BP918983 |
Clone id |
YMU001_000119_G06 |
Library |
YMU01 |
Length |
498 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000119_G06. |
Accession |
BP918983 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GACCGCATTGCCAACTTGCATGGTCTGTATCAACAGAAATCCAGGCAATACACAACTCTG TAAAAAATGCCTGAACTTGCTCGGGTATGTACAGAGTGGCCTCCCCCTTCTTCCAGTCAT GGAAAATAGCTTCGGGGAAGAGCATACTCTATATGAGGGTCATGATCCCAAGAATCCATA CCAAGCCCCGAAACTTAATTGGTAGAAGACTTGGGAGGTGTGAAGAGTTGCACAACAGTG CTAGAATTGGAATCCCGTCGGGAAAACTGTGCAGATCGAGGGGGATTGCTCTTGTGAGAT GACCCTTTGAGCTTCAAGATCCGTCGGATGGACCTAGGTAAAAGCAATCCAACTCTGTTG GAGTCCATAAGAAGAATAACTCCCAGGATGATCAGCAACCATCCGATCAACAGACAAAAT TGTCGAAAGGCCGATACAGGTAATGTCCCTCCAAGAACCAACATGCCTATAATCACTCCT GTGATGATCGATGCTACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8NGL7 |
Definition |
sp|Q8NGL7|OR4P4_HUMAN Olfactory receptor 4P4 OS=Homo sapiens |
Align length |
45 |
Score (bit) |
32.0 |
E-value |
1.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8RWH8 |
Definition |
tr|Q8RWH8|Q8RWH8_ARATH Putative uncharacterized protein At5g11960 OS=Arabidopsis thaliana |
Align length |
93 |
Score (bit) |
42.0 |
E-value |
0.016 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918983|Adiantum capillus-veneris mRNA, clone: YMU001_000119_G06. (498 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8RWH8|Q8RWH8_ARATH Putative uncharacterized protein At5g1196... 42 0.016 tr|Q0JJY9|Q0JJY9_ORYSJ Os01g0708300 protein (Fragment) OS=Oryza ... 37 0.40 tr|B8A8C5|B8A8C5_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.40 tr|A2ZX28|A2ZX28_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.40 tr|Q5KT57|Q5KT57_BOMMO Ras protein OS=Bombyx mori GN=ras3 PE=2 SV=1 35 1.5 tr|P90891|P90891_CAEEL Protein F55H12.3, partially confirmed by ... 35 2.0 tr|B4FVM9|B4FVM9_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.4 tr|Q68K07|Q68K07_9SAUR Olfactory receptor 2 (Fragment) OS=Chryse... 33 7.5 tr|A7P4K1|A7P4K1_VITVI Chromosome chr4 scaffold_6, whole genome ... 33 7.5 tr|Q8NH20|Q8NH20_HUMAN Seven transmembrane helix receptor (Fragm... 33 7.5 tr|Q8IXE7|Q8IXE7_HUMAN Seven transmembrane helix receptor OS=Hom... 33 7.5 tr|Q4PEE5|Q4PEE5_USTMA Putative uncharacterized protein OS=Ustil... 33 7.5 tr|A7ESQ4|A7ESQ4_SCLS1 Putative uncharacterized protein OS=Scler... 33 7.5 tr|B2EMX4|B2EMX4_9BACT Tetratricopeptide TPR_2 repeat protein OS... 33 9.8 tr|A5C3Z9|A5C3Z9_VITVI Putative uncharacterized protein OS=Vitis... 33 9.8 tr|B3M7P8|B3M7P8_DROAN GF10788 OS=Drosophila ananassae GN=GF1078... 33 9.8
>tr|Q8RWH8|Q8RWH8_ARATH Putative uncharacterized protein At5g11960 OS=Arabidopsis thaliana GN=At5g11960 PE=2 SV=1 Length = 344
Score = 42.0 bits (97), Expect = 0.016 Identities = 31/93 (33%), Positives = 43/93 (46%) Frame = -2
Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318 VASI+TGV+ GM LG LP S + L+ S+R+ LPRS RR Sbjct: 240 VASIVTGVVAGMFALGEKLPTSPSGRLLLLLGWLLIMLGVVLLVTSSRLIRHLPRSFRR- 298
Query: 317 LKLKGSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219 + N R+ + +D+N S V+Q T Sbjct: 299 SRQTSLERGFNIRRTTSHTPKDTNPSAVIQAAT 331
>tr|Q0JJY9|Q0JJY9_ORYSJ Os01g0708300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0708300 PE=4 SV=1 Length = 200
Score = 37.4 bits (85), Expect = 0.40 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = -2
Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318 VASI++GV+ GM+ L LP + +F L+ S R+ LPRS+++ Sbjct: 97 VASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIITGVILLVSSTRIIARLPRSMQKF 156
Query: 317 LKLK-GSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219 LK +H P SA+ +D ST + T Sbjct: 157 LKSNVERTHSIRRPSSAR--GKDPIPSTTIHAST 188
>tr|B8A8C5|B8A8C5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03456 PE=4 SV=1 Length = 352
Score = 37.4 bits (85), Expect = 0.40 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = -2
Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318 VASI++GV+ GM+ L LP + +F L+ S R+ LPRS+++ Sbjct: 249 VASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIITGVILLVSSTRIIARLPRSMQKF 308
Query: 317 LKLK-GSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219 LK +H P SA+ +D ST + T Sbjct: 309 LKSNVERTHSIRRPSSAR--GKDPIPSTAIHAST 340
>tr|A2ZX28|A2ZX28_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003100 PE=4 SV=1 Length = 355
Score = 37.4 bits (85), Expect = 0.40 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = -2
Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318 VASI++GV+ GM+ L LP + +F L+ S R+ LPRS+++ Sbjct: 252 VASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIITGVILLVSSTRIIARLPRSMQKF 311
Query: 317 LKLK-GSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219 LK +H P SA+ +D ST + T Sbjct: 312 LKSNVERTHSIRRPSSAR--GKDPIPSTTIHAST 343
>tr|Q5KT57|Q5KT57_BOMMO Ras protein OS=Bombyx mori GN=ras3 PE=2 SV=1 Length = 184
Score = 35.4 bits (80), Expect = 1.5 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -1
Query: 324 TDLEAQRVISQEQSPSICTVFPTGFQF*HCCATLHTSQVFYQL 196 TDLEA+RV+ +EQ ++ F F A +H + VFY L Sbjct: 118 TDLEAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDL 160
>tr|P90891|P90891_CAEEL Protein F55H12.3, partially confirmed by transcript evidence OS=Caenorhabditis elegans GN=F55H12.3 PE=4 SV=6 Length = 2957
Score = 35.0 bits (79), Expect = 2.0 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 2/115 (1%) Frame = -1
Query: 489 DHHRSDYRHVGSWRDITCIGLST--ILSVDRMVADHPGSYSSYGLQQSWIAFT*VHPTDL 316 D++ + Y + ++++T G + +R D Y++ GL + I + P Sbjct: 688 DNNHTSYGTMRKYQNLTNFGFGAFCVCGDERSQPDEWICYNTEGLMTNPINNACMLP--- 744
Query: 315 EAQRVISQEQSPSICTVFPTGFQF*HCCATLHTSQVFYQLSFGAWYGFLGS*PSY 151 EAQ + +Q P+ VFPTG+ C + +Y FG W GS Y Sbjct: 745 EAQDALFVKQDPTDGYVFPTGYMIQMTCMICPSLIKYYTCEFGLWKTSDGSIQPY 799
>tr|B4FVM9|B4FVM9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 192
Score = 33.9 bits (76), Expect = 4.4 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -2
Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318 VASI++GV+ GM+ L LP + +F L+ S R+ LPR +++ Sbjct: 89 VASIVSGVVAGMIALDEHLPKAPTARFFLLLGWFFIITGVILLVSSTRLIARLPRPVQKF 148
Query: 317 LKLK-GSSHKSNPPRSAQ 267 LK +H P SA+ Sbjct: 149 LKSNIERTHSIRRPGSAR 166
>tr|Q68K07|Q68K07_9SAUR Olfactory receptor 2 (Fragment) OS=Chrysemys picta PE=4 SV=1 Length = 186
Score = 33.1 bits (74), Expect = 7.5 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -3
Query: 271 HSFPDGIPILALLCNSSHLPSLLPIKFRGLVWILGIMTLI*SMLF 137 H F D P+L L C+ +H+ +L + F G++ + ++ +I S L+ Sbjct: 121 HYFCDTYPLLKLACSDNHISEILLVVFSGVIAMSTLLIVIISYLY 165
>tr|A7P4K1|A7P4K1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032183001 PE=4 SV=1 Length = 294
Score = 33.1 bits (74), Expect = 7.5 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 3/96 (3%) Frame = -2
Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318 VASI+TGV+ GML LG LP + + L+ S + LPR +R Sbjct: 187 VASILTGVLAGMLALGEQLPSAPDARLSLLFGWLLIIIGVILLVSSTWLVRHLPRPLRHY 246
Query: 317 LKLKGSSHKSNPPRSAQFSR---RDSNSSTVVQLFT 219 ++ G +S S RDS+ S V+Q T Sbjct: 247 VQ-SGVERNFGVKQSGSRSGTRVRDSSPSAVIQAST 281
>tr|Q8NH20|Q8NH20_HUMAN Seven transmembrane helix receptor (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 312
Score = 33.1 bits (74), Expect = 7.5 Identities = 14/44 (31%), Positives = 26/44 (59%) Frame = -3
Query: 271 HSFPDGIPILALLCNSSHLPSLLPIKFRGLVWILGIMTLI*SML 140 H F D P+L L C+ +H+ +LP+ F GL+ + + ++ S + Sbjct: 176 HYFCDVPPLLRLSCSDAHINEMLPLVFSGLIAMFTFIVIMVSYI 219
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