BP918938
Clone id YMU001_000119_C06
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AACTGGAAGAATTCGCGGCCGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGG
GATTTAGATTGTACTCATTCCAATTACCAGACTTGAAAAAGCCCAGTATTGTTATTTATT
GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT
GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCCAATTCTCCGTCACCCGTCAC
CACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAAGC
ATCGCCGGCGCCAAGGCCGTGCGATTCGTTGAGTTATCATGATTCACCGCATTACCGGGC
AAGCCCGCATCGGCCTTTTATCTAATAAATGCGTCCCTTCCAGAAGTCGGGATTTGGTGC
ACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAGGTACCATCAAAGAAACTA
TAACTGATTTAATGAGCCATTCGCAGTTTCAC
■■Homology search results ■■ -
sp_hit_id Q06J40
Definition sp|Q06J40|PSAB_BIGNA Photosystem I P700 chlorophyll a apoprotein A2 OS=Bigelowiella natans
Align length 48
Score (bit) 30.8
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918938|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C06.
(488 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q06J40|PSAB_BIGNA Photosystem I P700 chlorophyll a apoprotein... 31 3.4
sp|Q5XHY8|CF146_RAT Uncharacterized protein C6orf146 homolog OS=... 30 4.5
sp|O93988|ACL1_SORMA ATP-citrate synthase subunit 1 OS=Sordaria ... 29 9.9
sp|Q9P7W3|ACL1_SCHPO Probable ATP-citrate synthase subunit 1 OS=... 29 9.9
sp|Q8X097|ACL1_NEUCR Probable ATP-citrate synthase subunit 1 OS=... 29 9.9

>sp|Q06J40|PSAB_BIGNA Photosystem I P700 chlorophyll a apoprotein A2
OS=Bigelowiella natans GN=psaB PE=3 SV=1
Length = 735

Score = 30.8 bits (68), Expect = 3.4
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -2

Query: 163 GYHIQGRQQARKLPNPDTGR**Q*ITILGFFKSGNWNEYNLNPLTRIH 20
G HI+ LP+PD L F SGNW+ Y+ NP T H
Sbjct: 205 GQHIRWNNYLSTLPHPDG---------LAPFFSGNWSAYSTNPDTFNH 243


>sp|Q5XHY8|CF146_RAT Uncharacterized protein C6orf146 homolog
OS=Rattus norvegicus PE=2 SV=2
Length = 419

Score = 30.4 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1

Query: 209 VTENWGSIPEREPEKRLPHPRKAAGAQITQSRHGEVVTINNNTGLFQVW 63
++E G + + L P + Q+T S H + NNN G+FQ+W
Sbjct: 41 LSEKDGVAGGKTNKNHLESPAEQLVLQLTVSEHAHSRSQNNNQGVFQLW 89


>sp|O93988|ACL1_SORMA ATP-citrate synthase subunit 1 OS=Sordaria
macrospora GN=ACL1 PE=3 SV=1
Length = 674

Score = 29.3 bits (64), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1

Query: 94 IVTTSPCRDWVICAPAAFLGCGSRFSGSLSGIEPQFS 204
I+TT +D + A L GSRF G+L G +F+
Sbjct: 471 IITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFT 507


>sp|Q9P7W3|ACL1_SCHPO Probable ATP-citrate synthase subunit 1
OS=Schizosaccharomyces pombe GN=SPBC1703.07 PE=1 SV=1
Length = 615

Score = 29.3 bits (64), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1

Query: 94 IVTTSPCRDWVICAPAAFLGCGSRFSGSLSGIEPQFS 204
I+TT +D + A L G+RF G+L G +FS
Sbjct: 431 IITTRAGKDLISSLVAGLLTIGTRFGGALDGAAQEFS 467


>sp|Q8X097|ACL1_NEUCR Probable ATP-citrate synthase subunit 1
OS=Neurospora crassa GN=B14D6.310 PE=3 SV=1
Length = 670

Score = 29.3 bits (64), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1

Query: 94 IVTTSPCRDWVICAPAAFLGCGSRFSGSLSGIEPQFS 204
I+TT +D + A L GSRF G+L G +F+
Sbjct: 467 IITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFT 503


tr_hit_id A8P6U5
Definition tr|A8P6U5|A8P6U5_BRUMA Putative uncharacterized protein (Fragment) OS=Brugia malayi
Align length 57
Score (bit) 92.0
E-value 1.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918938|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C06.
(488 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8P6U5|A8P6U5_BRUMA Putative uncharacterized protein (Fragmen... 92 1e-17
tr|A8NHW8|A8NHW8_BRUMA Putative uncharacterized protein (Fragmen... 59 8e-17
tr|B6A8G9|B6A8G9_HELAM CHK1 checkpoint-like protein (Fragment) O... 81 2e-14
tr|A8NMG1|A8NMG1_BRUMA Putative uncharacterized protein OS=Brugi... 69 5e-14
tr|Q28EK6|Q28EK6_XENTR CHK1 checkpoint homolog (S. pombe) OS=Xen... 68 2e-10
tr|B5M6G9|B5M6G9_ORNHU Tumor differentially expressed protein OS... 66 1e-09
tr|A8NQF6|A8NQF6_BRUMA Putative uncharacterized protein OS=Brugi... 59 2e-07
tr|B8A8W0|B8A8W0_ORYSI Putative uncharacterized protein OS=Oryza... 54 5e-06
tr|Q3LVI1|Q3LVI1_TAROF TO71-3 (Fragment) OS=Taraxacum officinale... 53 7e-06
tr|B3SDC0|B3SDC0_TRIAD Predicted protein OS=Trichoplax adhaerens... 42 7e-06
tr|B3SDD1|B3SDD1_TRIAD Predicted protein OS=Trichoplax adhaerens... 33 3e-05
tr|A8NVW9|A8NVW9_BRUMA Putative uncharacterized protein OS=Brugi... 44 0.003
tr|Q4PMZ6|Q4PMZ6_IXOSC Secreted protein OS=Ixodes scapularis GN=... 43 0.007
tr|Q00Y69|Q00Y69_OSTTA Chromosome 12 contig 1, DNA sequence. (Fr... 33 0.027
tr|A8P366|A8P366_BRUMA Putative uncharacterized protein OS=Brugi... 40 0.076
tr|A9ZLE7|A9ZLE7_COXBU Putative uncharacterized protein OS=Coxie... 39 0.100
tr|Q7M4B1|Q7M4B1_TRYCR Probable flagellar protein (Clone FCH-F8-... 37 0.65
tr|Q7RN92|Q7RN92_PLAYO Putative uncharacterized protein PY01929 ... 28 1.1
tr|B8RJH2|B8RJH2_CULTA Putative uncharacterized protein OS=Culex... 35 1.9
tr|B0WM70|B0WM70_CULQU Putative uncharacterized protein OS=Culex... 35 1.9
tr|A6RFK5|A6RFK5_AJECN Predicted protein OS=Ajellomyces capsulat... 33 9.3

>tr|A8P6U5|A8P6U5_BRUMA Putative uncharacterized protein (Fragment)
OS=Brugia malayi GN=Bm1_17870 PE=4 SV=1
Length = 62

Score = 92.0 bits (227), Expect = 1e-17
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +1

Query: 121 WVICAPAAFLGCGSRFSGSLSGIEPQFSVTRHHHGRPLSYHRKLIGQKFE*SIAGAK 291
WVICAPAAFLGCGSRFSGSLSG+EP FSVTR++HGR ++YHRKLI Q + +AG +
Sbjct: 1 WVICAPAAFLGCGSRFSGSLSGVEPLFSVTRYNHGRHINYHRKLIRQTLDRYVAGTR 57


>tr|A8NHW8|A8NHW8_BRUMA Putative uncharacterized protein (Fragment)
OS=Brugia malayi GN=Bm1_02890 PE=4 SV=1
Length = 128

Score = 58.5 bits (140), Expect(3) = 8e-17
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -1

Query: 176 EPEKRLPHPRKAAGAQITQSRHGEVVTINNNTGLFQ 69
EPEKRLPHPRKAAGAQIT S++ EVVT NN T LF+
Sbjct: 34 EPEKRLPHPRKAAGAQITHSQNEEVVTKNNETVLFE 69



Score = 39.3 bits (90), Expect(3) = 8e-17
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -3

Query: 282 GDASFKFLPYQLSMVG*RPTMVVTGDGE 199
GD S K LPYQLSMV PTMVVTG+ E
Sbjct: 9 GDVSIKCLPYQLSMVVYVPTMVVTGEPE 36



Score = 32.0 bits (71), Expect(3) = 8e-17
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2

Query: 73 FKSGNWNEYNLNPLTRIHWRASLV 2
F++G N YNLN LTRI+ RASLV
Sbjct: 68 FEAGYRNGYNLNLLTRIYERASLV 91


>tr|B6A8G9|B6A8G9_HELAM CHK1 checkpoint-like protein (Fragment)
OS=Helicoverpa armigera PE=2 SV=1
Length = 47

Score = 81.3 bits (199), Expect = 2e-14
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = -1

Query: 227 LPWW*RVTENWGSIPEREPEKRLPHPRKAAGAQITQSRHGEVVT 96
LPW RVT N GSIPEREPEKRLPHPRKAAGAQIT SRHGEVVT
Sbjct: 4 LPWLSRVTGNQGSIPEREPEKRLPHPRKAAGAQITHSRHGEVVT 47


>tr|A8NMG1|A8NMG1_BRUMA Putative uncharacterized protein OS=Brugia
malayi GN=Bm1_05555 PE=4 SV=1
Length = 115

Score = 68.6 bits (166), Expect(2) = 5e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1

Query: 194 GSIPEREPEKRLPHPRKAAGAQITQSRHGEVVTINNNTGLFQ 69
GS PEREPEKRLPHPRKAAGAQIT S++ EVVT NN T LF+
Sbjct: 15 GSTPEREPEKRLPHPRKAAGAQITHSQNEEVVTKNNETVLFE 56



Score = 32.0 bits (71), Expect(2) = 5e-14
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2

Query: 73 FKSGNWNEYNLNPLTRIHWRASLV 2
F++G N YNLN LTRI+ RASLV
Sbjct: 55 FEAGYRNGYNLNLLTRIYERASLV 78


>tr|Q28EK6|Q28EK6_XENTR CHK1 checkpoint homolog (S. pombe)
OS=Xenopus tropicalis GN=chek1 PE=2 SV=1
Length = 231

Score = 68.2 bits (165), Expect = 2e-10
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -1

Query: 176 EPEKRLPHPRKAAGAQITQSRHGEVVTINNNTGLFQ 69
EPEKRLPHPRKAAGAQIT SR GEVVT NNNTGLF+
Sbjct: 187 EPEKRLPHPRKAAGAQITHSRRGEVVTKNNNTGLFR 222


>tr|B5M6G9|B5M6G9_ORNHU Tumor differentially expressed protein
OS=Ornithoctonus huwena PE=4 SV=1
Length = 77

Score = 65.9 bits (159), Expect = 1e-09
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = -3

Query: 282 GDASFKFLPYQLSMVG*RPTMVVTGDGELGFDSGEGA 172
GDASFK LPYQLSMVG PTMVVTG+GE GFDSGEGA
Sbjct: 41 GDASFKCLPYQLSMVGYAPTMVVTGNGESGFDSGEGA 77


>tr|A8NQF6|A8NQF6_BRUMA Putative uncharacterized protein OS=Brugia
malayi GN=Bm1_07595 PE=4 SV=1
Length = 128

Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -1

Query: 176 EPEKRLPHPRKAAGAQITQSRHGEVVTINNNTGLFQ 69
EPEKRLPHPRKAAGAQIT S++ EVVT NN T LF+
Sbjct: 34 EPEKRLPHPRKAAGAQITHSQNEEVVTKNNETVLFE 69



Score = 42.4 bits (98), Expect = 0.012
Identities = 36/96 (37%), Positives = 47/96 (48%)
Frame = -2

Query: 289 WRRRCFIQISALSTFDGRIEAYHXXXXXXXXXXXXXXGSLRNGYHIQGRQQARKLPNPDT 110
+RRR + Q+SALSTFDG + AYH + G I Q + +
Sbjct: 8 YRRRIY-QVSALSTFDGSLCAYHGCNGEPEKRLPHPRKAA--GAQITHSQNEEVVTKNNE 64

Query: 109 GR**Q*ITILGFFKSGNWNEYNLNPLTRIHWRASLV 2
T+L F++G N YNLN LTRI+ RASLV
Sbjct: 65 -------TVL--FEAGYRNGYNLNLLTRIYERASLV 91


>tr|B8A8W0|B8A8W0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02128 PE=4 SV=1
Length = 67

Score = 53.5 bits (127), Expect = 5e-06
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -1

Query: 317 HDNSTNRTALAPAMLHSNFCPINFRW 240
HDNST+RTAL PA HSNFCPINFRW
Sbjct: 3 HDNSTDRTALVPATHHSNFCPINFRW 28


>tr|Q3LVI1|Q3LVI1_TAROF TO71-3 (Fragment) OS=Taraxacum officinale
GN=To71-3 PE=2 SV=1
Length = 67

Score = 53.1 bits (126), Expect = 7e-06
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -3

Query: 168 ETATTSKEGSRRANYPIPTRGGSDNK 91
ETATTSKEGSRRANYPI TRGGSDNK
Sbjct: 42 ETATTSKEGSRRANYPILTRGGSDNK 67


>tr|B3SDC0|B3SDC0_TRIAD Predicted protein OS=Trichoplax adhaerens
GN=TRIADDRAFT_62277 PE=4 SV=1
Length = 206

Score = 41.6 bits (96), Expect(2) = 7e-06
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +3

Query: 3 TRLALQWILVKGFRLYSFQLPDLKKP 80
TRLALQWILVKGF+LYSF+L P
Sbjct: 167 TRLALQWILVKGFKLYSFRLRSQMAP 192



Score = 31.2 bits (69), Expect(2) = 7e-06
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2

Query: 65 RLEKAQYCYLLSLPPRVGIG 124
R + A Y Y LSLPPRVGIG
Sbjct: 187 RSQMAPYRYFLSLPPRVGIG 206