BP918731
Clone id YMU001_000116_H02
Library
Length 583
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000116_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCTCTCTCTCTCTGTGCACTTCTACCCGCCATGGCGCTTCTCCTTAGACGCCACCCTCC
ATAGCCGTCCTCAAACCTAACACCTGGTATTAGAGCCACACTGGCCATCCCCCTCTAGCT
CTTCTTCTTCAACGAACCCATCCCTCAGAAACCCTCAGATTAGTGGAATCCCCACACACC
CACATGCTACAAAGACCTATCATGAAGCGTTCCCGCCTCCCTGTGCTGATGCAAAACCAT
GTTCATCCTGGCCTTTTCTCCATTTTTGTGACAGTGTCAGCCTTCGGTAATTGTGAGTAC
GTACTTCTGGATGAGAATATGGTGCCATTGCAACGATCGTGCGTGATGCTTCTCTGCCTT
GGTACACTTATGTTGATGGGTAACACTCTATATGCACCTATACTACGCTTTTGCATGTGG
GTCTTTTCTCCATTTTTTGAGACAGTATCAGCCTTCGGTAATTGTGAGTACGTACTTCTG
GATGAGAATATGGTGCCATTGCAACGATCGTGGGCTGATGCTTCTCTGCCTTAGTACACT
TATGTTGATGGGTAACACTCTATATGCATTTATACTACGCTGA
■■Homology search results ■■ -
sp_hit_id Q7XPF8
Definition sp|Q7XPF8|HKT4_ORYSJ Cation transporter HKT4 OS=Oryza sativa subsp. japonica
Align length 67
Score (bit) 45.8
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918731|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_H02.
(583 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7XPF8|HKT4_ORYSJ Cation transporter HKT4 OS=Oryza sativa sub... 46 2e-04
sp|Q6H501|HKT6_ORYSJ Probable cation transporter HKT6 OS=Oryza s... 45 2e-04
sp|Q7XPF7|HKT7_ORYSJ Probable cation transporter HKT7 OS=Oryza s... 41 0.005
sp|Q84TI7|HKT1_ARATH Sodium transporter HKT1 OS=Arabidopsis thal... 38 0.042
sp|P14559|BLAC_STRAL Beta-lactamase OS=Streptomyces albus G PE=1... 31 3.9
sp|Q8CQQ7|Y2353_STAES Uncharacterized protein SE_2353 OS=Staphyl... 31 5.1
sp|Q9VRJ2|FIT2_DROME Protein FIT2 homolog OS=Drosophila melanoga... 31 5.2
sp|P35393|BLAC_STRLA Beta-lactamase OS=Streptomyces lavendulae P... 30 6.7
sp|Q9DA19|CIR_MOUSE CBF1-interacting corepressor OS=Mus musculus... 30 8.8
sp|P18916|ACHG_RAT Acetylcholine receptor subunit gamma OS=Rattu... 30 8.8

>sp|Q7XPF8|HKT4_ORYSJ Cation transporter HKT4 OS=Oryza sativa subsp.
japonica GN=HKT4 PE=1 SV=2
Length = 552

Score = 45.8 bits (107), Expect = 2e-04
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1

Query: 223 VLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXXXXXXXXYAPI 402
VL ++ F IF VS+F NC + L+ NM P +++ V ++P+
Sbjct: 251 VLKSKEINMYTFCIFTAVSSFANCGFTPLNSNMQPFRKNWVLLLLVIPQILAGNTLFSPL 310

Query: 403 LRFCMWV 423
LR C+WV
Sbjct: 311 LRLCVWV 317



Score = 31.2 bits (69), Expect = 3.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1

Query: 436 FETVSAFGNCEYVLLDENMVPLQRSW 513
F VS+F NC + L+ NM P +++W
Sbjct: 265 FTAVSSFANCGFTPLNSNMQPFRKNW 290


>sp|Q6H501|HKT6_ORYSJ Probable cation transporter HKT6 OS=Oryza
sativa subsp. japonica GN=HKT6 PE=2 SV=1
Length = 530

Score = 45.4 bits (106), Expect = 2e-04
Identities = 28/108 (25%), Positives = 49/108 (45%)
Frame = +1

Query: 154 LRLVESPHTHMLQRPIMKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQ 333
L LV S H I+KR + +++ FS+F +S+ GNC + ++ENM+ Q
Sbjct: 215 LNLVPSAHK------ILKRKGIGIIV--------FSVFTAISSVGNCGFTPVNENMIIFQ 260

Query: 334 RSCVXXXXXXXXXXXXXXXYAPILRFCMWVFSPFFETVSAFGNCEYVL 477
++ + +AP LR +W E ++ +C Y+L
Sbjct: 261 KNSILLLLILPQILAGNTLFAPCLRLMVW----SLEKITGKKDCRYIL 304


>sp|Q7XPF7|HKT7_ORYSJ Probable cation transporter HKT7 OS=Oryza
sativa subsp. japonica GN=HKT7 PE=2 SV=2
Length = 500

Score = 40.8 bits (94), Expect = 0.005
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1

Query: 256 FSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXXXXXXXXYAPILRFCMW 420
F++F TVS F NC ++ +ENMV +R +AP+L C+W
Sbjct: 201 FAVFTTVSTFSNCGFMPTNENMVVFKRDAPLQLLLVPQVLAGNTLFAPLLAACVW 255



Score = 30.4 bits (67), Expect = 6.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1

Query: 418 WVFSPFFETVSAFGNCEYVLLDENMVPLQR 507
W F+ F TVS F NC ++ +ENMV +R
Sbjct: 199 WTFA-VFTTVSTFSNCGFMPTNENMVVFKR 227


>sp|Q84TI7|HKT1_ARATH Sodium transporter HKT1 OS=Arabidopsis
thaliana GN=HKT1 PE=1 SV=1
Length = 506

Score = 37.7 bits (86), Expect = 0.042
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1

Query: 223 VLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRS 339
VL + P FS+F TVS F NC +V +ENM+ +++
Sbjct: 189 VLSSKEISPLTFSVFTTVSTFANCGFVPTNENMIIFRKN 227


>sp|P14559|BLAC_STRAL Beta-lactamase OS=Streptomyces albus G PE=1
SV=1
Length = 314

Score = 31.2 bits (69), Expect = 3.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3

Query: 302 TYSQLPKADTVTKMEKRPG*TWFCISTGRRERFMIGLCSMWVCGDST 162
TY +L D + ++R +W +T +RF GL W GD T
Sbjct: 214 TYGRLVLGDALNPRDRRLLTSWLLANTTSGDRFRAGLPDDWTLGDKT 260


>sp|Q8CQQ7|Y2353_STAES Uncharacterized protein SE_2353
OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=SE_2353 PE=4 SV=1
Length = 300

Score = 30.8 bits (68), Expect = 5.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = -3

Query: 518 SAHDRCNGTIFSSRSTYSQLPKADTVSKNGEKTHMQKRSIGAYRVLPINISVP---RQRS 348
SA+D + ++ S S S+ S K+ ++ +S L + SV + S
Sbjct: 213 SANDSMSSSLSESNSITSE-------SNTNSKSEIESKSTSTSEFLSESGSVSNSEKSES 265

Query: 347 ITHDRCNGTIFSSRSTYSQLPKAD 276
I+H + SS+STY Q PK +
Sbjct: 266 ISHSQSTSATPSSQSTYQQQPKEE 289


>sp|Q9VRJ2|FIT2_DROME Protein FIT2 homolog OS=Drosophila
melanogaster GN=CG10671 PE=2 SV=1
Length = 423

Score = 30.8 bits (68), Expect = 5.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2

Query: 404 YAFACGSFLHFLRQYQPSVIVSTYFW 481
Y CG LR + P ++++T+FW
Sbjct: 132 YTITCGDHKRMLRHHFPRIVIATFFW 157


>sp|P35393|BLAC_STRLA Beta-lactamase OS=Streptomyces lavendulae PE=3
SV=1
Length = 305

Score = 30.4 bits (67), Expect = 6.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3

Query: 305 STYSQLPKADTVTKMEKRPG*TWFCISTGRRERFMIGLCSMWVCGDST 162
+TY +L D + ++ W +T ERF GL + W GD T
Sbjct: 204 ATYGELVLGDALAPRDRERLTGWLLANTTSTERFRKGLPADWTLGDKT 251


>sp|Q9DA19|CIR_MOUSE CBF1-interacting corepressor OS=Mus musculus
GN=Cir PE=1 SV=1
Length = 450

Score = 30.0 bits (66), Expect = 8.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1

Query: 352 EASRTIVAMAPY--SHPEVRTHNYRRLTLSQKWRKGQDEHG 236
E+SR + +PY H EVR+ +R + QK RKG HG
Sbjct: 400 ESSRRSRSRSPYRQKHREVRSRPHRSPSEEQKGRKGTRSHG 440


>sp|P18916|ACHG_RAT Acetylcholine receptor subunit gamma OS=Rattus
norvegicus GN=Chrng PE=2 SV=2
Length = 519

Score = 30.0 bits (66), Expect = 8.8
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1

Query: 163 VESPHTHMLQRPIMK--RSRLPVLMQNHVHP 249
+ SPHTH + R + K LP L++ HVHP
Sbjct: 331 LRSPHTHSMARGVRKVFLRLLPQLLRMHVHP 361


tr_hit_id Q0E3H2
Definition tr|Q0E3H2|Q0E3H2_ORYSJ Os02g0175000 protein OS=Oryza sativa subsp. japonica
Align length 108
Score (bit) 45.4
E-value 0.002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918731|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_H02.
(583 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0E3H2|Q0E3H2_ORYSJ Os02g0175000 protein OS=Oryza sativa subs... 45 0.002
tr|B8AIK1|B8AIK1_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002
tr|A3A3N7|A3A3N7_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002
tr|Q94KC8|Q94KC8_MESCR Putative potassium-sodium transporter OS=... 45 0.003
tr|Q01KD6|Q01KD6_ORYSA OSIGBa0113I13.11 protein OS=Oryza sativa ... 45 0.003
tr|B6QTE2|B6QTE2_PENMA Putative uncharacterized protein OS=Penic... 42 0.025
tr|A7QLF2|A7QLF2_VITVI Chromosome chr11 scaffold_118, whole geno... 42 0.033
tr|A5AN75|A5AN75_VITVI Putative uncharacterized protein OS=Vitis... 42 0.033
tr|A9SBR9|A9SBR9_PHYPA Na+ transporter OS=Physcomitrella patens ... 41 0.043
tr|Q0JAB3|Q0JAB3_ORYSJ Os04g0607600 protein OS=Oryza sativa subs... 41 0.056
tr|Q01KD4|Q01KD4_ORYSA OSIGBa0113I13.13 protein OS=Oryza sativa ... 41 0.056
tr|B8ATV6|B8ATV6_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.056
tr|B0D8N6|B0D8N6_LACBS Predicted protein OS=Laccaria bicolor (st... 40 0.12
tr|A7QLF0|A7QLF0_VITVI Chromosome chr11 scaffold_118, whole geno... 38 0.36
tr|A7QLE0|A7QLE0_VITVI Chromosome chr11 scaffold_118, whole geno... 38 0.36
tr|Q0WQW6|Q0WQW6_ARATH Sodium transporter OS=Arabidopsis thalian... 38 0.47
tr|Q2GMG5|Q2GMG5_CHAGB Putative uncharacterized protein OS=Chaet... 38 0.47
tr|A7F5W3|A7F5W3_SCLS1 Putative uncharacterized protein OS=Scler... 38 0.47
tr|Q875C6|Q875C6_PODAN CDS of PaTrk2 gene related to potassium t... 36 1.4
tr|A0N0D6|A0N0D6_TRIMO Putative sodium transporter HKT7-A2 OS=Tr... 36 1.8
tr|A5C1H7|A5C1H7_VITVI Putative uncharacterized protein OS=Vitis... 35 2.4
tr|Q7S450|Q7S450_NEUCR Putative uncharacterized protein OS=Neuro... 35 2.4
tr|A6RZE5|A6RZE5_BOTFB Putative uncharacterized protein OS=Botry... 35 2.4
tr|Q9FVK0|Q9FVK0_EUCCA Potassium-sodium symporter HKT2 OS=Eucaly... 35 3.1
tr|A7QLD9|A7QLD9_VITVI Chromosome chr11 scaffold_118, whole geno... 35 3.1
tr|A7QLD8|A7QLD8_VITVI Chromosome chr11 scaffold_118, whole geno... 35 3.1
tr|A5AEY3|A5AEY3_VITVI Putative uncharacterized protein OS=Vitis... 35 3.1
tr|B6MGQ5|B6MGQ5_BRAFL Putative uncharacterized protein OS=Branc... 35 4.0
tr|Q9LLM4|Q9LLM4_EUCCA Potassium-sodium symporter HKT1 OS=Eucaly... 35 4.0
tr|Q5KL75|Q5KL75_CRYNE Potassium ion transporter, putative OS=Cr... 35 4.0

>tr|Q0E3H2|Q0E3H2_ORYSJ Os02g0175000 protein OS=Oryza sativa subsp.
japonica GN=Os02g0175000 PE=4 SV=1
Length = 531

Score = 45.4 bits (106), Expect = 0.002
Identities = 28/108 (25%), Positives = 49/108 (45%)
Frame = +1

Query: 154 LRLVESPHTHMLQRPIMKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQ 333
L LV S H I+KR + +++ FS+F +S+ GNC + ++ENM+ Q
Sbjct: 215 LNLVPSAHK------ILKRKGIGIIV--------FSVFTAISSVGNCGFTPVNENMIIFQ 260

Query: 334 RSCVXXXXXXXXXXXXXXXYAPILRFCMWVFSPFFETVSAFGNCEYVL 477
++ + +AP LR +W E ++ +C Y+L
Sbjct: 261 KNSILLLLILPQILAGNTLFAPCLRLMVW----SLEKITGKKDCRYIL 304


>tr|B8AIK1|B8AIK1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_06054 PE=4 SV=1
Length = 458

Score = 45.4 bits (106), Expect = 0.002
Identities = 28/108 (25%), Positives = 49/108 (45%)
Frame = +1

Query: 154 LRLVESPHTHMLQRPIMKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQ 333
L LV S H I+KR + +++ FS+F +S+ GNC + ++ENM+ Q
Sbjct: 215 LNLVPSAHK------ILKRKGIGIIV--------FSVFTAISSVGNCGFTPVNENMIIFQ 260

Query: 334 RSCVXXXXXXXXXXXXXXXYAPILRFCMWVFSPFFETVSAFGNCEYVL 477
++ + +AP LR +W E ++ +C Y+L
Sbjct: 261 KNSILLLLILPQILAGNTLFAPCLRLMVW----SLEKITGKKDCRYIL 304


>tr|A3A3N7|A3A3N7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_005409 PE=4 SV=1
Length = 364

Score = 45.4 bits (106), Expect = 0.002
Identities = 28/108 (25%), Positives = 49/108 (45%)
Frame = +1

Query: 154 LRLVESPHTHMLQRPIMKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQ 333
L LV S H I+KR + +++ FS+F +S+ GNC + ++ENM+ Q
Sbjct: 121 LNLVPSAHK------ILKRKGIGIIV--------FSVFTAISSVGNCGFTPVNENMIIFQ 166

Query: 334 RSCVXXXXXXXXXXXXXXXYAPILRFCMWVFSPFFETVSAFGNCEYVL 477
++ + +AP LR +W E ++ +C Y+L
Sbjct: 167 KNSILLLLILPQILAGNTLFAPCLRLMVW----SLEKITGKKDCRYIL 210


>tr|Q94KC8|Q94KC8_MESCR Putative potassium-sodium transporter
OS=Mesembryanthemum crystallinum PE=2 SV=1
Length = 505

Score = 45.1 bits (105), Expect = 0.003
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +1

Query: 202 MKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXXXXX 381
+ RS VL + H+ LFS+FVTVS F NC ++ +ENM+ + +
Sbjct: 185 ISRSASNVLERKHIEMHLFSLFVTVSTFSNCGFIPTNENMMVFKGNSGLLLILIPQILLG 244

Query: 382 XXXYAPILRFCMWV 423
Y LR +WV
Sbjct: 245 NKLYPSCLRLVLWV 258


>tr|Q01KD6|Q01KD6_ORYSA OSIGBa0113I13.11 protein OS=Oryza sativa
GN=OSIGBa0113I13.11 PE=4 SV=1
Length = 552

Score = 45.1 bits (105), Expect = 0.003
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +1

Query: 223 VLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXXXXXXXXYAPI 402
VL + F IF VS+F NC + L+ NM P +++ V ++P+
Sbjct: 251 VLKSKEISMYTFCIFTAVSSFANCGFTPLNSNMQPFRKNWVLLLLVIPQILAGNTLFSPL 310

Query: 403 LRFCMWV 423
LR C+WV
Sbjct: 311 LRLCVWV 317


>tr|B6QTE2|B6QTE2_PENMA Putative uncharacterized protein
OS=Penicillium marneffei ATCC 18224 GN=PMAA_003710 PE=4
SV=1
Length = 692

Score = 42.0 bits (97), Expect = 0.025
Identities = 26/85 (30%), Positives = 34/85 (40%)
Frame = +1

Query: 202 MKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXXXXX 381
M R+ + QN ++P IF +SAF N LLD N+VP Q S
Sbjct: 320 MARNHGDLSRQNRLNPWWIGIFFAISAFNNSGMSLLDANVVPFQNSRFFLITVGLLILAG 379

Query: 382 XXXYAPILRFCMWVFSPFFETVSAF 456
Y LR+C+ V F F
Sbjct: 380 NTCYPIFLRWCLVVIKKFTPNTDYF 404


>tr|A7QLF2|A7QLF2_VITVI Chromosome chr11 scaffold_118, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001583001
PE=4 SV=1
Length = 544

Score = 41.6 bits (96), Expect = 0.033
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1

Query: 193 RPIMKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXX 372
R ++K L +L FS+F VS F NC ++ +ENMV +++
Sbjct: 233 REVLKNKGLRILT--------FSVFTVVSTFSNCGFIPTNENMVVFKKNSGLLLILIPQI 284

Query: 373 XXXXXXYAPILRFCMWV 423
+AP LRF +WV
Sbjct: 285 LLGNTLFAPCLRFVIWV 301


>tr|A5AN75|A5AN75_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008802 PE=4 SV=1
Length = 498

Score = 41.6 bits (96), Expect = 0.033
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1

Query: 193 RPIMKRSRLPVLMQNHVHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXX 372
R ++K L +L FS+F VS F NC ++ +ENMV +++
Sbjct: 233 REVLKNKGLRILT--------FSVFTVVSTFSNCGFIPTNENMVVFKKNSGLLLILIPQI 284

Query: 373 XXXXXXYAPILRFCMWV 423
+AP LRF +WV
Sbjct: 285 LLGNTLFAPCLRFVIWV 301


>tr|A9SBR9|A9SBR9_PHYPA Na+ transporter OS=Physcomitrella patens
subsp. patens GN=hkt1 PE=4 SV=1
Length = 706

Score = 41.2 bits (95), Expect = 0.043
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1

Query: 241 VHPGLFSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXXXXXXXXYAPILRFCMW 420
++P L +IF+++SAF N LDEN VP S + + PILRF +W
Sbjct: 366 INPTLAAIFMSISAFSNTGSSPLDENFVPFATSSLVLVSLTVLFLGGNTLFPPILRFIIW 425


>tr|Q0JAB3|Q0JAB3_ORYSJ Os04g0607600 protein OS=Oryza sativa subsp.
japonica GN=Os04g0607600 PE=2 SV=1
Length = 500

Score = 40.8 bits (94), Expect = 0.056
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1

Query: 256 FSIFVTVSAFGNCEYVLLDENMVPLQRSCVXXXXXXXXXXXXXXXYAPILRFCMW 420
F++F TVS F NC ++ +ENMV +R +AP+L C+W
Sbjct: 201 FAVFTTVSTFSNCGFMPTNENMVVFKRDAPLQLLLVPQVLAGNTLFAPLLAACVW 255