BP918800 |
Clone id |
YMU001_000117_F02 |
Library |
YMU01 |
Length |
546 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000117_F02. |
Accession |
BP918800 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGAACAAGAATGGCCATCATTTAAAATCAAGTGGCTTCACAATACAGCTTGGAGCAGCCA ATCAGGTTGCAGTATCAACTTCCCCCTTTTTGCCCAGAGACATGTTGTGCGACCCACCCT AAACCATCATAAAGGCCCTCTCCAGTCAAAGCACAGCAAGCTTGAATGTGCCAATCATGG TTTTTGATGCTGTGGAGAGAGAGGGCATCACTGATCTCTGCCGCTGTCATTGCGCCTTTC AAATCCTGTTTGTTGGCAAAGACAAGTACAACCGCTTGCTGAAGCTCATCATGCTGCAAC AACCGGAAAAGCTCGTCTTTCACAAGAGCAATCCTTGCTCTATCTGTACTGTCTACTACA AGGAGAACTGCATGCGTGCCCCTGTAGTATGTTGCCCAGGATGGCCGCAAACTATCTTGA CCACCTAAATCCTAAACCTCGAATCTGATGTATTTAAAAATAACCTCCTCCACGTTGCTC CCGATGGTGGGCTGCGTGACCACCACATCCCCGAGATGAAGCTTATAAAGAGTGGTAGTC TTGCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q55AD9 |
Definition |
sp|Q55AD9|ARL5_DICDI ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum |
Align length |
150 |
Score (bit) |
197.0 |
E-value |
3.0e-50 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RFM8 |
Definition |
tr|A9RFM8|A9RFM8_PHYPA Arl5-family small GTPase OS=Physcomitrella patens subsp. patens |
Align length |
153 |
Score (bit) |
270.0 |
E-value |
5.0e-71 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918800|Adiantum capillus-veneris mRNA, clone: YMU001_000117_F02. (546 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RFM8|A9RFM8_PHYPA Arl5-family small GTPase OS=Physcomitrell... 270 5e-71 tr|A9RBU4|A9RBU4_PHYPA Arl5-family small GTPase OS=Physcomitrell... 265 1e-69 tr|A7NWX9|A7NWX9_VITVI Chromosome chr5 scaffold_2, whole genome ... 262 8e-69 tr|A9PG62|A9PG62_POPTR Putative uncharacterized protein OS=Popul... 256 4e-67 tr|Q2R1Y6|Q2R1Y6_ORYSJ ADP-ribosylation factor-like protein 5, p... 255 9e-67 tr|B8BLE7|B8BLE7_ORYSI Putative uncharacterized protein OS=Oryza... 255 9e-67 tr|B0FSK6|B0FSK6_9MAGN ADP ribosylation factor-like protein OS=A... 253 5e-66 tr|Q9LIK1|Q9LIK1_ARATH Similarity to ADP-ribosylation factor (Pu... 251 1e-65 tr|B4FA33|B4FA33_MAIZE ADP-ribosylation factor-like protein 5A O... 251 2e-65 tr|B6UGR7|B6UGR7_MAIZE ADP-ribosylation factor-like protein 5A O... 249 7e-65 tr|B4LC98|B4LC98_DROVI GJ12878 OS=Drosophila virilis GN=GJ12878 ... 203 6e-51 tr|B4J200|B4J200_DROGR GH15973 OS=Drosophila grimshawi GN=GH1597... 203 6e-51 tr|B4L950|B4L950_DROMO GI16622 OS=Drosophila mojavensis GN=GI166... 202 1e-50 tr|B4MKS4|B4MKS4_DROWI GK17000 OS=Drosophila willistoni GN=GK170... 201 2e-50 tr|A9UQL4|A9UQL4_MONBE Predicted protein OS=Monosiga brevicollis... 201 2e-50 tr|A8I4Q7|A8I4Q7_CHLRE Small ARF-related GTPase OS=Chlamydomonas... 200 4e-50 tr|Q9VSG8|Q9VSG8_DROME CG7197 OS=Drosophila melanogaster GN=CG71... 200 5e-50 tr|Q29F85|Q29F85_DROPS GA20174 OS=Drosophila pseudoobscura pseud... 200 5e-50 tr|B4QLL6|B4QLL6_DROSI GD13004 OS=Drosophila simulans GN=Dsim\GD... 200 5e-50 tr|B4PG53|B4PG53_DROYA GE21319 OS=Drosophila yakuba GN=Dyak\GE21... 200 5e-50 tr|B4HJF7|B4HJF7_DROSE GM24953 OS=Drosophila sechellia GN=GM2495... 200 5e-50 tr|B4H156|B4H156_DROPE GL22555 OS=Drosophila persimilis GN=GL225... 200 5e-50 tr|B3NFU8|B3NFU8_DROER GG15097 OS=Drosophila erecta GN=Dere\GG15... 200 5e-50 tr|B3M9D8|B3M9D8_DROAN GF23565 OS=Drosophila ananassae GN=GF2356... 199 6e-50 tr|A3CD06|A3CD06_ORYSJ Putative uncharacterized protein OS=Oryza... 197 3e-49 tr|Q2XYK6|Q2XYK6_DROME CG7197 (Fragment) OS=Drosophila melanogas... 196 5e-49 tr|Q2XYK5|Q2XYK5_DROSI CG7197 (Fragment) OS=Drosophila simulans ... 196 5e-49 tr|Q2XYK3|Q2XYK3_DROYA CG7197 (Fragment) OS=Drosophila yakuba GN... 196 5e-49 tr|Q2XYK1|Q2XYK1_DROER CG7197 (Fragment) OS=Drosophila erecta GN... 196 5e-49 tr|Q16I84|Q16I84_AEDAE Adp-ribosylation factor, arf OS=Aedes aeg... 196 9e-49
>tr|A9RFM8|A9RFM8_PHYPA Arl5-family small GTPase OS=Physcomitrella patens subsp. patens GN=Arl5A1 PE=3 SV=1 Length = 184
Score = 270 bits (689), Expect = 5e-71 Identities = 128/153 (83%), Positives = 144/153 (94%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+VVVTQPT+GSNVEE+++K IRFEV DLGGQ+ LR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEVVVTQPTVGSNVEELVYKNIRFEVWDLGGQERLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++VVDSTDRARI+++KDELF+LLQH++LQ AVVLVFANKQDLK AM AEISDALSLHSI Sbjct: 89 VMVVDSTDRARISIIKDELFKLLQHEDLQGAVVLVFANKQDLKDAMNPAEISDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQK 87 KNHDWHIQACCALTGEGL+DGLGWVAQHV+G K Sbjct: 149 KNHDWHIQACCALTGEGLWDGLGWVAQHVTGSK 181
>tr|A9RBU4|A9RBU4_PHYPA Arl5-family small GTPase OS=Physcomitrella patens subsp. patens GN=Arl5A2 PE=3 SV=1 Length = 184
Score = 265 bits (677), Expect = 1e-69 Identities = 124/153 (81%), Positives = 144/153 (94%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+VVVTQPT+GSNVEE+++K IRFEV DLGGQ+ LR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEVVVTQPTVGSNVEELVYKNIRFEVWDLGGQERLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++VVDSTDR+RI+++K+ELF+L+QH++LQ AVVLVFANKQDLK AM+ AEISD LSLHSI Sbjct: 89 VMVVDSTDRSRISIIKEELFKLMQHEDLQGAVVLVFANKQDLKDAMSPAEISDTLSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQK 87 KNHDWHIQACCALTGEGL+DGLGWVAQHV+G K Sbjct: 149 KNHDWHIQACCALTGEGLWDGLGWVAQHVTGSK 181
>tr|A7NWX9|A7NWX9_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020100001 PE=3 SV=1 Length = 183
Score = 262 bits (670), Expect = 8e-69 Identities = 121/152 (79%), Positives = 141/152 (92%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+VV T PT+GSNVEE+++K IRFEV DLGGQ+ LR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQERLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++V+DSTDRARI ++KDELFRLLQHD+LQ +V+LVFANKQD+K AMT AEI+DALSLHSI Sbjct: 89 IVVIDSTDRARITIMKDELFRLLQHDDLQNSVILVFANKQDIKDAMTPAEITDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQ 90 KNHDWHIQACCALTG+GLYDGLGW+AQ V+G+ Sbjct: 149 KNHDWHIQACCALTGDGLYDGLGWIAQRVTGK 180
>tr|A9PG62|A9PG62_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 183
Score = 256 bits (655), Expect = 4e-67 Identities = 119/152 (78%), Positives = 139/152 (91%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+VV T PT+GSNVEE+++K IRFEV DLGGQD LR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 + V+DSTDR RI+++KDE+FRLL HD+LQ +V+LVFANKQDLK AMT AEI+DALSLHSI Sbjct: 89 IAVIDSTDRDRISIMKDEIFRLLGHDDLQHSVILVFANKQDLKDAMTPAEITDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQ 90 KNHDWHIQACCALTG+GL+DGLGW+AQ V+G+ Sbjct: 149 KNHDWHIQACCALTGDGLHDGLGWIAQRVTGK 180
>tr|Q2R1Y6|Q2R1Y6_ORYSJ ADP-ribosylation factor-like protein 5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0586900 PE=2 SV=2 Length = 184
Score = 255 bits (652), Expect = 9e-67 Identities = 122/152 (80%), Positives = 138/152 (90%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+ V PTIGSNVEEV+FK IRFEV DLGGQ+SLR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEAVTAAPTIGSNVEEVVFKNIRFEVWDLGGQESLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++V+DSTDRARI ++KDELFRLLQH +L+ AVVLVFANKQDLK AM+ AEI+DALSLHSI Sbjct: 89 IVVIDSTDRARINIIKDELFRLLQHGDLEGAVVLVFANKQDLKDAMSPAEITDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQ 90 KNHDWHIQA CA+TGEGLYDGLGW+AQ V+G+ Sbjct: 149 KNHDWHIQASCAITGEGLYDGLGWIAQKVAGK 180
>tr|B8BLE7|B8BLE7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36735 PE=4 SV=1 Length = 184
Score = 255 bits (652), Expect = 9e-67 Identities = 122/152 (80%), Positives = 138/152 (90%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+ V PTIGSNVEEV+FK IRFEV DLGGQ+SLR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEAVTAAPTIGSNVEEVVFKNIRFEVWDLGGQESLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++V+DSTDRARI ++KDELFRLLQH +L+ AVVLVFANKQDLK AM+ AEI+DALSLHSI Sbjct: 89 IVVIDSTDRARINIIKDELFRLLQHGDLEGAVVLVFANKQDLKDAMSPAEITDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQ 90 KNHDWHIQA CA+TGEGLYDGLGW+AQ V+G+ Sbjct: 149 KNHDWHIQASCAITGEGLYDGLGWIAQKVAGK 180
>tr|B0FSK6|B0FSK6_9MAGN ADP ribosylation factor-like protein OS=Adonis aestivalis var. palaestina PE=2 SV=1 Length = 184
Score = 253 bits (646), Expect = 5e-66 Identities = 119/156 (76%), Positives = 140/156 (89%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+VV T PT+GSNVEE+++K IRFEV DLGGQ+ LR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQERLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++V+DSTDRARI+++KDEL RLLQH++L+ AVVLVFANKQDLK AM AEI+DALSLHSI Sbjct: 89 IVVIDSTDRARISIMKDELLRLLQHEDLEHAVVLVFANKQDLKDAMPPAEITDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQKGGS 78 KNHDWHIQ+CCALTG+GL+DGLGW+AQ V+ K S Sbjct: 149 KNHDWHIQSCCALTGDGLHDGLGWIAQRVTTGKATS 184
>tr|Q9LIK1|Q9LIK1_ARATH Similarity to ADP-ribosylation factor (Putative ADP-ribosylation factor) (ADP-ribosylation factor, putative) OS=Arabidopsis thaliana GN=At3g22950 PE=2 SV=1 Length = 183
Score = 251 bits (642), Expect = 1e-65 Identities = 118/152 (77%), Positives = 138/152 (90%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+VV T PT+GSNVEE+++K IRFEV DLGGQD LR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++V+DSTDRARI+ +KDEL RLL H++LQ +V+LVFANKQDLK AMT AEI+DAL+LHSI Sbjct: 89 IVVIDSTDRARISFMKDELARLLGHEDLQNSVILVFANKQDLKDAMTPAEITDALNLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQ 90 KNHDWHIQA CA+TGEGLYDGLGW+AQ V+G+ Sbjct: 149 KNHDWHIQASCAVTGEGLYDGLGWIAQKVTGK 180
>tr|B4FA33|B4FA33_MAIZE ADP-ribosylation factor-like protein 5A OS=Zea mays PE=2 SV=1 Length = 184
Score = 251 bits (641), Expect = 2e-65 Identities = 120/156 (76%), Positives = 138/156 (88%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+ V PTIGSNVEEV+FK +RFEV DLGGQ+SLR SWATYYRGTHAV Sbjct: 29 GKTTTLYKLHLGEAVTAAPTIGSNVEEVVFKNLRFEVWDLGGQESLRTSWATYYRGTHAV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++V+DSTDRARI ++KDELFRLLQH +L+ AVVLVFANKQDLK AM AEI+DALSLHSI Sbjct: 89 IVVIDSTDRARINIIKDELFRLLQHADLEGAVVLVFANKQDLKDAMAPAEITDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQKGGS 78 K+HDWHIQA CA+TG+GLYDGLGW+AQ V+G+ S Sbjct: 149 KDHDWHIQASCAITGDGLYDGLGWIAQKVAGKATAS 184
>tr|B6UGR7|B6UGR7_MAIZE ADP-ribosylation factor-like protein 5A OS=Zea mays PE=2 SV=1 Length = 184
Score = 249 bits (636), Expect = 7e-65 Identities = 119/156 (76%), Positives = 137/156 (87%) Frame = -2
Query: 545 GKTTTLYKLHLGDVVVTQPTIGSNVEEVIFKYIRFEV*DLGGQDSLRPSWATYYRGTHAV 366 GKTTTLYKLHLG+ V PTIGSNVEEV+FK +RFEV DLGGQ+SLR SWATYYRGTH V Sbjct: 29 GKTTTLYKLHLGEAVTAAPTIGSNVEEVVFKNLRFEVWDLGGQESLRTSWATYYRGTHXV 88
Query: 365 LLVVDSTDRARIALVKDELFRLLQHDELQQAVVLVFANKQDLKGAMTAAEISDALSLHSI 186 ++V+DSTDRARI ++KDELFRLLQH +L+ AVVLVFANKQDLK AM AEI+DALSLHSI Sbjct: 89 IVVIDSTDRARINIIKDELFRLLQHADLEGAVVLVFANKQDLKDAMAPAEITDALSLHSI 148
Query: 185 KNHDWHIQACCALTGEGLYDGLGWVAQHVSGQKGGS 78 K+HDWHIQA CA+TG+GLYDGLGW+AQ V+G+ S Sbjct: 149 KDHDWHIQASCAITGDGLYDGLGWIAQKVAGKATAS 184
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