BP918816
Clone id YMU001_000117_G07
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TAAAGGGGAGCTGCGTAGAGCGGAGCAATCAAGATGTGTAGGTCTCTTCTTCTTCTTGTC
TTGTCGCATAGATCTCTGAGGCGTCTTCCCATGCTGCAATGCACCTATGCATGTGATTGC
TCTCTCTCTCTTCCCACGATGTTAAAATTCTCTTCTTCTCTCTCTCTCACAGATGCGCAA
GCGGCAGAACTCTCTCTGTCAGCCCTTCTGTTCCCATTCGCCTGCAACAAAGAGCCCTGT
CCCATTTTCCAGTGTCGGGGATAGCAAGAGCTGCTAGCCATCATGCACAAGCCCAACATG
ATTCAAACGGCCTGCTCTTCACTGTCTTGCAACACAACCATCCACAAACTGTCGCGTGCA
CCCCTGCTCAGCAACTGCGCACCAGAATGCTCTGCCCAACAAAAAAATCTTTCTCCATCT
CTGAACAGCAGCCCTTTACAACTGCAAGAAAAATCTCTCTCCTCCACGTGCCTTCCTTTT
CCTACCCACTGCATTGACTCA
■■Homology search results ■■ -
sp_hit_id P87236
Definition sp|P87236|MU154_SCHPO Meiotically up-regulated gene 154 protein OS=Schizosaccharomyces pombe
Align length 34
Score (bit) 30.8
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918816|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_G07.
(501 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P87236|MU154_SCHPO Meiotically up-regulated gene 154 protein ... 31 3.7
sp|Q9TTD8|PROP1_CANFA Homeobox protein prophet of Pit-1 OS=Canis... 30 6.3
sp|O75360|PROP1_HUMAN Homeobox protein prophet of Pit-1 OS=Homo ... 30 8.2
sp|Q3LU38|PROP1_ALOBE Homeobox protein prophet of Pit-1 OS=Aloua... 30 8.2

>sp|P87236|MU154_SCHPO Meiotically up-regulated gene 154 protein
OS=Schizosaccharomyces pombe GN=mug154 PE=1 SV=1
Length = 316

Score = 30.8 bits (68), Expect = 3.7
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3

Query: 162 LSHRCASGRTLSVSPSVPIRLQQRALSHFPVSGI 263
L HR +S L+ +P PI LQ+R++ H SGI
Sbjct: 262 LEHRSSSHDHLTSTPRTPIALQRRSVHHLHDSGI 295


>sp|Q9TTD8|PROP1_CANFA Homeobox protein prophet of Pit-1 OS=Canis
familiaris GN=PROP1 PE=3 SV=1
Length = 226

Score = 30.0 bits (66), Expect = 6.3
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +2

Query: 167 SQMRKRQNSLCQPFCSHSPATKSPVPFSSVGDSKXXXXXXXXXXXFKRPALHCLATQPST 346
++ RK++ SL QP SPAT S S F P H L +QPST
Sbjct: 122 AKQRKQERSLLQPLAHLSPATFSGFLPESPACPYSYPTPPPPMTCFPHPYNHALPSQPST 181


>sp|O75360|PROP1_HUMAN Homeobox protein prophet of Pit-1 OS=Homo
sapiens GN=PROP1 PE=1 SV=1
Length = 226

Score = 29.6 bits (65), Expect = 8.2
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +2

Query: 167 SQMRKRQNSLCQPFCSHSPATKSPVPFSSVGDSKXXXXXXXXXXXFKRPALHCLATQPST 346
++ RK++ SL QP SPA S S F P H L +QPST
Sbjct: 122 AKQRKQERSLLQPLAHLSPAAFSSFLPESTACPYSYAAPPPPVTCFPHPYSHALPSQPST 181


>sp|Q3LU38|PROP1_ALOBE Homeobox protein prophet of Pit-1 OS=Alouatta
belzebul GN=PROP1 PE=3 SV=1
Length = 226

Score = 29.6 bits (65), Expect = 8.2
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +2

Query: 167 SQMRKRQNSLCQPFCSHSPATKSPVPFSSVGDSKXXXXXXXXXXXFKRPALHCLATQPST 346
++ RK++ SL QP SPAT S S F P H +QPST
Sbjct: 122 AKQRKQERSLLQPLAHLSPATFSGFLPESPAGPYSYTTPPPPVTCFPHPYSHAFPSQPST 181


tr_hit_id A4RTZ1
Definition tr|A4RTZ1|A4RTZ1_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901)
Align length 53
Score (bit) 33.9
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918816|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_G07.
(501 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4RTZ1|A4RTZ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 34 4.4
tr|B4QWJ8|B4QWJ8_DROSI GD18627 OS=Drosophila simulans GN=GD18627... 33 5.7
tr|Q9VHB0|Q9VHB0_DROME CG8273 OS=Drosophila melanogaster GN=CG82... 33 9.7
tr|Q8IHA8|Q8IHA8_DROME AT18855p OS=Drosophila melanogaster GN=CG... 33 9.7
tr|B0R9Z1|B0R9Z1_HALS3 Transducer protein car OS=Halobacterium s... 33 9.7
tr|O93775|O93775_HALSA Car protein OS=Halobacterium salinarium G... 33 9.7
tr|O06022|O06022_HALSA Soluble transducer protein HtH OS=Halobac... 33 9.7

>tr|A4RTZ1|A4RTZ1_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=SDG3501 PE=4 SV=1
Length = 1782

Score = 33.9 bits (76), Expect = 4.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = -2

Query: 485 VGKGRHVEERDFSCSCKGLLF------RDGERFFCWAEHSGAQLLSRGARDSL 345
VG+ RDF+ +C ++F R ER +CWA G +RG R L
Sbjct: 69 VGRAPEAVRRDFAAACCCVMFYGPSGTRGRERDYCWAPAEGLMAWARGVRRGL 121


>tr|B4QWJ8|B4QWJ8_DROSI GD18627 OS=Drosophila simulans GN=GD18627
PE=4 SV=1
Length = 899

Score = 33.5 bits (75), Expect = 5.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2

Query: 218 NGNRRADRESSAACASVREREEENFNIVGREREQSHA*VHCSMGRR 81
NG+R ADR + AS + R+E + + + E+S+ S GRR
Sbjct: 309 NGHREADRSKGSESASTKSRQEHDLSDISLSDEESYLREKASNGRR 354


>tr|Q9VHB0|Q9VHB0_DROME CG8273 OS=Drosophila melanogaster GN=CG8273
PE=1 SV=1
Length = 874

Score = 32.7 bits (73), Expect = 9.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2

Query: 218 NGNRRADRESSAACASVREREEENFNIVGREREQSHA*VHCSMGRR 81
NG R ADR + AS + R+E++ + + E+S+ S GRR
Sbjct: 284 NGQREADRLKGSESASTKSRQEQDLSDISLSDEESYLREKASNGRR 329


>tr|Q8IHA8|Q8IHA8_DROME AT18855p OS=Drosophila melanogaster
GN=CG8273 PE=1 SV=1
Length = 886

Score = 32.7 bits (73), Expect = 9.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2

Query: 218 NGNRRADRESSAACASVREREEENFNIVGREREQSHA*VHCSMGRR 81
NG R ADR + AS + R+E++ + + E+S+ S GRR
Sbjct: 296 NGQREADRLKGSESASTKSRQEQDLSDISLSDEESYLREKASNGRR 341


>tr|B0R9Z1|B0R9Z1_HALS3 Transducer protein car OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=car PE=4
SV=1
Length = 452

Score = 32.7 bits (73), Expect = 9.7
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3

Query: 145 LTSWEERESNHMH--RCIAAWEDASEIYATRQEEE 47
+T W ER S+HM R A EDAS++++T +E E
Sbjct: 71 VTHWNERFSDHMKMARSDALGEDASDVFSTAEESE 105


>tr|O93775|O93775_HALSA Car protein OS=Halobacterium salinarium
GN=car PE=4 SV=1
Length = 452

Score = 32.7 bits (73), Expect = 9.7
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3

Query: 145 LTSWEERESNHMH--RCIAAWEDASEIYATRQEEE 47
+T W ER S+HM R A EDAS++++T +E E
Sbjct: 71 VTHWNERFSDHMKMARSDALGEDASDVFSTAEESE 105


>tr|O06022|O06022_HALSA Soluble transducer protein HtH
OS=Halobacterium salinarium PE=4 SV=1
Length = 451

Score = 32.7 bits (73), Expect = 9.7
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3

Query: 145 LTSWEERESNHMH--RCIAAWEDASEIYATRQEEE 47
+T W ER S+HM R A EDAS++++T +E E
Sbjct: 71 VTHWNERFSDHMKMARSDALGEDASDVFSTAEESE 105