFVL 84
>tr|Q2GN01|Q2GN01_CHAGB Putative uncharacterized protein OS=Chaetomium globosum GN=CHGG_10653 PE=4 SV=1 Length = 2183
Score = 35.0 bits (79), Expect = 2.9 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = -2
Query: 436 PDGGCMSLLGMTCGAPMTCG----TKGCHRIADGGR 341 PDGGC L C AP+ CG T CHR+ D R Sbjct: 1089 PDGGCTEL----CDAPLKCGVHKCTSRCHRVVDHSR 1120
>tr|A1D2M6|A1D2M6_NEOFI Mucin, putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_013580 PE=4 SV=1 Length = 638
Score = 35.0 bits (79), Expect = 2.9 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 5/147 (3%) Frame = +3
Query: 78 TLLVLISPVSTIQSL-LMRTHTALPRVA*SPSTRGDPSAIHRPGPHYHASVARYRASNDP 254 T+ +I P ST+ + M + ALP V +P++ + PGP H S+ Sbjct: 406 TVPQIIPPASTLPATSAMTSLPALPPVI-TPTSVPSSHQAYIPGPIPHLPRPNLPVSSHT 464
Query: 255 RTFPLSLDLLRPYCRLVWWAH*PKARGQPRPP----SAIRWHPFVPHVIGAPHVIPNKLI 422 +S +P P G+ PP S+ W P VPH+ P V+ N + Sbjct: 465 LVPSISATTPQP----------PSTAGRAMPPATYSSSTTWAPSVPHMTTVPPVL-NGIY 513
Query: 423 HPPSGCNVPGHTFQAIHKVSTLWLDEA 503 H P PG + + +S+ + A Sbjct: 514 HTPISLPDPGRYHASPYGMSSATVSPA 540
>tr|A5FXC5|A5FXC5_ACICJ DegT/DnrJ/EryC1/StrS aminotransferase OS=Acidiphilium cryptum (strain JF-5) GN=Acry_1041 PE=4 SV=1 Length = 384
Score = 33.9 bits (76), Expect = 6.4 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Frame = +3
Query: 54 IAKHHECSTLLVLISPVST--------IQSLLMRTHTALPRVA*SPSTRGDPSAIHRPGP 209 IA+ ++ + V +PV I ++L+R A + RG PSA++ P P Sbjct: 269 IARRYDEALASVFATPVRVPESSSAWAIYAVLLRDGAAREAMQARLRARGVPSAVYYPKP 328
Query: 210 HYHASVARYRASNDPRTFPLSLDL 281 +H YRAS+D P+S D+ Sbjct: 329 LHHQPA--YRASHDGAALPVSEDV 350
>tr|A8Y4J9|A8Y4J9_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG23163 PE=4 SV=2 Length = 603
Score = 33.9 bits (76), Expect = 6.4 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +3
Query: 24 PCIFAYFHTWIAKHHECSTLLVLISPVSTIQSLLM 128 P F F H++CS++ +LISPV+TIQ L + Sbjct: 248 PVFFLVFSVATGYHNQCSSVDILISPVTTIQRLTL 282
>tr|Q0CUT5|Q0CUT5_ASPTN Predicted protein OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_02549 PE=4 SV=1 Length = 308
Score = 33.9 bits (76), Expect = 6.4 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Frame = +3
Query: 84 LVLISPVSTIQSLLMRTHTALPRVA*SPSTRGDPSAIHRPGPHYHASVARYRASNDPRTF 263 L L S +TI S + T++PR+ P T D A H PH S A +++ P T Sbjct: 149 LTLPSAPATITS----SSTSVPRL---PDTPADIGAAHSHPPHDSHSAASFQSFPPPSTL 201
Query: 264 PLSLDLLRPYCRLVWWAH*PKARGQPRP---PSAIRWHPFVPH---VIGAPHVIP 410 P ++ P ++ P P P P+ + P PH APH+ P Sbjct: 202 PSQSPVMPPQDVRDFYNQ-PSVPPTPAPAPAPAPVMPPPARPHAPAAAAAPHISP 255
>tr|Q30W21|Q30W21_DESDG Putative uncharacterized protein OS=Desulfovibrio desulfuricans (strain G20) GN=Dde_3331 PE=4 SV=1 Length = 318
Score = 33.5 bits (75), Expect = 8.3 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 5/111 (4%) Frame = +1
Query: 46 TPGLQSTMNAVHCSFLSVRS-LPFKVFSCALILLFHVLLSPLRRGGTPRPSIARVPIIMH 222 T G+ +T + + + R +P + S IL+F V + R PR + R + H Sbjct: 101 TTGVATTEDTAGATLIQTRHRIPEQPLSDGQILIFQVPIPEPLRWMEPRETETR-KMHAH 159
Query: 223 QLRAIVH----QTILAHFHSH*TSFDLIAGLYGGLISPRQEASPGRHPQFD 363 Q ++H + I H H TSFD Y L++ R ASP +P+FD Sbjct: 160 QEYGVMHVKLYEDIARHGHIA-TSFD-----YPVLVADRYIASPSPNPKFD 204
>tr|Q4WKQ6|Q4WKQ6_ASPFU Kinesin family protein OS=Aspergillus fumigatus GN=AFUA_1G01640 PE=3 SV=1 Length = 457
Score = 33.5 bits (75), Expect = 8.3 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = +3
Query: 357 IRWHPFVPHVIGAPHVIPNKLIHPPSGCNVPGHTFQAIHKVSTLWLDEARPFTFVLT 527 +RW P P P + + HP S + T HK+S W E+ FT + T Sbjct: 8 VRWRPLAPSEANTPEIARTQHAHPTSNTSALSLTPPPAHKLSRPWKSES-AFTRIFT 63
>tr|B0XRD0|B0XRD0_ASPFC Kinesin family protein OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_002040 PE=3 SV=1 Length = 457
Score = 33.5 bits (75), Expect = 8.3 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = +3
Query: 357 IRWHPFVPHVIGAPHVIPNKLIHPPSGCNVPGHTFQAIHKVSTLWLDEARPFTFVLT 527 +RW P P P + + HP S + T HK+S W E+ FT + T Sbjct: 8 VRWRPLAPSEANTPEIARTQHAHPTSNTSALSLTPPPAHKLSRPWKSES-AFTRIFT 63
>tr|A2QB61|A2QB61_ASPNC Catalytic activity: 4 Benzenediol + O2 = 4 Benzosemiquinone + 2 H2O. OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An01g14010 PE=3 SV=1 Length = 602
Score = 33.5 bits (75), Expect = 8.3 Identities = 27/65 (41%), Positives = 38/65 (58%) Frame = +3
Query: 96 SPVSTIQSLLMRTHTALPRVA*SPSTRGDPSAIHRPGPHYHASVARYRASNDPRTFPLSL 275 S VS+ +LL T T +P A +PS++ D + I R G HY+AS YR + +FPLSL Sbjct: 400 SLVSSNYTLLNET-TIMPFPAETPSSKVDATHILRIG-HYNAS---YRWTEGNSSFPLSL 454
Query: 276 DLLRP 290 + P Sbjct: 455 EAASP 459
|