BP918605
Clone id YMU001_000115_D10
Library
Length 448
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGAGAGAGGCCGCCGAAGGCGGCCGGCCGTACTAGTTAAATATATGAATATAGGGCTCC
CATTGTTTAGAGACTGAATTTGTGAAGCTACAAGATTTCTGACAACTTCGTTGACCCATT
TTACTGGGGGCAATCTCATCTCAATAAATACACCCCAGTAAATCCCTCTTCCTCTCTGCA
ACCTTGCAAGGAGTAAACACCCAACCACAATTGGGATTCGGTGTATTCTGTGTCTCCTCT
CCCCTTCAGCAATCCTGAAGAGAAAAATCTAGAATTGGACCATGAGCTGTAGTCCAAAAT
AATGAGAGCAGAGTTACATAATTGTACAGCTCATGTAGCCCTAGGAGTGGACAACCTCTT
ATTCTCTGGCAGAATCCTAATTCAAAGACTGCAAGGATGCTTAGTACTTGTAAACATGGC
CCGTGGTTAATTGAACCATTCCCAATCA
■■Homology search results ■■ -
sp_hit_id Q7VBN8
Definition sp|Q7VBN8|MEND_PROMA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase OS=Prochlorococcus marinus
Align length 43
Score (bit) 31.2
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918605|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_D10.
(448 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7VBN8|MEND_PROMA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cycloh... 31 2.1
sp|P36757|VL2_HPV32 Minor capsid protein L2 OS=Human papillomavi... 30 4.7
sp|Q9C073|F117A_HUMAN Protein FAM117A OS=Homo sapiens GN=FAM117A... 30 4.7
sp|Q7KW14|CCDCX_DROME Coiled-coil domain-containing protein CG32... 30 6.0

>sp|Q7VBN8|MEND_PROMA
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
carboxylate synthase OS=Prochlorococcus marinus GN=menD
PE=3 SV=1
Length = 574

Score = 31.2 bits (69), Expect = 2.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -3

Query: 386 FELGFCQRIRGCPLLGLHEL--YNYVTLLSLFWTTAH---GPI 273
F + C+ + CP +GLHE+ ++ TL+ W AH GP+
Sbjct: 114 FLVPVCREVFNCPSIGLHEISGRSFFTLVKKTWEKAHAYPGPV 156


>sp|P36757|VL2_HPV32 Minor capsid protein L2 OS=Human papillomavirus
type 32 GN=L2 PE=3 SV=1
Length = 476

Score = 30.0 bits (66), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1

Query: 328 SSCSPRSGQPLILWQNPNSKTARMLSTCKHGPWLIEPFPI 447
SS S S P +L +P + T R+ ST H P +PF +
Sbjct: 133 SSASGPSSTPAVLDISPPTNTIRVASTTSHNPVYSDPFTL 172


>sp|Q9C073|F117A_HUMAN Protein FAM117A OS=Homo sapiens GN=FAM117A
PE=2 SV=1
Length = 453

Score = 30.0 bits (66), Expect = 4.7
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2

Query: 104 NFVDPFYWGQSHLNKYTPVNPSSSLQPCKE*TPNHNWDSVYSVSPLPF 247
N + P + G + + P NP S L P P SPLPF
Sbjct: 385 NLMKPLFPGMGFIFRNCPSNPGSPLPPASPRPPPRKDPEASKASPLPF 432


>sp|Q7KW14|CCDCX_DROME Coiled-coil domain-containing protein CG32809
OS=Drosophila melanogaster GN=CG32809 PE=1 SV=1
Length = 1234

Score = 29.6 bits (65), Expect = 6.0
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -3

Query: 149 IY*DEIAPSKMGQRSCQKSCSFTNSVS 69
+Y E AP K+G+ SCQKS SF SVS
Sbjct: 469 LYIREKAP-KLGKNSCQKSVSFEKSVS 494


tr_hit_id A7ILK3
Definition tr|A7ILK3|A7ILK3_XANP2 Putative uncharacterized protein OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)
Align length 26
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918605|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_D10.
(448 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7ILK3|A7ILK3_XANP2 Putative uncharacterized protein OS=Xanth... 33 7.0

>tr|A7ILK3|A7ILK3_XANP2 Putative uncharacterized protein
OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 /
Py2) GN=Xaut_3668 PE=4 SV=1
Length = 150

Score = 33.1 bits (74), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3

Query: 180 NLARSKHPTTIGIRCILCLLSPSAIL 257
N R+ HP G+ CILC+L P+A++
Sbjct: 100 NFIRAPHPPFHGVECILCVLEPNALV 125