BP918937 |
Clone id |
YMU001_000119_C05 |
Library |
YMU01 |
Length |
495 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000119_C05. |
Accession |
BP918937 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL414Contig1 |
Sequence |
AGATGGATGATGAGCTTCAGGCATGGTGGACGGAAGTGCGGGAAGTTGGACATGGAGACC ACAAGGGCGCACAGTGGTGGGAAAAAATGGTTTCAAAAACTGCTCTAGTAGAGGCAATTT CTACACTCCTATGGATGGCCACTGGCCTACACGCAGTGGCGGGGTTTGGGCAATACCCAT TTGCAGGATTTATGCCCAACAGTCCAACAATGGGGAGGAGACTAATACCGGAGGAGGGCT CCAAGGAGCACAAGGAGCTGTTGGGCGATCCGAGAGCCTTCTTTCTTGCCTCATTTTCAT CTCAAAGAGAGGCAACAACAGCTATGGGGACCTTTGAAATAACTTCTCAGCATATGAGTG AGGAGGTGTACCTGGGGGGTGAGGGCGGATGTGCCTCCCTCGCACGATCCCCGAGTCGTA GCTGCCCATGAGCGTTTCCGAGCTTCTATAGCTGCGCTACATGATGTTATACATGAGCGT ACCGGCCACCCGACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q76I22 |
Definition |
sp|Q76I22|LOX1_ORYSJ Lipoxygenase 1 OS=Oryza sativa subsp. japonica |
Align length |
124 |
Score (bit) |
146.0 |
E-value |
4.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918937|Adiantum capillus-veneris mRNA, clone: YMU001_000119_C05. (495 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q76I22|LOX1_ORYSJ Lipoxygenase 1 OS=Oryza sativa subsp. japon... 146 4e-35 sp|P29250|LOX2_ORYSJ Lipoxygenase 2 OS=Oryza sativa subsp. japon... 144 2e-34 sp|Q7G794|LOX3_ORYSJ Putative lipoxygenase 3 OS=Oryza sativa sub... 142 8e-34 sp|P29114|LOX1_HORVU Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1... 140 3e-33 sp|P38415|LOXA_SOLLC Lipoxygenase A OS=Solanum lycopersicum GN=L... 139 7e-33 sp|P37831|LOX1_SOLTU Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1... 139 9e-33 sp|Q06327|LOX1_ARATH Lipoxygenase 1 OS=Arabidopsis thaliana GN=L... 134 3e-31 sp|P27481|LOXB_PHAVU Lipoxygenase (Fragment) OS=Phaseolus vulgar... 133 4e-31 sp|P38417|LOX4_SOYBN Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=... 132 9e-31 sp|Q53RB0|LOX4_ORYSJ Probable lipoxygenase 4 OS=Oryza sativa sub... 130 4e-30 sp|P38416|LOXB_SOLLC Lipoxygenase B OS=Solanum lycopersicum GN=L... 128 2e-29 sp|P09186|LOX3_SOYBN Seed lipoxygenase-3 OS=Glycine max GN=LOX1.... 127 4e-29 sp|P27480|LOXA_PHAVU Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOX... 126 6e-29 sp|P09918|LOX3_PEA Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.... 126 6e-29 sp|P24095|LOXX_SOYBN Seed lipoxygenase OS=Glycine max GN=LOX1.4 ... 124 3e-28 sp|P09439|LOX2_SOYBN Seed lipoxygenase-2 OS=Glycine max GN=LOX1.... 122 9e-28 sp|P38414|LOX1_LENCU Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE... 122 1e-27 sp|P14856|LOX2_PEA Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.... 121 2e-27 sp|P08170|LOX1_SOYBN Seed lipoxygenase-1 OS=Glycine max GN=LOX1.... 120 3e-27 sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa sub... 119 6e-27 sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum... 118 2e-26 sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sat... 115 8e-26 sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=... 115 1e-25 sp|P38418|LOXC_ARATH Lipoxygenase, chloroplastic OS=Arabidopsis ... 113 4e-25 sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum... 113 5e-25 sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum... 110 5e-24 sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa sub... 107 2e-23 sp|O16025|AOSL_PLEHO Allene oxide synthase-lipoxygenase protein ... 49 2e-05 sp|P12527|LOX5_RAT Arachidonate 5-lipoxygenase OS=Rattus norvegi... 42 0.002 sp|P51399|LOX5_MESAU Arachidonate 5-lipoxygenase OS=Mesocricetus... 42 0.002
>sp|Q76I22|LOX1_ORYSJ Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2 Length = 863
Score = 146 bits (369), Expect = 4e-35 Identities = 65/124 (52%), Positives = 87/124 (70%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D ELQAWW EVREVGHGD K A WW KM S L +A +T++W+A+ LHA FGQYP+A Sbjct: 661 DVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIASALHAAVNFGQYPYA 720
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G++PN PT+ RR +PE GSKE+ EL +P FF+ + +SQ + + EI S+H ++E Sbjct: 721 GYLPNRPTISRRPMPEPGSKEYTELDENPEKFFIRTITSQFQTILGVSLIEILSKHSADE 780
Query: 366 VYLG 377 +YLG Sbjct: 781 IYLG 784
>sp|P29250|LOX2_ORYSJ Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2 Length = 870
Score = 144 bits (363), Expect = 2e-34 Identities = 63/124 (50%), Positives = 86/124 (69%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D ELQAWW EVREVGHGD K A WW +M + LV+A +T++W+ + LHA FGQYP+A Sbjct: 668 DAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACATIIWIGSALHAAVNFGQYPYA 727
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G++PN P++ RR +PE G+KE+ EL DP F+ + + Q +A + EI S+H S+E Sbjct: 728 GYLPNRPSVSRRPMPEPGTKEYDELARDPEKVFVRTITKQMQAIVGISLLEILSKHSSDE 787
Query: 366 VYLG 377 VYLG Sbjct: 788 VYLG 791
>sp|Q7G794|LOX3_ORYSJ Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1 Length = 866
Score = 142 bits (358), Expect = 8e-34 Identities = 62/124 (50%), Positives = 87/124 (70%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D ELQAWW EVREVGHGD KGA WW +M + + L +A +T++W+A+ LHA FGQYP+A Sbjct: 664 DAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYA 723
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G++PN PT+ RR +PE G++ + EL DP F+ + +SQ + + E+ S+H S+E Sbjct: 724 GYLPNRPTVSRRRMPEPGTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKHSSDE 783
Query: 366 VYLG 377 VYLG Sbjct: 784 VYLG 787
>sp|P29114|LOX1_HORVU Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2 Length = 862
Score = 140 bits (353), Expect = 3e-33 Identities = 61/124 (49%), Positives = 84/124 (67%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D E+QAWW E REVGHGD K A WW KM S L +A +T++W+ + LHA FGQYP+A Sbjct: 660 DTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQYPYA 719
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 GF+PN PT+ RR +PE G++E+ EL DP F+ + +SQ + + E+ S+H S+E Sbjct: 720 GFLPNRPTVSRRRMPEPGTEEYAELERDPERAFIHTITSQIQTIIGVSLLEVLSKHSSDE 779
Query: 366 VYLG 377 +YLG Sbjct: 780 LYLG 783
>sp|P38415|LOXA_SOLLC Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1 Length = 860
Score = 139 bits (350), Expect = 7e-33 Identities = 57/124 (45%), Positives = 87/124 (70%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D+ELQAWW EVREVGHGD K WW +M + L+++ +T++W+A+ LHA FGQYP+A Sbjct: 664 DNELQAWWKEVREVGHGDKKNEPWWAEMETPQELIDSCTTIIWIASALHAAVNFGQYPYA 723
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G++PN PT+ R+ +PE G+ E++EL +P FL + ++Q + + EI S+H ++E Sbjct: 724 GYLPNRPTVSRKFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDE 783
Query: 366 VYLG 377 +YLG Sbjct: 784 IYLG 787
>sp|P37831|LOX1_SOLTU Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1 Length = 861
Score = 139 bits (349), Expect = 9e-33 Identities = 57/124 (45%), Positives = 87/124 (70%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D+ELQAWW E+REVGHGD K WW +M + L+++ +T++W+A+ LHA FGQYP+A Sbjct: 665 DNELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYA 724
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G++PN PT+ RR +PE G+ E++EL +P FL + ++Q + + EI S+H ++E Sbjct: 725 GYLPNRPTVSRRFMPEPGTPEYEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDE 784
Query: 366 VYLG 377 +YLG Sbjct: 785 IYLG 788
>sp|Q06327|LOX1_ARATH Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=2 SV=1 Length = 859
Score = 134 bits (336), Expect = 3e-31 Identities = 59/124 (47%), Positives = 82/124 (66%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D ELQAWW EVRE GHGD K WW KM ++ LVE+ + ++W+A+ LHA FGQYP A Sbjct: 663 DTELQAWWKEVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVA 722
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G++PN PT+ R+ +P+E + E +EL +P FL + ++Q + + EI S H S+E Sbjct: 723 GYLPNRPTISRQYMPKENTPEFEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDE 782
Query: 366 VYLG 377 VYLG Sbjct: 783 VYLG 786
>sp|P27481|LOXB_PHAVU Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1 Length = 741
Score = 133 bits (335), Expect = 4e-31 Identities = 60/128 (46%), Positives = 82/128 (64%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D ELQAWW E+ +VGHGD K WW KM S+ LVE +TL+W+A+ LHA FGQYP+ Sbjct: 550 DSELQAWWKELVQVGHGDLKDKPWWPKMQSRENLVEVSTTLIWIASALHAAVNFGQYPYG 609
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G + N PT+ RR +PE+GS E+ L +P FL + + ++E + EI S+H S+E Sbjct: 610 GLILNRPTISRRFMPEKGSAEYAALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDE 669
Query: 366 VYLGGEGG 389 +YLG G Sbjct: 670 IYLGERDG 677
>sp|P38417|LOX4_SOYBN Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1 Length = 853
Score = 132 bits (332), Expect = 9e-31 Identities = 60/128 (46%), Positives = 82/128 (64%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D ELQAWW E+ EVGHGD K WW+KM ++ LVEA + L+W+A+ LHA FGQYP+ Sbjct: 656 DPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASAILIWIASALHAAVNFGQYPYG 715
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEITSQHMSEE 365 G + N PT+ RR +PE+GS E+ L +P FL + + ++E + EI S+H S+E Sbjct: 716 GLILNRPTISRRFMPEKGSPEYDALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDE 775
Query: 366 VYLGGEGG 389 YLG G Sbjct: 776 FYLGQRDG 783
>sp|Q53RB0|LOX4_ORYSJ Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1 Length = 877
Score = 130 bits (326), Expect = 4e-30 Identities = 62/127 (48%), Positives = 84/127 (66%), Gaps = 3/127 (2%) Frame = +3
Query: 6 DDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVAGFGQYPFA 185 D+ELQAWW EVREVGHGD K WW KM + L A + ++W+A+ LHA FGQYP+A Sbjct: 671 DEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYA 730
Query: 186 GFMPNSPTMGRRLIPEEGSKEHKELL--GDPR-AFFLASFSSQREATTAMGTFEITSQHM 356 GF+PN PT+ RR +PE G++E+ +L GD F+ + +SQ + + EI S+H Sbjct: 731 GFLPNRPTVSRRPMPEPGTEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHS 790
Query: 357 SEEVYLG 377 S+EVYLG Sbjct: 791 SDEVYLG 797
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9XFL9 |
Definition |
tr|Q9XFL9|Q9XFL9_MAIZE Lipoxygenase (Fragment) OS=Zea mays |
Align length |
124 |
Score (bit) |
153.0 |
E-value |
5.0e-36 |
Report |
|