BP919061 |
Clone id |
YMU001_000120_G06 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000120_G06. |
Accession |
BP919061 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCTTCTATTCTTTGAACAAAGATGATGATGACCGTGGCCAACACCACCAATAGCCAATA TAAACAAAGCAATTGAGAACAAGGACTGCAGCAGATACAAGGACCCCACAATGCCAAGGA TTGCTACACCTGCTTGCGCCACAGGCCTTGGCACCGACTCCTGCATTTACAAGGTACCAG CTTTGTTCCTGCATCTAATGCAGCAGATACAAGGACCCCACAATGCCAAGGATTGCTACA CCTGCTTGCGCCACAGGCCCTGGCACCGACTCCTGCATTTACAAGGTACCAGCTTTGTTC CTGCATCTAATGCATCTCTGGCAGTTTTAACCGCAACCGCAAATGCTTTGTATAAGTCGG GAGATTTCTGAGCAACAATCCGAAGAGAAGGAAGTGGCGTTCGCCTTGAGACCTGCTTGC ATTGGGAAGACTTCCAAGCTCCGCTCTGTAACGAAAGTGGTGACGACGGAGAACGGGATG GCAGAAGGGGGTAATGCAGTGCGTGCGAGACGCACCGGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9NYQ6 |
Definition |
sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens |
Align length |
47 |
Score (bit) |
34.7 |
E-value |
0.28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TEN6 |
Definition |
tr|A9TEN6|A9TEN6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
114 |
Score (bit) |
48.9 |
E-value |
0.0001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919061|Adiantum capillus-veneris mRNA, clone: YMU001_000120_G06. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TEN6|A9TEN6_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04 tr|Q2QU14|Q2QU14_ORYSJ Os12g0276100 protein OS=Oryza sativa subs... 44 0.005 tr|B8AZN5|B8AZN5_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A3CAK1|A3CAK1_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.006 tr|A9TW39|A9TW39_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.018 tr|A7QKS3|A7QKS3_VITVI Chromosome undetermined scaffold_114, who... 42 0.024 tr|A5C4R1|A5C4R1_VITVI Putative uncharacterized protein OS=Vitis... 42 0.024 tr|B6TR67|B6TR67_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.053 tr|Q9SVQ5|Q9SVQ5_ARATH Putative uncharacterized protein F17N18.1... 39 0.12 tr|Q6NLB6|Q6NLB6_ARATH At4g13220 OS=Arabidopsis thaliana GN=At4g... 39 0.15 tr|A9PJH6|A9PJH6_POPJC Putative uncharacterized protein OS=Popul... 37 0.59 tr|A8ISE2|A8ISE2_CHLRE SNF2 superfamily protein OS=Chlamydomonas... 35 2.9 tr|A8MUW4|A8MUW4_HUMAN Putative uncharacterized protein CELSR1 O... 35 2.9 tr|A8WZ45|A8WZ45_CAEBR CBR-CDF-1 protein OS=Caenorhabditis brigg... 33 6.5 tr|A0QTZ5|A0QTZ5_MYCS2 Lipopolysaccharide biosynthesis acyltrans... 33 6.5 tr|A7T3K5|A7T3K5_NEMVE Predicted protein (Fragment) OS=Nematoste... 28 7.8
>tr|A9TEN6|A9TEN6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169641 PE=4 SV=1 Length = 231
Score = 48.9 bits (115), Expect = 1e-04 Identities = 37/114 (32%), Positives = 50/114 (43%) Frame = -1
Query: 385 LRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPCKCRSRCQGLWRKQV*QSLALWGPCI 206 L++VA++ D+ KA VKT ++ALDAGT LVP Sbjct: 88 LKVVAEEKFDVAKAAGFLVKTGKNALDAGTNLVP-------------------------- 121
Query: 205 CCIRCRNKAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGG 44 ES+PR VA+ V ++G Y L++LFS ALFIL G Sbjct: 122 ---------------ESIPRGVARIIVGLVGASVVTYALRALFSTALFILVRSG 160
>tr|Q2QU14|Q2QU14_ORYSJ Os12g0276100 protein OS=Oryza sativa subsp. japonica GN=Os12g0276100 PE=2 SV=1 Length = 163
Score = 43.9 bits (102), Expect = 0.005 Identities = 34/123 (27%), Positives = 51/123 (41%) Frame = -1
Query: 409 SRRTPLPSLRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPCKCRSRCQGLWRKQV*QS 230 +RR L + +V + + A K RDA++AGT LVP Sbjct: 44 TRRPRLGTRLVVVSAQSNFSRVVQTAWKVGRDAVEAGTTLVP------------------ 85
Query: 229 LALWGPCICCIRCRNKAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAI 50 SVPRPVA+ GV + + +L+LL+S+ S A F+LA+ Sbjct: 86 -----------------------GSVPRPVARIGVTFVALSIALFLLKSVVSTAFFVLAM 122
Query: 49 GGV 41 G+ Sbjct: 123 MGL 125
>tr|B8AZN5|B8AZN5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19050 PE=4 SV=1 Length = 159
Score = 43.9 bits (102), Expect = 0.005 Identities = 34/123 (27%), Positives = 51/123 (41%) Frame = -1
Query: 409 SRRTPLPSLRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPCKCRSRCQGLWRKQV*QS 230 +RR L + +V + + A K RDA++AGT LVP Sbjct: 40 TRRPRLGTRLVVVSAQSNFSRVVQTAWKVGRDAVEAGTTLVP------------------ 81
Query: 229 LALWGPCICCIRCRNKAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAI 50 SVPRPVA+ GV + + +L+LL+S+ S A F+LA+ Sbjct: 82 -----------------------GSVPRPVARIGVTFVALSIALFLLKSVVSTAFFVLAM 118
Query: 49 GGV 41 G+ Sbjct: 119 MGL 121
>tr|A3CAK1|A3CAK1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032323 PE=4 SV=1 Length = 144
Score = 43.5 bits (101), Expect = 0.006 Identities = 22/48 (45%), Positives = 34/48 (70%) Frame = -1
Query: 184 KAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGV 41 +AGT + SVPRPVA+ GV + + +L+LL+S+ S A F+LA+ G+ Sbjct: 59 EAGTTLVPGSVPRPVARIGVTFVALSIALFLLKSVVSTAFFVLAMMGL 106
>tr|A9TW39|A9TW39_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_98062 PE=4 SV=1 Length = 283
Score = 42.0 bits (97), Expect = 0.018 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 6/135 (4%) Frame = -1
Query: 421 CKQVSRRTPLPS------LRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPCKCRSRCQ 260 C +R LPS L+IVA+K +A V+ + A DA T L+P Sbjct: 70 CVTEARGAALPSCAGRQELKIVAEKKSHAGEAAGFLVEAGKTAWDASTNLIP-------- 121
Query: 259 GLWRKQV*QSLALWGPCICCIRCRNKAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSL 80 ESVPR VA+ V ++G+ ++ L++ Sbjct: 122 ---------------------------------ESVPRGVARITVGVVGVSLIIHALRAF 148
Query: 79 FSIALFILAIGGVGH 35 FS ALFI+ I G + Sbjct: 149 FSTALFIMGIAGFSY 163
>tr|A7QKS3|A7QKS3_VITVI Chromosome undetermined scaffold_114, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001245001 PE=4 SV=1 Length = 160
Score = 41.6 bits (96), Expect = 0.024 Identities = 19/48 (39%), Positives = 33/48 (68%) Frame = -1
Query: 184 KAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGV 41 +AGT + ESVPRP+A+ V ++ + +L++ +S S A F+LA+ G+ Sbjct: 83 EAGTNLVPESVPRPIARISVTVVTLAVALFVFKSFLSTAFFVLAMMGL 130
>tr|A5C4R1|A5C4R1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008677 PE=4 SV=1 Length = 221
Score = 41.6 bits (96), Expect = 0.024 Identities = 19/48 (39%), Positives = 33/48 (68%) Frame = -1
Query: 184 KAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGV 41 +AGT + ESVPRP+A+ V ++ + +L++ +S S A F+LA+ G+ Sbjct: 83 EAGTNLVPESVPRPIARISVTVVTLAVALFVFKSFLSTAFFVLAMMGL 130
>tr|B6TR67|B6TR67_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 164
Score = 40.4 bits (93), Expect = 0.053 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 6/128 (4%) Frame = -1
Query: 406 RRTPLPS------LRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPCKCRSRCQGLWRK 245 RR P PS VA D +A A + DA++AG+ LVP Sbjct: 37 RRAPPPSPFPPKPRLFVASAQLDFSRAVQTAWRVGNDAVEAGSNLVP------------- 83
Query: 244 QV*QSLALWGPCICCIRCRNKAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIAL 65 SVPRP+A+ GVA + + +L++S+ S L Sbjct: 84 ----------------------------GSVPRPIARIGVAFAAVSVAFFLVKSIVSTTL 115
Query: 64 FILAIGGV 41 F+LA+ G+ Sbjct: 116 FVLAMMGL 123
>tr|Q9SVQ5|Q9SVQ5_ARATH Putative uncharacterized protein F17N18.110 OS=Arabidopsis thaliana GN=F17N18.110 PE=2 SV=1 Length = 180
Score = 39.3 bits (90), Expect = 0.12 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Frame = -1
Query: 184 KAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFIL--AIGGVGHGHHHLCSK 11 +AGT + SVPRPVA+ V I + SL++++S S A F+L +G +G + + Sbjct: 86 EAGTNLVPVSVPRPVARISVTIAALAVSLFVVKSFLSTAFFVLVCCVGTMGFAYFLFIAL 145
Query: 10 NR 5 N+ Sbjct: 146 NK 147
>tr|Q6NLB6|Q6NLB6_ARATH At4g13220 OS=Arabidopsis thaliana GN=At4g13220 PE=2 SV=1 Length = 176
Score = 38.9 bits (89), Expect = 0.15 Identities = 20/50 (40%), Positives = 30/50 (60%) Frame = -1
Query: 184 KAGTL*MQESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGVGH 35 +AGT + SVPRPVA+ V I + SL++++S S A F+L G + Sbjct: 86 EAGTNLVPVSVPRPVARISVTIAALAVSLFVVKSFLSTAFFVLGTMGFAY 135
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