BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918973|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_F07.
         (466 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8A8L8|SUCC_IGNH4 Succinyl-CoA ligase [ADP-forming] subunit b...    32   1.8  

>sp|A8A8L8|SUCC_IGNH4 Succinyl-CoA ligase [ADP-forming] subunit beta
           OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 /
           JCM 14125) GN=sucC PE=3 SV=1
          Length = 376

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = +1

Query: 310 SFTI--AQ*QIPIINGFEGRME-ESLLKEKDDSLIRLAVKPEVSV 435
           SFTI     ++ ++   EG ME E L KEK D++++L ++PEV +
Sbjct: 103 SFTIDRTNRKVVMLASAEGGMEIEELAKEKPDAIVKLPIEPEVGL 147

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918973|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_F07.
         (466 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1DHD8|B1DHD8_9BACL Binding-protein-dependent transport syste...    34   3.1  
tr|B6M816|B6M816_BRAFL Putative uncharacterized protein (Fragmen...    34   4.1  
tr|Q21WK8|Q21WK8_RHOFD Acetylornithine aminotransferase OS=Rhodo...    33   7.2  
tr|Q400H8|Q400H8_ELAGV AP1-like MADS box transcription factor (F...    33   7.2  
tr|B1Y1Z8|B1Y1Z8_LEPCP Acetylornithine and succinylornithine ami...    33   9.4  
tr|B8G3C6|B8G3C6_9CHLR Inner-membrane translocator OS=Chloroflex...    33   9.4  
tr|B8BQF2|B8BQF2_THAPS Transporter (Fragment) OS=Thalassiosira p...    33   9.4  

>tr|B1DHD8|B1DHD8_9BACL Binding-protein-dependent transport systems
           inner membrane component OS=Paenibacillus sp. JDR-2
           GN=Pjdr2DRAFT_4539 PE=3 SV=1
          Length = 300

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = -3

Query: 386 SFKRLSSILPSKPLIIGICYWAIVKEWMYHYGPYGEGISSA---YMDPEKC-LSLPTTYF 219
           SFK+LS  L   P  I    W  V  ++Y++  Y  GI +    YMD +   +   T+Y+
Sbjct: 101 SFKKLSQTLMFLPYFIS---WVTVSAFVYNFLNYEYGIVNKLLHYMDVQALDIYSNTSYW 157

Query: 218 FFLMPF 201
           +FL+PF
Sbjct: 158 YFLLPF 163


>tr|B6M816|B6M816_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_220336 PE=4 SV=1
          Length = 232

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 308 WMYHYGPYGEGISSAYMDPEKCLSLPTTYFF 216
           W+YH   +G+G    YMD  KC    T+ F+
Sbjct: 181 WVYHQASFGQGTGPIYMDNVKCTGNETSLFY 211


>tr|Q21WK8|Q21WK8_RHOFD Acetylornithine aminotransferase
           OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
           BAA-621 / T118) GN=Rfer_2121 PE=3 SV=1
          Length = 404

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -1

Query: 193 DLLQAANQLCNRVVNIFMVNEFVCSI*RKCKW--QQWLKIVP 74
           D L+A  QLC+    + M++E  C + R  KW   QW  IVP
Sbjct: 204 DYLKAVRQLCDERDWLLMIDEVQCGMGRTGKWFAHQWAGIVP 245


>tr|Q400H8|Q400H8_ELAGV AP1-like MADS box transcription factor
           (Fragment) OS=Elaeis guineensis var. tenera GN=mads2
           PE=2 SV=1
          Length = 201

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
 Frame = +2

Query: 83  FKPLLPLTFSLDRTYKFIHHKD---VYNSITQLVRCLQQIPTEKALGRRN-----RLLED 238
           FK L  L   LD   + I  +    +++SI +L R       EKAL  +N     RL+E 
Sbjct: 79  FKELQQLELHLDGALRHIRSRRNQLLFDSIAELQR------KEKALHEQNSILERRLMES 132

Query: 239 *GISLDPYMPRIYPLHMVHNDTSIPLQLPSNRSL 340
            G       PR  P       +S P  LPSNRSL
Sbjct: 133 NGAMALTEHPRWEPQGQPQTSSSSPGTLPSNRSL 166


>tr|B1Y1Z8|B1Y1Z8_LEPCP Acetylornithine and succinylornithine
           aminotransferase OS=Leptothrix cholodnii (strain ATCC
           51168 / LMG 8142 / SP-6) GN=Lcho_0906 PE=4 SV=1
          Length = 402

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 193 DLLQAANQLCNRVVNIFMVNEFVCSI*RKCKW--QQWLKIVP 74
           D LQ+  +LC++   + M++E  C I R  KW   QW  IVP
Sbjct: 203 DYLQSLRRLCDQQDWLLMLDEVQCGIGRTGKWFAHQWAGIVP 244


>tr|B8G3C6|B8G3C6_9CHLR Inner-membrane translocator OS=Chloroflexus
           aggregans DSM 9485 GN=Cagg_2426 PE=4 SV=1
          Length = 352

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 333 LLLGNCKGMDVSLWTIWRGYILGIYGSREMP*SSNNLFLLP 211
           L +      ++ +W +  G +LGI  S  +P +SNNLF LP
Sbjct: 127 LAIATLASQEIIIWLLTHGKLLGIGESLTLPRASNNLFGLP 167


>tr|B8BQF2|B8BQF2_THAPS Transporter (Fragment) OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_31226 PE=4 SV=1
          Length = 426

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
 Frame = -2

Query: 372 LLHSTLKTID-------YRDLLLGNCKGMDVSLWTIWRGYILGIYGS 253
           L HS++K  D       + DLL    + +++ LW  W GY +G YG+
Sbjct: 212 LFHSSVKLKDEHVESSRFSDLLSKKWRKINILLWFTWIGYAMGYYGT 258