BP918729 |
Clone id |
YMU001_000116_G12 |
Library |
YMU01 |
Length |
547 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_G12. |
Accession |
BP918729 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TCCAAATGTGCAAAAATTTCAAAAGTGTACATCGAAGTAGAGAGAATACAGGCCAAAGGC AGCTCAAAATTTGTAATCTGTCGCCTGAAAACCTTAATTGCGTCTGCTTGCATTGCTTTT TACTCGGACAGAATATCTTTACCTGCATGAGAGCAATTGGTACTCCAACTCATGATTCCA TCCGAATTGAGCTCACAATTTTCGCATGGACACAAAAGCTAAAAAGATAAATTTCGCTTC TATCCATTCCAAACGCACTTGATGGCGTTAACTGTTGCCACAGGGCTGGCTCCTTTGTGA GATTACAAACAACTAATTTCGGGTTTCTCTTTGCATACAAGTAGAGGAGGTCACCTGAAC TGACAATTTGAAAATTAAGAGGACCTTTCCCTTTCGCACAGAAATCCTTCATTATGCCAT ACGGCATTCTAGCAATCTCAATCATCTCCTTGCCGGGCTCCTGAAGCTCCCATATCCTGA CACTCCTAAAAGTATCTCCTCCATGATACATACCCACTAAAAGAAGCTTGTCTTTGTGCT CCACGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39090 |
Definition |
sp|Q39090|UFO_ARATH Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana |
Align length |
102 |
Score (bit) |
42.4 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDY4 |
Definition |
tr|A9SDY4|A9SDY4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
73 |
Score (bit) |
69.7 |
E-value |
9.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918729|Adiantum capillus-veneris mRNA, clone: YMU001_000116_G12. (547 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SDY4|A9SDY4_PHYPA Predicted protein (Fragment) OS=Physcomit... 70 9e-11 tr|Q6QVX5|Q6QVX5_SYRVU Fimbriata (Fragment) OS=Syringa vulgaris ... 51 3e-05 tr|B8LMU8|B8LMU8_PICSI Putative uncharacterized protein OS=Picea... 51 3e-05 tr|Q84UE8|Q84UE8_LOTJA Proliferating floral organs protein (UFO-... 50 1e-04 tr|A9TDG5|A9TDG5_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04 tr|Q84JN4|Q84JN4_PEA Stp-h2 (Stp-h3) OS=Pisum sativum PE=4 SV=1 49 2e-04 tr|A9TXI0|A9TXI0_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04 tr|A9U4F8|A9U4F8_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04 tr|Q5BMD2|Q5BMD2_MEDTR Stamina pistilloidia (Fragment) OS=Medica... 47 5e-04 tr|Q84L18|Q84L18_PEA Stp-h4 OS=Pisum sativum PE=4 SV=1 47 7e-04 tr|A9RPC5|A9RPC5_PHYPA Predicted protein OS=Physcomitrella paten... 47 7e-04 tr|A9TZQ0|A9TZQ0_PHYPA Predicted protein OS=Physcomitrella paten... 47 9e-04 tr|Q9ZTZ0|Q9ZTZ0_PEA Stamina pistilloidia OS=Pisum sativum GN=St... 46 0.001 tr|A9RIS8|A9RIS8_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002 tr|Q6QVX4|Q6QVX4_9LAMI Fimbriata (Fragment) OS=Chelone glabra GN... 43 0.009 tr|Q6QVX3|Q6QVX3_VEROI Fimbriata (Fragment) OS=Verbena officinal... 43 0.012 tr|Q6QVX0|Q6QVX0_PAUTO Fimbriata (Fragment) OS=Paulownia tomento... 43 0.012 tr|A7P2M5|A7P2M5_VITVI Chromosome chr1 scaffold_5, whole genome ... 43 0.012 tr|A5BDR7|A5BDR7_VITVI Putative uncharacterized protein OS=Vitis... 43 0.012 tr|B6CNU4|B6CNU4_PETHY DOUBLE TOP OS=Petunia hybrida GN=DOT PE=2... 42 0.016 tr|A9SK59|A9SK59_PHYPA Predicted protein (Fragment) OS=Physcomit... 42 0.021 tr|Q2WBM6|Q2WBM6_9LAMI Fimbriata protein OS=Misopates orontium G... 42 0.028 tr|B6E0Z1|B6E0Z1_CAPAN ANANTHA OS=Capsicum annuum GN=AN PE=2 SV=1 42 0.028 tr|A7PZQ6|A7PZQ6_VITVI Chromosome chr15 scaffold_40, whole genom... 41 0.047 tr|A9TB91|A9TB91_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.062 tr|A9T141|A9T141_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.080 tr|Q41223|Q41223_ANTMA Fim protein OS=Antirrhinum majus GN=fim P... 39 0.14 tr|B6E0Z0|B6E0Z0_SOLLC ANANTHA (Fragment) OS=Solanum lycopersicu... 39 0.14 tr|B6CNU5|B6CNU5_SOLLC DOUBLE TOP OS=Solanum lycopersicum GN=DOT... 39 0.14 tr|B6D6T5|B6D6T5_SOLPI F-box DOT OS=Solanum pimpinellifolium PE=... 39 0.18
>tr|A9SDY4|A9SDY4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_44304 PE=4 SV=1 Length = 300
Score = 69.7 bits (169), Expect = 9e-11 Identities = 35/73 (47%), Positives = 46/73 (63%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGGDTFRSVRIWELQEPGKEMIEIARMPYGIMKDFCAKGKGPLNFQ 368 LVEH +LLL+G TF VRIWELQE + +E+ MP + K+F KG+ +FQ Sbjct: 228 LVEHFGRLLLIGAVRIDQTFEGVRIWELQESTAKWVEVETMPERLFKEFYRKGRMFYSFQ 287
Query: 367 IVSSGDLLYLYAK 329 V SG+LLYL+ K Sbjct: 288 CVGSGNLLYLHVK 300
>tr|Q6QVX5|Q6QVX5_SYRVU Fimbriata (Fragment) OS=Syringa vulgaris GN=FIM PE=2 SV=1 Length = 331
Score = 51.2 bits (121), Expect = 3e-05 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGG--DTFRSVRIWELQEPGKEMIEIARMPYGIMKDFCAKGKGPLN 374 LVE + KL+L+ +T +S+R+W LQE G +EI RMP + F ++ +G Sbjct: 191 LVESRGKLILIAAVEKSKLNTPKSLRLWALQECGTMWVEIERMPQQLYIQF-SEVEGGQG 249
Query: 373 FQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQLTPSSAFGM 245 F V+ G+ + + +++ K ++ N +++ LW P + G+ Sbjct: 250 FNCVAHGEFVVILIQKSEKALLFNFSRKKWLWIPTCPYNVNGV 292
>tr|B8LMU8|B8LMU8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 416
Score = 51.2 bits (121), Expect = 3e-05 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGGDTFRS-----------VRIWELQEPGKEMIEIARMPYGIMKDF 401 LVE + +LL++G D + IWEL KE +EI R+P I +DF Sbjct: 288 LVECRGRLLMIGRLSNMDQISPAADQTESNIPRIIIWELDVRHKEWVEIVRVPTEICRDF 347
Query: 400 CAKGKGPLNFQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQLTPSSAFGMDRSEIYLF 221 + F G+ +Y+ RNP ++V +L K WQ L PS F R + +L Sbjct: 348 SVPLEIYAPFVCSGLGNHIYITTHRNPNVLVYDLWKN--TWQWL-PSDPFFPRRRDFHLL 404
Query: 220 SFCVHAKI 197 F + ++ Sbjct: 405 GFALEPRL 412
>tr|Q84UE8|Q84UE8_LOTJA Proliferating floral organs protein (UFO-like protein) OS=Lotus japonicus GN=Pfo PE=2 SV=1 Length = 449
Score = 49.7 bits (117), Expect = 1e-04 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGG--DTFRSVRIWELQEPGKEMIEIARMPYGIMKDFCAKGKGPLN 374 LVE ++KL+LV + RS+R+W LQ G +E RMP + F A+ +G Sbjct: 316 LVECREKLMLVAAVEKSKLNVPRSLRVWTLQACGTMWVESERMPQQLYIQF-AEIEGGNG 374
Query: 373 FQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQLTPSSAFGMDRSEIYLFSF 215 F+ V G+ + + K K ++ +L ++ WQ + P G D E++ F++ Sbjct: 375 FECVGHGEFVVIMIKGTDKALLYDLVRK--RWQWIPPCPYAGYDGFELHGFAY 425
>tr|A9TDG5|A9TDG5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_91322 PE=4 SV=1 Length = 393
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGGDTF--RSVRIWELQEPGKEMIEIARMPYGIMKDFCAKGKGPLN 374 +VE +++LL+VG + F + +WELQ P ++ + + MP G+ +D L+ Sbjct: 276 VVECQERLLMVGGFGRRPHFVTEGICVWELQPPTRDWVVVQNMPEGLFRDL-LNNSSLLS 334
Query: 373 FQIVSSGDLLYLYAKRNPKLVV 308 F V GD ++L ++ P+L+V Sbjct: 335 FNCVGHGDRIFLSNRKTPRLIV 356
>tr|Q84JN4|Q84JN4_PEA Stp-h2 (Stp-h3) OS=Pisum sativum PE=4 SV=1 Length = 441
Score = 48.9 bits (115), Expect = 2e-04 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGG--DTFRSVRIWELQEPGKEMIEIARMPYGIMKDFCAKGKGPLN 374 LVE K KLLLV + +S+R+W LQ G +E RMP + F G Sbjct: 310 LVECKGKLLLVAAVEKSKLNVPKSLRVWSLQGCGSVWVETERMPQQLYVQFADMENGN-G 368
Query: 373 FQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQLTPSSAFGMDRSEIYLFSF 215 F+ V +G+ + + K + K +V ++ ++ WQ + P G D E++ F++ Sbjct: 369 FECVGNGEFIVIMIKGSDKGLVYDIGRK--RWQWIPPCPYAGYDGFELHGFAY 419
>tr|A9TXI0|A9TXI0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172546 PE=4 SV=1 Length = 861
Score = 48.9 bits (115), Expect = 2e-04 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 5/107 (4%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGGDTF---RSVRIWELQEP--GKEMIEIARMPYGIMKDFCAKGKG 383 LVE + LL+VG F +++R+WEL+E G E IE+ MP ++++FC + Sbjct: 623 LVECQGSLLIVGRISEDSHFAKPKAIRLWELKEKETGGEWIEVVTMPPALLEEFCKEWTR 682
Query: 382 PLNFQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQLTPSSAFGMD 242 P +F+ G ++Y + R ++ +L+++ +WQ L + D Sbjct: 683 PTHFRCRGLGSVIYFLSSR---ALMYDLSQK--VWQWLPSGPGYHYD 724
>tr|A9U4F8|A9U4F8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_101961 PE=4 SV=1 Length = 395
Score = 48.5 bits (114), Expect = 2e-04 Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 3/96 (3%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGGDTFRSVRIWELQE---PGKEMIEIARMPYGIMKDFCAKGKGPL 377 L++ +++L LVG V +WEL++ GK+ +E+ +MP+ + F K + Sbjct: 274 LIQRRNRLFLVGGAGTERICEHVHMWELKQVDGEGKQWVEVEKMPHEYFQIFF-KERTAT 332
Query: 376 NFQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQL 269 + + GDL+Y Y + +++VC+ +K+ W+ L Sbjct: 333 DLKCSGHGDLVYFYKDSHTQVLVCDFSKKQTEWRWL 368
>tr|Q5BMD2|Q5BMD2_MEDTR Stamina pistilloidia (Fragment) OS=Medicago truncatula GN=Stp PE=2 SV=1 Length = 422
Score = 47.4 bits (111), Expect = 5e-04 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGG--DTFRSVRIWELQEPGKEMIEIARMPYGIMKDFCAKGKGPLN 374 LVE K KLLLV + +S+R+W LQ G +E RMP + F G Sbjct: 313 LVECKGKLLLVAAVEKSKLNVPKSLRVWCLQGCGSVWVESERMPQQLYVQFAEMENGN-G 371
Query: 373 FQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQLTPSSAFGMDRSEIYLFSF 215 F+ V +G+ + + K + K +V ++ ++ WQ + P G D E++ F++ Sbjct: 372 FECVGNGEFIVIMIKGSDKGLVYDIGRK--RWQWIPPCPYAGYDGFELHGFAY 422
>tr|Q84L18|Q84L18_PEA Stp-h4 OS=Pisum sativum PE=4 SV=1 Length = 443
Score = 47.0 bits (110), Expect = 7e-04 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Frame = -1
Query: 547 LVEHKDKLLLVGMYHGG--DTFRSVRIWELQEPGKEMIEIARMPYGIMKDFCAKGKGPLN 374 LVE KLLLV + +S+R+W LQ G +E RMP + F G Sbjct: 312 LVECNGKLLLVAAVEKSKLNVPKSLRVWSLQGCGSVWVETERMPQQLYVQFADMENGN-G 370
Query: 373 FQIVSSGDLLYLYAKRNPKLVVCNLTKEPALWQQLTPSSAFGMDRSEIYLFSF 215 F+ V +G+ + + K + K +V ++ ++ WQ + P G D E++ F++ Sbjct: 371 FECVGNGEFIVIMIKGSDKGLVYDIGRK--RWQWIPPCPYAGYDGFELHGFAY 421
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