BP918901 |
Clone id |
YMU001_000118_G10 |
Library |
YMU01 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000118_G10. |
Accession |
BP918901 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAACCTCTTGTCCTCCAAACTTTCATCACTATTTATATTGCTTTTAACTAAGTCTAATTG ATCATTATCCACCACTATTTTAACAGGCTCATCTGCACCTTTCCCTGTCTCTAAATGTTC ACCAGGTGTTTTTTCTGACTGCTCTATCTTTTCAAAGTCAGAGCCATGCGATAAGGCTTG AGAATCCTTCACAAGTGCAGGCTGTTCAGCCTGTAATTTCCCCTCTTTGCTCGCAGTCGA ATTTACTGCTTGAGAATCATCAGTCCTATCCCTGGTCGATACTGTGCTCTTGCCCACATG TTCAACCTTGCCCTCGTTCACTACATGCAAAACAGGATCTGCACCAATCAATGGTCTGTT TGTTGTAGGATCCACATTTTTAGAGCCAGCAACCGGACCATCTGCCAACTGCACACCCCT TTCTTGGCCTGTTTCCCTTTCTGGATGCAAGAACTTGCATGCACTGCCCCGAAAACACCT GCCCCTTGCATAGTGAAAGCAGACTGCAGGTCCACTTGATCTCCCTCCTCTTCTGCCCCT CCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0J952 |
Definition |
sp|Q0J952|C3H32_ORYSJ Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica |
Align length |
138 |
Score (bit) |
42.4 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q258Y6 |
Definition |
tr|Q258Y6|Q258Y6_ORYSA H0624F09.12 protein OS=Oryza sativa |
Align length |
138 |
Score (bit) |
42.4 |
E-value |
0.016 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918901|Adiantum capillus-veneris mRNA, clone: YMU001_000118_G10. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q258Y6|Q258Y6_ORYSA H0624F09.12 protein OS=Oryza sativa GN=H0... 42 0.016 tr|A2XYU2|A2XYU2_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.016 tr|A7P6E8|A7P6E8_VITVI Chromosome chr9 scaffold_7, whole genome ... 39 0.18 tr|A7SEJ9|A7SEJ9_NEMVE Predicted protein OS=Nematostella vectens... 39 0.23 tr|A2E032|A2E032_TRIVA Putative uncharacterized protein OS=Trich... 39 0.23 tr|A9RJZ2|A9RJZ2_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.31 tr|Q384H2|Q384H2_9TRYP Putative uncharacterized protein OS=Trypa... 38 0.40 tr|Q22CU0|Q22CU0_TETTH Zinc finger, C2H2 type family protein OS=... 38 0.40 tr|B0WYI4|B0WYI4_CULQU Putative uncharacterized protein OS=Culex... 37 0.52 tr|Q7LGT1|Q7LGT1_YEAST USO1 protein (Fragment) OS=Saccharomyces ... 37 0.52 tr|B5VFK8|B5VFK8_YEAS6 YDL058Wp-like protein OS=Saccharomyces ce... 37 0.52 tr|B3LGV6|B3LGV6_YEAS1 Intracellular protein transport protein U... 37 0.52 tr|A6ZXR7|A6ZXR7_YEAS7 Essential protein involved in intracellul... 37 0.52 tr|A4RQW4|A4RQW4_OSTLU Predicted protein OS=Ostreococcus lucimar... 37 0.68 tr|Q7PDQ6|Q7PDQ6_PLAYO ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 (Frag... 37 0.89 tr|Q8E6T2|Q8E6T2_STRA3 Putative uncharacterized protein gbs0479 ... 36 1.2 tr|A8JFK8|A8JFK8_CHLRE Hypothetical zinc finger protein OS=Chlam... 36 1.2 tr|B4IEW7|B4IEW7_DROSE GM13343 OS=Drosophila sechellia GN=GM1334... 36 1.2 tr|A4HSS9|A4HSS9_LEIIN Putative uncharacterized protein OS=Leish... 36 1.2 tr|Q2HBR4|Q2HBR4_CHAGB Putative uncharacterized protein OS=Chaet... 36 1.2 tr|Q2GPN5|Q2GPN5_CHAGB Putative uncharacterized protein OS=Chaet... 36 1.2 tr|B1H221|B1H221_RAT LOC363326 protein OS=Rattus norvegicus GN=L... 36 1.5 tr|A3B9G7|A3B9G7_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.5 tr|Q57ZJ1|Q57ZJ1_9TRYP Putative uncharacterized protein OS=Trypa... 36 1.5 tr|Q4FWL7|Q4FWL7_LEIMA Putative uncharacterized protein OS=Leish... 36 1.5 tr|B7RZL8|B7RZL8_9GAMM D-isomer specific 2-hydroxyacid dehydroge... 35 2.0 tr|Q4QJ41|Q4QJ41_LEIMA Putative uncharacterized protein OS=Leish... 35 2.0 tr|Q4E4I0|Q4E4I0_TRYCR Putative uncharacterized protein OS=Trypa... 35 2.0 tr|Q4DWW6|Q4DWW6_TRYCR Putative uncharacterized protein OS=Trypa... 35 2.0 tr|Q4DTV9|Q4DTV9_TRYCR Putative uncharacterized protein OS=Trypa... 35 2.0
>tr|Q258Y6|Q258Y6_ORYSA H0624F09.12 protein OS=Oryza sativa GN=H0624F09.12 PE=4 SV=1 Length = 711
Score = 42.4 bits (98), Expect = 0.016 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 16/138 (11%) Frame = -2
Query: 501 CFHYARGRCFRGSACKFLHPERETG---QERGVQLADGP----------VAGSKNVDPTT 361 C+++ +G C +G C F H + G E+ V+++ P + G K+ +T Sbjct: 118 CYYFKKGNCLKGDRCAFYHGPQSVGNNPSEQVVKVSSLPLEQLQTQKNDLLGIKDSVQST 177
Query: 360 NRPLIGADPVLHVVNEGKVEHVGKSTVSTRDRTDDSQAVNSTA---SKEGKLQAEQPALV 190 N GA + NE V +STV++ + V S A K K+++ PA + Sbjct: 178 NSIQHGAP----ITNERGKTAVDRSTVNSARTATVAIPVASNAMSCPKSEKVKSSTPAAL 233
Query: 189 KDSQALSHGSDFEKIEQS 136 K+S S G D + Q+ Sbjct: 234 KESFTTSSGGDHPECYQN 251
>tr|A2XYU2|A2XYU2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17873 PE=4 SV=1 Length = 711
Score = 42.4 bits (98), Expect = 0.016 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 16/138 (11%) Frame = -2
Query: 501 CFHYARGRCFRGSACKFLHPERETG---QERGVQLADGP----------VAGSKNVDPTT 361 C+++ +G C +G C F H + G E+ V+++ P + G K+ +T Sbjct: 118 CYYFKKGNCLKGDRCAFYHGPQSVGNNPSEQVVKVSSLPLEQLQTQKNDLLGIKDSVQST 177
Query: 360 NRPLIGADPVLHVVNEGKVEHVGKSTVSTRDRTDDSQAVNSTA---SKEGKLQAEQPALV 190 N GA + NE V +STV++ + V S A K K+++ PA + Sbjct: 178 NSIQHGAP----ITNERGKTAVDRSTVNSARTATVAIPVASNAMSCPKSEKVKSSTPAAL 233
Query: 189 KDSQALSHGSDFEKIEQS 136 K+S S G D + Q+ Sbjct: 234 KESFTTSSGGDHPECYQN 251
>tr|A7P6E8|A7P6E8_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034038001 PE=4 SV=1 Length = 438
Score = 38.9 bits (89), Expect = 0.18 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -2
Query: 504 VCFHYARGRCFRGSACKFLHPERE 433 VC HYA+GRC+ G CKFLH R+ Sbjct: 412 VCRHYAKGRCYFGDNCKFLHDLRK 435
>tr|A7SEJ9|A7SEJ9_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g244704 PE=4 SV=1 Length = 2423
Score = 38.5 bits (88), Expect = 0.23 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 3/116 (2%) Frame = -2
Query: 435 ETGQERGVQLADGPVAGSKNVDPTTNRPLIGADPVLHVVNEGKVEHVGKSTVSTRDRTDD 256 ET RG Q+ + +V TT GA+ + +V N + G S+ ++ Sbjct: 961 ETEHYRGQQICSTTITQDNHVPETTLAEKRGAEAIQNVYNIRGLNPEGMSSCDESSNKEN 1020
Query: 255 SQAVNSTASKEGKLQAEQPALVKDSQALSHGSDFEKIEQSEKTPGEHLE---TGKG 97 + + ASKE +++ ++ SQ+ S K E SE+TPG+ E +GKG Sbjct: 1021 EE-IQKDASKESDKVSKRSSVKDKSQSPS------KAESSERTPGKTTEKSPSGKG 1069
>tr|A2E032|A2E032_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_490890 PE=4 SV=1 Length = 1042
Score = 38.5 bits (88), Expect = 0.23 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 6/104 (5%) Frame = -2
Query: 315 EGKVEHVGKSTVSTRDRTDDSQAVNSTASK-----EGKLQ-AEQPALVKDSQALSHGSDF 154 E EHV + TV + TD+ Q NS++S+ E KL+ +++P K+ A + D Sbjct: 367 ETATEHVKEETVESVQETDEKQQENSSSSQKDNENEQKLENSQEPRTQKEEIAETIQEDT 426
Query: 153 EKIEQSEKTPGEHLETGKGADEPVKIVVDNDQLDLVKSNINSDE 22 EK +++ +T E ++ + DE K + ++ Q +L NI E Sbjct: 427 EKQQENNETSPEPVKE-EINDEEQKEISNSTQNELEPENIPEQE 469
>tr|A9RJZ2|A9RJZ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159541 PE=4 SV=1 Length = 1268
Score = 38.1 bits (87), Expect = 0.31 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -2
Query: 510 PAVCFHYARGRCFRGSACKFLHPE 439 P VC +ARGRC RG+ C+F H E Sbjct: 609 PPVCLDFARGRCKRGNVCRFAHTE 632
>tr|Q384H2|Q384H2_9TRYP Putative uncharacterized protein OS=Trypanosoma brucei GN=Tb11.01.0090 PE=4 SV=1 Length = 207
Score = 37.7 bits (86), Expect = 0.40 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = -2
Query: 504 VCFHYARGRCFRGSACKFLHPER 436 VC HYA GRC RGS C+F H R Sbjct: 50 VCRHYAEGRCNRGSTCRFHHETR 72
>tr|Q22CU0|Q22CU0_TETTH Zinc finger, C2H2 type family protein OS=Tetrahymena thermophila SB210 GN=TTHERM_01016010 PE=4 SV=1 Length = 844
Score = 37.7 bits (86), Expect = 0.40 Identities = 26/100 (26%), Positives = 48/100 (48%) Frame = -2
Query: 309 KVEHVGKSTVSTRDRTDDSQAVNSTASKEGKLQAEQPALVKDSQALSHGSDFEKIEQSEK 130 K+++ K R RT ++ + SK+GK+Q +Q D + L+ S I+ E+ Sbjct: 360 KLQNKQKVQDEKRKRTSKNKIQIESKSKDGKIQTKQNK--SDLKNLAQNSSQSYIDDEEE 417
Query: 129 TPGEHLETGKGADEPVKIVVDNDQLDLVKSNINSDESLED 10 E +E + E + + DN Q +L K NS + +++ Sbjct: 418 ---EDVEENQSDQESINTISDNQQEELYKQKRNSSKRVKE 454
>tr|B0WYI4|B0WYI4_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ012077 PE=4 SV=1 Length = 1542
Score = 37.4 bits (85), Expect = 0.52 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 5/118 (4%) Frame = -2
Query: 432 TGQERGVQLADGPVAGSKNVDPTTNRPLIGADPVLHVVNEGKV----EHVGKSTVSTRDR 265 T QE G + AD +AG+K IG + +V E K V Sbjct: 458 TYQESGTRNADINLAGTKKTSLNIAGSTIGPSDTEKIAENYQVKSSDESNSKKIVDKLQS 517
Query: 264 TD-DSQAVNSTASKEGKLQAEQPALVKDSQALSHGSDFEKIEQSEKTPGEHLETGKGA 94 T S++ N+ GK+ EQ +++D QA +FE + +S+KT +H TG A Sbjct: 518 TGTSSRSSNNLNENTGKISNEQ--ILEDQQA-----NFETLNESDKTSEKHKSTGNSA 568
>tr|Q7LGT1|Q7LGT1_YEAST USO1 protein (Fragment) OS=Saccharomyces cerevisiae GN=USO1 PE=2 SV=1 Length = 1268
Score = 37.4 bits (85), Expect = 0.52 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Frame = -2
Query: 324 VVNEGKVEHVGKSTVSTRDRTDDSQAVNSTASKE---GKLQAEQPALVKDSQALSHGSDF 154 + N K + +S +S +T + N+ E ++Q + A K+ + L+ GS Sbjct: 797 ITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSST 856
Query: 153 EKIEQSEK--TPGEHLETGKGADEPVKIVVDNDQLDLVKSNINSDESLEDKR 4 E SEK T + L + +E +DN + +L K ++++DE LE+K+ Sbjct: 857 ITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQ 908
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