BP918818
Clone id YMU001_000117_G09
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGACATGTTCAACGTTCCTAGAACCCTTAGTTCAGGGTGACGTCATTGCATAGCCACTCA
TCAATTCATCAGTGATTGTCTCTGAAATATAAATGTATATGAGCCAGATTCAGAACAGCA
AATTGTCCCCACATTAGACTAGTCTAAGGTTCAGAACCACCTTTCTGTGTTAAACAGCAT
AATAAATAAATCATGTTCTGGGGGCAATGATGCGGCAAAGGGCAGACCAAAAAGAAACAC
CACATTCATAATTGGCAAAGAAAACAAAGTAGAGCACATGGGTATTGAGACCAGTGGGAT
ACAGAAGTACTGTACGTCCCTAATGCCGCTGTACAAACCTCACTCATTTCAACTGCTAGT
CTGCCTGTTGCCTTTGCGTGGGCCACCGTCCAAAACACACCCACCCAAATTTGACTGCCC
TTAAAGCAGCTGCACAACCCCTGGAATCGACAATGCTGGATCAGTTATACCATAGGTGTA
GTCCCTGTCTTCACGGGCACCTCAGGTGGGCCTTACACCCTTGGCATTGCTTCTCTTG
■■Homology search results ■■ -
sp_hit_id Q9LUT9
Definition sp|Q9LUT9|FB150_ARATH Putative F-box protein At3g17320 OS=Arabidopsis thaliana
Align length 43
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918818|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_G09.
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9LUT9|FB150_ARATH Putative F-box protein At3g17320 OS=Arabid... 32 1.4
sp|Q8ST90|Y201_ENCCU Uncharacterized protein ECU02_0010/ECU04_17... 30 7.0
sp|Q9JKT8|TR114_RAT Taste receptor type 2 member 114 OS=Rattus n... 30 9.2

>sp|Q9LUT9|FB150_ARATH Putative F-box protein At3g17320
OS=Arabidopsis thaliana GN=At3g17320 PE=4 SV=1
Length = 389

Score = 32.3 bits (72), Expect = 1.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2

Query: 227 PKRNTTFIIGKENKVEHMGIETSGIQKYCTSLMPLYKPHSFQL 355
P RNT +I+G++ ++ + + S + KYC L Y P S Q+
Sbjct: 348 PTRNTAYIVGEDGYIKPVDLGES-VHKYCFPLACSYVPSSVQI 389


>sp|Q8ST90|Y201_ENCCU Uncharacterized protein ECU02_0010/ECU04_1710
OS=Encephalitozoon cuniculi GN=ECU02_0010 PE=4 SV=1
Length = 220

Score = 30.0 bits (66), Expect = 7.0
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Frame = -2

Query: 383 AHAKATGRLAVEMSEVCTAALGTYSTSVSHWSQYPCA-------LLCFLCQL*MWCFFLV 225
+H K + L + +S +C L T S ++ SQ+P L CFLCQ
Sbjct: 45 SHLKGSPYL-LSISSLCP--LATSSCALLVHSQHPPRPSELSPPLSCFLCQKETLTSPRP 101

Query: 224 CPLPHHCPQNMIYLLCCLTQKGGSEP 147
P HHCP+++ Y + K S P
Sbjct: 102 SPPSHHCPESLTYQVHQPNPKSPSGP 127


>sp|Q9JKT8|TR114_RAT Taste receptor type 2 member 114 OS=Rattus
norvegicus GN=Tas2r114 PE=2 SV=1
Length = 309

Score = 29.6 bits (65), Expect = 9.2
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1

Query: 306 FCIPLVSIPMCSTLFSLPIMNVVFLFGLPFAASLPPEHDLFIMLFNT--ERWF*TLD*SN 133
F + L+ I + +P N++F+FGL A P H L ++L N+ +R F +
Sbjct: 238 FILHLIGITINVICLLVPENNLLFVFGLTIAFLYPCCHSLILILANSRLKRCFVRI---- 293

Query: 132 VGTICCSESG 103
+ + CSE G
Sbjct: 294 LQQLMCSEEG 303


tr_hit_id B1I2X1
Definition tr|B1I2X1|B1I2X1_DESAP Diguanylate cyclase with PAS/PAC sensor OS=Desulforudis audaxviator (strain MP104C)
Align length 85
Score (bit) 35.4
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918818|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_G09.
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1I2X1|B1I2X1_DESAP Diguanylate cyclase with PAS/PAC sensor O... 35 1.8
tr|B4FH72|B4FH72_MAIZE F-box domain containing protein OS=Zea ma... 33 6.6
tr|B6L5I4|B6L5I4_BRAFL Putative uncharacterized protein OS=Branc... 33 6.7
tr|A8J868|A8J868_CHLRE Predicted protein (Fragment) OS=Chlamydom... 33 8.6
tr|B1STL3|B1STL3_9BACI Putative uncharacterized protein OS=Geoba... 33 8.8

>tr|B1I2X1|B1I2X1_DESAP Diguanylate cyclase with PAS/PAC sensor
OS=Desulforudis audaxviator (strain MP104C) GN=Daud_0823
PE=4 SV=1
Length = 755

Score = 35.4 bits (80), Expect = 1.8
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1

Query: 253 WQRKQSRAHGY*DQWDTEVLYVPNAAVQTSLISTASL---PVAFAWATVQNTPTQI*LPL 423
W R+ R G + D VPNA I A+L +A W T Q TP PL
Sbjct: 161 WNREAERIFGIVREDD-----VPNAETLLQTIQPAALLDNALANVWETGQPTP-----PL 210

Query: 424 KQLHNPWNRQCWISYTIGVVPVFTG 498
+ L +R+CW+ T+ V F G
Sbjct: 211 ELLLKQGDRECWLLMTLIPVTGFNG 235


>tr|B4FH72|B4FH72_MAIZE F-box domain containing protein OS=Zea mays
PE=2 SV=1
Length = 299

Score = 33.5 bits (75), Expect = 6.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2

Query: 293 WSQYPCALLCFLCQL*MWCFFLVCPLPHHCPQN 195
W LC C+ +W L C PHHCP+N
Sbjct: 217 WKFVSNRALCAHCRSVIWLSNLTCASPHHCPKN 249


>tr|B6L5I4|B6L5I4_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_66399 PE=4 SV=1
Length = 2060

Score = 33.5 bits (75), Expect = 6.7
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1

Query: 253 WQRKQSRAHGY*DQWDTEVLYVPNAAVQTS--LISTASLPVAFAWATVQN 396
W + Q HG+ DQW + +Y+ N Q S ++ S PV+ W V N
Sbjct: 964 WWQPQHSGHGF-DQWALDGIYIGNTGSQVSENVVGDLSDPVSEVWMEVNN 1012


>tr|A8J868|A8J868_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_120200 PE=4
SV=1
Length = 149

Score = 33.1 bits (74), Expect = 8.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2

Query: 98 YEPDSEQQIVPTLD*SKVQNHLSVLNSIINKSCSGGNDAA 217
YEP SEQQ+ LD +++ H++ N+ I C GG A
Sbjct: 71 YEPPSEQQMDAILD--RIERHITRTNTAITLHCGGGKGRA 108


>tr|B1STL3|B1STL3_9BACI Putative uncharacterized protein
OS=Geobacillus sp. WCH70 GN=GWCH70DRAFT_2255 PE=4 SV=1
Length = 283

Score = 33.1 bits (74), Expect = 8.8
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1

Query: 322 NAAVQTSLISTASLPVAFAWATVQNTPTQI*LPLKQ---LHNPWNRQCWISYTIGVVPVF 492
NAA+ +LI+ A+L + + A + N+ T + L LH P + WI G+V VF
Sbjct: 61 NAAIPFTLIAAATLHLPASVAAILNSTTPLFTALVSRWFLHEPLYAKKWIGIGFGIVGVF 120

Query: 493 TGTSGGPYTL 522
P L
Sbjct: 121 ALVGWSPVPL 130