BP918646 |
Clone id |
YMU001_000115_H04 |
Library |
YMU01 |
Length |
535 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000115_H04. |
Accession |
BP918646 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGGCGGGGATCAATCAATCATTACTAATCCAGATTCCCATTCTCTCTCATTGGCCATTG AACACGCCAGCATCGTTCTCTACCTAGACGGCGTGCAAGCTCCTCTGCAAGAGCTTGACC AGGATCATCTCCATCAGTAGCAATGATTATACGAGACACCTTCTCAAAGTATTCCTTGCA ATTCCAAATGTATGAGTATTTGTTGTCCTCAGCTCCGCTGATGGACCTCTTTGCTGCAGA AATTTTGGCTGGTGCACCATCTGGAACACTGATGCAATTCAGAAACCCTGCCTCTTCCAT TGCCAGCTTATCCATTTCGCCCTCAACAATAATAATTTCCTTTGCATTAGTAATATCATC AAGCCCATAAAAAACTTTTAAAGACTGCTTTTCCTGCCAAAACATTTTTCCGAGTGTCCG ATACTTGAAGTTGACTACTTCTCCATTCAGTAGGTAAGGAAAAACAATCACAGCTCCATG AGTCTTACTGAATGTCTCTTTGACCTGATTGCGAGCTACAGTTTTCCTGCTTATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PM37 |
Definition |
sp|Q9PM37|PRIM_CAMJE DNA primase OS=Campylobacter jejuni |
Align length |
42 |
Score (bit) |
36.2 |
E-value |
0.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8GUI8 |
Definition |
tr|Q8GUI8|Q8GUI8_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana |
Align length |
165 |
Score (bit) |
178.0 |
E-value |
1.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918646|Adiantum capillus-veneris mRNA, clone: YMU001_000115_H04. (535 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8GUI8|Q8GUI8_ARATH Putative uncharacterized protein OS=Arabi... 178 1e-43 tr|B5X582|B5X582_ARATH At1g30680 OS=Arabidopsis thaliana PE=2 SV=1 178 1e-43 tr|A7Q4T1|A7Q4T1_VITVI Chromosome chr10 scaffold_50, whole genom... 177 3e-43 tr|A7QBZ7|A7QBZ7_VITVI Chromosome chr10 scaffold_76, whole genom... 177 4e-43 tr|A7Q4U1|A7Q4U1_VITVI Chromosome chr10 scaffold_50, whole genom... 176 5e-43 tr|A9T2J2|A9T2J2_PHYPA Predicted protein OS=Physcomitrella paten... 176 7e-43 tr|A7NVK9|A7NVK9_VITVI Chromosome chr18 scaffold_1, whole genome... 168 2e-40 tr|B8B177|B8B177_ORYSI Putative uncharacterized protein OS=Oryza... 160 5e-38 tr|A4RZ84|A4RZ84_OSTLU Predicted protein OS=Ostreococcus lucimar... 156 7e-37 tr|Q016M7|Q016M7_OSTTA Toprim domain-containing protein (ISS) OS... 149 9e-35 tr|Q9SA83|Q9SA83_ARATH T5I8.13 OS=Arabidopsis thaliana GN=T5I8.1... 139 9e-32 tr|Q9SA81|Q9SA81_ARATH T5I8.11 OS=Arabidopsis thaliana GN=T5I8.1... 132 1e-29 tr|Q652I8|Q652I8_ORYSJ Putative uncharacterized protein OSJNBa00... 127 4e-28 tr|A5C8V8|A5C8V8_VITVI Putative uncharacterized protein OS=Vitis... 114 4e-24 tr|A3BEJ3|A3BEJ3_ORYSJ Putative uncharacterized protein OS=Oryza... 91 4e-17 tr|Q3JF01|Q3JF01_NITOC Toprim domain-containing protein OS=Nitro... 87 7e-16 tr|B6C2G5|B6C2G5_9GAMM Putative uncharacterized protein OS=Nitro... 87 7e-16 tr|Q1MC96|Q1MC96_RHIL3 Putative phage DNA primase/helicase OS=Rh... 80 5e-14 tr|Q1QI69|Q1QI69_NITHX Toprim domain-containing protein OS=Nitro... 74 4e-12 tr|A3WZX6|A3WZX6_9BRAD Toprim domain-containing protein OS=Nitro... 74 4e-12 tr|B3JH16|B3JH16_9BACE Putative uncharacterized protein OS=Bacte... 67 4e-10 tr|A7M1M1|A7M1M1_BACOV Putative uncharacterized protein OS=Bacte... 62 2e-08 tr|A7V2Q4|A7V2Q4_BACUN Putative uncharacterized protein OS=Bacte... 61 3e-08 tr|A8JHD3|A8JHD3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 59 2e-07 tr|Q8A8J5|Q8A8J5_BACTN DNA primase/helicase OS=Bacteroides theta... 57 6e-07 tr|B3C8G6|B3C8G6_9BACE Putative uncharacterized protein OS=Bacte... 57 8e-07 tr|B6WK58|B6WK58_9BACE Putative uncharacterized protein OS=Bacte... 55 2e-06 tr|B6VUE3|B6VUE3_9BACE Putative uncharacterized protein OS=Bacte... 54 5e-06 tr|A6L757|A6L757_BACV8 DNA primase/helicase OS=Bacteroides vulga... 54 7e-06 tr|B0NQ00|B0NQ00_BACSE Putative uncharacterized protein OS=Bacte... 47 5e-04
>tr|Q8GUI8|Q8GUI8_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 709
Score = 178 bits (452), Expect = 1e-43 Identities = 91/165 (55%), Positives = 116/165 (70%), Gaps = 2/165 (1%) Frame = -2
Query: 534 ISRKTVARNQVKETFSKTHG--AVIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGL 361 ISRKT+ RN+V + K G VI F Y GE+V+ KYR+L KMF+QE+++ ++ YGL Sbjct: 217 ISRKTLERNRVMQ---KRIGDEIVIAFTYWQRGELVSCKYRSLTKMFFQERKTRRILYGL 273
Query: 360 DDITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWN 181 DDI E+IIVEGE+DKLAMEEAGFLNC+SVPDGAPAK+S +K S +D KY ++WN Sbjct: 274 DDIEKTSEVIIVEGEIDKLAMEEAGFLNCVSVPDGAPAKVS-SKEIPSEDKDTKYKFLWN 332
Query: 180 CKEYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWPMR 46 C +Y +K SRI+IATDGD PGQ RCWRV+WP + Sbjct: 333 CNDYLKKASRIVIATDGDGPGQAMAEEIARRLGKERCWRVKWPKK 377
>tr|B5X582|B5X582_ARATH At1g30680 OS=Arabidopsis thaliana PE=2 SV=1 Length = 709
Score = 178 bits (452), Expect = 1e-43 Identities = 91/165 (55%), Positives = 116/165 (70%), Gaps = 2/165 (1%) Frame = -2
Query: 534 ISRKTVARNQVKETFSKTHG--AVIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGL 361 ISRKT+ RN+V + K G VI F Y GE+V+ KYR+L KMF+QE+++ ++ YGL Sbjct: 217 ISRKTLERNRVMQ---KRIGDEIVIAFTYWQRGELVSCKYRSLTKMFFQERKTRRILYGL 273
Query: 360 DDITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWN 181 DDI E+IIVEGE+DKLAMEEAGFLNC+SVPDGAPAK+S +K S +D KY ++WN Sbjct: 274 DDIEKTSEVIIVEGEIDKLAMEEAGFLNCVSVPDGAPAKVS-SKEIPSEDKDTKYKFLWN 332
Query: 180 CKEYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWPMR 46 C +Y +K SRI+IATDGD PGQ RCWRV+WP + Sbjct: 333 CNDYLKKASRIVIATDGDGPGQAMAEEIARRLGKERCWRVKWPKK 377
>tr|A7Q4T1|A7Q4T1_VITVI Chromosome chr10 scaffold_50, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029829001 PE=4 SV=1 Length = 583
Score = 177 bits (449), Expect = 3e-43 Identities = 91/165 (55%), Positives = 112/165 (67%), Gaps = 2/165 (1%) Frame = -2
Query: 534 ISRKTVARNQVKETFSKTHGA--VIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGL 361 IS KT+ARN V + K++G +I F Y NG +V+ KYR + K FWQEK + K+FYG+ Sbjct: 99 ISEKTLARNSVMQ---KSYGDQFIIAFTYRRNGVLVSCKYRDVNKNFWQEKDTEKIFYGV 155
Query: 360 DDITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWN 181 DDI A +IIIVEGE+DKL+MEEAGF NC+SVPDGAP +S K S +D KY Y+WN Sbjct: 156 DDIKEASDIIIVEGEIDKLSMEEAGFYNCVSVPDGAPPSVS-TKVFESAEKDIKYQYLWN 214
Query: 180 CKEYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWPMR 46 CKEY EK SRII+ATDGD PG RCWRV+WP + Sbjct: 215 CKEYLEKASRIILATDGDAPGLALAEELARRLGRERCWRVKWPKK 259
>tr|A7QBZ7|A7QBZ7_VITVI Chromosome chr10 scaffold_76, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035172001 PE=4 SV=1 Length = 334
Score = 177 bits (448), Expect = 4e-43 Identities = 90/167 (53%), Positives = 110/167 (65%) Frame = -2
Query: 534 ISRKTVARNQVKETFSKTHGAVIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGLDD 355 IS KT+ RN V + +VI Y NG +V KYR++GK FWQEK + K+ YGLDD Sbjct: 135 ISEKTLWRNAVMQLSGNQ--SVIALTYRQNGRLVGCKYRSMGKRFWQEKGTEKILYGLDD 192
Query: 354 ITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWNCK 175 I A EIIIVEGE+DKL++EEAGF NC+SVP GAP K+S AK S +D Y Y+WNCK Sbjct: 193 IQEANEIIIVEGEVDKLSVEEAGFCNCVSVPGGAPQKVS-AKELPSLDKDTAYHYLWNCK 251
Query: 174 EYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWPMRENGN 34 EY +K SRII+ATDGD PGQ RCWRV WP +E+ + Sbjct: 252 EYLDKASRIILATDGDSPGQALAEELARRLGKERCWRVSWPKKEDSS 298
>tr|A7Q4U1|A7Q4U1_VITVI Chromosome chr10 scaffold_50, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029843001 PE=4 SV=1 Length = 407
Score = 176 bits (447), Expect = 5e-43 Identities = 91/165 (55%), Positives = 112/165 (67%), Gaps = 2/165 (1%) Frame = -2
Query: 534 ISRKTVARNQVKETFSKTHGA--VIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGL 361 IS KT+ARN V + KT+G +I F Y NG +V+ KYR + K FWQEK + K+FYG+ Sbjct: 138 ISEKTLARNSVMQ---KTYGDQFIIAFTYRRNGVLVSCKYRDVNKNFWQEKDTEKIFYGV 194
Query: 360 DDITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWN 181 DDI A +IIIVEGE+DKL+MEEAGF NC+SVPDGAP +S K S +D KY Y+WN Sbjct: 195 DDIKEASDIIIVEGEIDKLSMEEAGFYNCVSVPDGAPPSVS-TKVFESEEKDIKYQYLWN 253
Query: 180 CKEYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWPMR 46 CKEY EK SRII+ATDGD PG RCW+V+WP + Sbjct: 254 CKEYLEKASRIILATDGDAPGLALAEELARRLGRERCWQVKWPKK 298
>tr|A9T2J2|A9T2J2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191010 PE=4 SV=1 Length = 630
Score = 176 bits (446), Expect = 7e-43 Identities = 84/166 (50%), Positives = 111/166 (66%) Frame = -2
Query: 534 ISRKTVARNQVKETFSKTHGAVIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGLDD 355 +S +TV +N V + ++ T I FPY+ +GE++N K+R K FWQ K + KV YGLD Sbjct: 150 LSEETVRQNNVAQHWANTTDLAIAFPYVQDGEILNCKFRDGNKRFWQVKNAPKVLYGLDH 209
Query: 354 ITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWNCK 175 I +++EI+IVEGE DKLAM EAG +NC+SVPDGAPAK+S + ED KY Y+WNCK Sbjct: 210 IKDSREIVIVEGEFDKLAMYEAGIVNCVSVPDGAPAKVSGDELPPPN-EDKKYEYLWNCK 268
Query: 174 EYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWPMRENG 37 +YF+ +RII+ATD D+PGQ RCWRV WP E+G Sbjct: 269 DYFKNATRIILATDADEPGQALAEELARRLGRERCWRVTWPEDESG 314
>tr|A7NVK9|A7NVK9_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015472001 PE=4 SV=1 Length = 501
Score = 168 bits (425), Expect = 2e-40 Identities = 81/142 (57%), Positives = 98/142 (69%) Frame = -2
Query: 471 VIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGLDDITNAKEIIIVEGEMDKLAMEE 292 +I F Y NG V+ KYR + K FWQE+ + K+FYG+DDI A +IIIVEGE+DKL+MEE Sbjct: 150 IIAFTYRRNGVFVSCKYRDVNKNFWQEEDTEKIFYGVDDIKAASDIIIVEGEIDKLSMEE 209
Query: 291 AGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWNCKEYFEKVSRIIIATDGDDPGQX 112 AGF NC+SVP+GAPA +S K S ED KY Y+WNCKEY EK SRII+ATDGD PG Sbjct: 210 AGFYNCVSVPNGAPASVS-TKVFKSDEEDTKYQYLWNCKEYLEKASRIILATDGDSPGLA 268
Query: 111 XXXXXXXXXXXXRCWRVQWPMR 46 RCWRV+WP + Sbjct: 269 LAEELARRLGRERCWRVKWPKK 290
>tr|B8B177|B8B177_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24073 PE=4 SV=1 Length = 698
Score = 160 bits (404), Expect = 5e-38 Identities = 81/168 (48%), Positives = 107/168 (63%) Frame = -2
Query: 534 ISRKTVARNQVKETFSKTHGAVIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGLDD 355 IS +T+ RN V + + ++ VI F Y +G +V KYR + K F QE + K+ YGLDD Sbjct: 212 ISPETLRRNSVMQR-NWSNKIVIAFTYRRDGVLVGCKYREVSKKFSQEANTEKILYGLDD 270
Query: 354 ITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWNCK 175 I A++IIIVEGE+DKL+MEEAG+ NC+SVPDGAP K+S+ + +D KY Y+WNCK Sbjct: 271 IKRARDIIIVEGEIDKLSMEEAGYRNCVSVPDGAPPKVSS--KLPDKDQDKKYQYLWNCK 328
Query: 174 EYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWPMRENGNL 31 EY + SRII+ATD D PGQ RCWRV WP + + Sbjct: 329 EYLDPASRIILATDADPPGQALAEELARRLGKERCWRVNWPKKNENEI 376
>tr|A4RZ84|A4RZ84_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_94562 PE=4 SV=1 Length = 592
Score = 156 bits (394), Expect = 7e-37 Identities = 77/166 (46%), Positives = 101/166 (60%), Gaps = 5/166 (3%) Frame = -2
Query: 534 ISRKTVARN-----QVKETFSKTHGAVIVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVF 370 IS +T RN V + + + FPY+ +GE++N KYR K FWQ K + K+ Sbjct: 114 ISLETAERNGLAVQSVYSPIASGYVDALCFPYMRDGELINIKYRGPDKTFWQVKGAEKIL 173
Query: 369 YGLDDITNAKEIIIVEGEMDKLAMEEAGFLNCISVPDGAPAKISAAKRSISGAEDNKYSY 190 YGLDD+T +E+I+VEGEMDKLA+EEAGF N +SVPDGAP K+ + + ED KY Y Sbjct: 174 YGLDDVTGEEEVILVEGEMDKLALEEAGFKNVVSVPDGAPGKVKDGP-TPAPEEDKKYEY 232
Query: 189 IWNCKEYFEKVSRIIIATDGDDPGQXXXXXXXXXXXXXRCWRVQWP 52 +WNC+ + +SR +IATD D PGQ RCWRV WP Sbjct: 233 LWNCRAQLDTISRFVIATDSDGPGQALSEELARRLGKERCWRVTWP 278
>tr|Q016M7|Q016M7_OSTTA Toprim domain-containing protein (ISS) OS=Ostreococcus tauri GN=Ot06g03730 PE=4 SV=1 Length = 699
Score = 149 bits (376), Expect = 9e-35 Identities = 69/139 (49%), Positives = 89/139 (64%) Frame = -2
Query: 468 IVFPYLLNGEVVNFKYRTLGKMFWQEKQSLKVFYGLDDITNAKEIIIVEGEMDKLAMEEA 289 + FPY+ +GE++N KYR K FWQ K + K+ YGLDD+ +E+IIVEGEMDKLA+E A Sbjct: 247 LCFPYMRDGELINIKYRGPDKSFWQVKGAEKILYGLDDVAGEEEVIIVEGEMDKLALEMA 306
Query: 288 GFLNCISVPDGAPAKISAAKRSISGAEDNKYSYIWNCKEYFEKVSRIIIATDGDDPGQXX 109 GF N +SVPDGAP K+ S +D KY Y+WNC+ + +SR +IATD D PG+ Sbjct: 307 GFRNVVSVPDGAPGKVKDGALP-SPEDDRKYEYLWNCRAQLDTISRFVIATDSDGPGRAL 365
Query: 108 XXXXXXXXXXXRCWRVQWP 52 RCWRV WP Sbjct: 366 SEELARRLGKERCWRVTWP 384
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