BP918638
Clone id YMU001_000115_G08
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATAGAATATTACCTGCAGGTCTCAGAGCAGATTCTGAGGGAGACAGATATACGTGTTGCT
TAGGATTTTCGTAAAGCCTTTTGACACAGTCCCTAGGGCAAGGCTTATTGCAGAGGGTGT
ATGACTTGGTGAAATTGTTTGGGGGATCACTGCATTGTATGAGATGATGATTGGCAGAGT
AAGAACTTCTGAGGGTCAATTTACACCAGTTTATTCCACCATAGGGGGGAGACAGGCATG
TCTGTCATCACTCTCTTTGGTTTATATATTTATGAGCTTGTAGGCTATATTGGCAAACGA
GGAGACAGAGGAGAGCAGTTGAGCAGCATATAGATCCTTCTTGATTGTATGAAGATGATA
TTGTACTGATAGTTGACTCTCTAGAGGCGTACAGAGGCATCTTGATTTGCTACATGCTAC
TCACAGGATTGTGGTAAGTTGGTTAATCTTAGTAAAACCAAGGTCATGGTGTTCAATGTT
CAATACTACCCCCCCATT
■■Homology search results ■■ -
sp_hit_id P53602
Definition sp|P53602|ERG19_HUMAN Diphosphomevalonate decarboxylase OS=Homo sapiens
Align length 47
Score (bit) 32.0
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918638|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_G08.
(498 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P53602|ERG19_HUMAN Diphosphomevalonate decarboxylase OS=Homo ... 32 1.6
sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic OS=Pisum sa... 31 3.7
sp|Q6BQK1|TSC10_DEBHA 3-ketodihydrosphingosine reductase TSC10 O... 30 6.1

>sp|P53602|ERG19_HUMAN Diphosphomevalonate decarboxylase OS=Homo
sapiens GN=MVD PE=1 SV=1
Length = 400

Score = 32.0 bits (71), Expect = 1.6
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1

Query: 387 PLESQLSVQYHLHTIKKDLYAAQLLSSVSSFANIAYKLINI*TKESD 247
PL S LS + H+ ++ AA L SS + +A +AY L + ESD
Sbjct: 101 PLPSSLSCKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVESD 147


>sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic OS=Pisum
sativum GN=PGMP PE=2 SV=1
Length = 626

Score = 30.8 bits (68), Expect = 3.7
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1

Query: 282 YKLINI*TKESDDRHACLPPMVE*TGVN*PS-EVLTLPIIISYNAVIPQTISPSHTPSAI 106
Y+L N +H+ +P + + N PS +V P + YN+ I T S S TP+ I
Sbjct: 5 YRLDNFIISAFKPKHSNVPLSIHHSSSNFPSFKVQNFPFRVRYNSAIRATSSSSSTPTTI 64

Query: 105 S 103
+
Sbjct: 65 A 65


>sp|Q6BQK1|TSC10_DEBHA 3-ketodihydrosphingosine reductase TSC10
OS=Debaryomyces hansenii GN=TSC10 PE=3 SV=2
Length = 328

Score = 30.0 bits (66), Expect = 6.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3

Query: 160 IQCSDPPNNFTKSYTLCNKPCPRDCVK 80
IQ S P NN T SY C+ DCVK
Sbjct: 56 IQSSSPENNATLSYKCCDASNYEDCVK 82


tr_hit_id A0CVH0
Definition tr|A0CVH0|A0CVH0_PARTE Chromosome undetermined scaffold_29, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 60
Score (bit) 34.7
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918638|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_G08.
(498 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0CVH0|A0CVH0_PARTE Chromosome undetermined scaffold_29, whol... 35 2.6
tr|B6FY90|B6FY90_9CLOT Putative uncharacterized protein OS=Clost... 34 3.3
tr|O24518|O24518_HELAN Unconventional myosin OS=Helianthus annuu... 33 7.5
tr|O24516|O24516_HELAN Unconventional myosin (Fragment) OS=Helia... 33 7.5
tr|Q9LNP7|Q9LNP7_ARATH F1L3.28 OS=Arabidopsis thaliana PE=4 SV=1 33 9.8
tr|Q39160|Q39160_ARATH Myosin OS=Arabidopsis thaliana GN=At1g175... 33 9.8

>tr|A0CVH0|A0CVH0_PARTE Chromosome undetermined scaffold_29, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00010955001 PE=4 SV=1
Length = 388

Score = 34.7 bits (78), Expect = 2.6
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -3

Query: 202 KLTLRSSYSANHHLIQCSDPPNNFTKSYTLCNKPCPRDCVKRLYENPKQHVYLSPSESAL 23
KL +S+ H + S P N TKS L P ++ +KRL P L SE ++
Sbjct: 43 KLFRSTSFKTEQHALLLSTPKNRSTKSPMLLKPPIEKNALKRLPSKPNPFDTLGKSEKSI 102


>tr|B6FY90|B6FY90_9CLOT Putative uncharacterized protein
OS=Clostridium hiranonis DSM 13275 GN=CLOHIR_00841 PE=4
SV=1
Length = 121

Score = 34.3 bits (77), Expect = 3.3
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1

Query: 199 IYTSLFHHRGETGMSVITLFGLYIYELVGYIGKRG 303
++ S F+H G G S++T++G+Y+ LVGY+G G
Sbjct: 28 LFGSAFNHLG-IGDSILTIWGVYLIILVGYLGTSG 61


>tr|O24518|O24518_HELAN Unconventional myosin OS=Helianthus annuus
GN=hamy5 PE=2 SV=1
Length = 1528

Score = 33.1 bits (74), Expect = 7.5
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3

Query: 193 LRSSYSANHHLIQCSDPPNNFTKSYTLCNKPCPRDCVKRLYENPKQHVYLSPSES 29
+R+ + Q SDP N+ Y LC P P D K E+P+ + YL+ S+S
Sbjct: 234 IRTYLLERSRVCQISDPERNYHCFYLLCAAP-PEDREKFKLESPQSYHYLNQSKS 287


>tr|O24516|O24516_HELAN Unconventional myosin (Fragment)
OS=Helianthus annuus GN=hamy2 PE=2 SV=1
Length = 1260

Score = 33.1 bits (74), Expect = 7.5
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3

Query: 193 LRSSYSANHHLIQCSDPPNNFTKSYTLCNKPCPRDCVKRLYENPKQHVYLSPSES 29
+R+ + Q SDP N+ Y LC P P D K E+P+ + YL+ S+S
Sbjct: 234 IRTYLLERSRVCQISDPERNYHCFYLLCAAP-PEDREKFKLESPQSYHYLNQSKS 287


>tr|Q9LNP7|Q9LNP7_ARATH F1L3.28 OS=Arabidopsis thaliana PE=4 SV=1
Length = 1599

Score = 32.7 bits (73), Expect = 9.8
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3

Query: 193 LRSSYSANHHLIQCSDPPNNFTKSYTLCNKPCPRDCVKRLYENPKQHVYLSPS 35
+R+ + Q SDP N+ Y LC P P D K ENP + YL+ S
Sbjct: 259 IRTYLLERSRVCQISDPERNYHCFYLLCAAP-PEDIKKYKLENPHKFHYLNQS 310


>tr|Q39160|Q39160_ARATH Myosin OS=Arabidopsis thaliana GN=At1g17580
PE=2 SV=1
Length = 1520

Score = 32.7 bits (73), Expect = 9.8
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3

Query: 193 LRSSYSANHHLIQCSDPPNNFTKSYTLCNKPCPRDCVKRLYENPKQHVYLSPS 35
+R+ + Q SDP N+ Y LC P P D K ENP + YL+ S
Sbjct: 231 IRTYLLERSRVCQISDPERNYHCFYLLCAAP-PEDIKKYKLENPHKFHYLNQS 282