BP918529 |
Clone id |
YMU001_000114_E12 |
Library |
YMU01 |
Length |
549 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_E12. |
Accession |
BP918529 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCACTGGGTTTCTCCCGTGGTAGAGAGCTTCCTACGGATAAGTTGTACAAGGAGAGGAGG AAGGTCCTCCACTCGCTTCCCAAAACAGCGAGGGCAGTAGCCGAACCACTCTTCTCTAGG ACATGGGAATCTTCTTACCACTTCTTCTTCTGGATTGTCGAAGTGGATTGGTAGCACTCG CATGCGTCGTGCAAATCGATAGGCAACCTTCCGCCGCTTAGCTTCGGATGGCTTCTTCTT TGACAAAGTGGGTACAGCCCGGCTTTCTGAGCTTGAAGCACTTGCTTGGCCAGATGCTTC TCCCTTTGGGGTCATGTGTTTCTAGACTGGCTTATCTTCTCCTTGCCTTTGGCTCGAGCA GCCCCTTTAGGACACTTTGGAGTTATATCTGTGTCTGCAGCTTCTTTAGGGAAAAGAGGT CTCACCGTTTGCTTCCCTTCCTTGACGTGAATGATTTCTTCGCGATGAATGTCAATGTAG ATGACTTCAGCCCTTTCGCTGCCTTCGTTGTTGCTGGCACTCATTGACAGTGTGCCTTGG TTGACAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7VS43 |
Definition |
sp|Q7VS43|GPMA_BORPE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bordetella pertussis |
Align length |
81 |
Score (bit) |
30.8 |
E-value |
4.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q944U0 |
Definition |
tr|Q944U0|Q944U0_ORYSA Ethylene receptor-like protein 1 OS=Oryza sativa |
Align length |
27 |
Score (bit) |
34.7 |
E-value |
3.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918529|Adiantum capillus-veneris mRNA, clone: YMU001_000114_E12. (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q944U0|Q944U0_ORYSA Ethylene receptor-like protein 1 OS=Oryza... 35 3.4 tr|Q8H1X1|Q8H1X1_ORYSI Putative ethylene receptor OS=Oryza sativ... 35 3.4 tr|Q7XX84|Q7XX84_ORYSJ cDNA clone:J023048C17, full insert sequen... 35 3.4 tr|Q5H9Y0|Q5H9Y0_ORYSA P0650D04.3 protein OS=Oryza sativa GN=P06... 35 3.4 tr|Q0JF30|Q0JF30_ORYSJ Os04g0169100 protein (Fragment) OS=Oryza ... 35 3.4 tr|A3C585|A3C585_ORYSJ Putative uncharacterized protein OS=Oryza... 35 3.4 tr|A2XQB6|A2XQB6_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.4 tr|A0L9Z9|A0L9Z9_MAGSM HAD-superfamily hydrolase, subfamily IIB ... 34 4.4 tr|B6PQ37|B6PQ37_BRAFL Putative uncharacterized protein OS=Branc... 34 4.5 tr|B6PMG3|B6PMG3_BRAFL Putative uncharacterized protein OS=Branc... 34 4.5 tr|Q5DMW3|Q5DMW3_CUCME MRGH10 OS=Cucumis melo GN=MRGH10 PE=4 SV=1 34 5.8 tr|A4QVE1|A4QVE1_MAGGR Predicted protein OS=Magnaporthe grisea G... 34 5.9 tr|A1U316|A1U316_MARAV Phage integrase family protein OS=Marinob... 33 7.7 tr|B0W124|B0W124_CULQU Cationic amino acid transporter OS=Culex ... 33 9.8 tr|Q6C6D7|Q6C6D7_YARLI YALI0E10329p OS=Yarrowia lipolytica GN=YA... 33 9.8 tr|Q2UKB0|Q2UKB0_ASPOR Histone acetyltransferases PCAF/SAGA/ADA ... 33 9.8 tr|B8N3N1|B8N3N1_ASPFL Transcriptional regulator Ngg1, putative ... 33 9.8
>tr|Q944U0|Q944U0_ORYSA Ethylene receptor-like protein 1 OS=Oryza sativa PE=2 SV=2 Length = 763
Score = 34.7 bits (78), Expect = 3.4 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1
Query: 301 SLWGHVFLDWLIFSLPLARAAPLGHFG 381 SLW VF WL+ SLP A AA H G Sbjct: 6 SLWIRVFFSWLLLSLPAAAAADFSHCG 32
>tr|Q8H1X1|Q8H1X1_ORYSI Putative ethylene receptor OS=Oryza sativa subsp. indica GN=ETR2 PE=2 SV=2 Length = 763
Score = 34.7 bits (78), Expect = 3.4 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1
Query: 301 SLWGHVFLDWLIFSLPLARAAPLGHFG 381 SLW VF WL+ SLP A AA H G Sbjct: 6 SLWIRVFFSWLLLSLPAAAAADFSHCG 32
>tr|Q7XX84|Q7XX84_ORYSJ cDNA clone:J023048C17, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0089K06.20 PE=2 SV=1 Length = 763
Score = 34.7 bits (78), Expect = 3.4 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1
Query: 301 SLWGHVFLDWLIFSLPLARAAPLGHFG 381 SLW VF WL+ SLP A AA H G Sbjct: 6 SLWIRVFFSWLLLSLPAAAAADFSHCG 32
>tr|Q5H9Y0|Q5H9Y0_ORYSA P0650D04.3 protein OS=Oryza sativa GN=P0650D04.3 PE=4 SV=1 Length = 763
Score = 34.7 bits (78), Expect = 3.4 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1
Query: 301 SLWGHVFLDWLIFSLPLARAAPLGHFG 381 SLW VF WL+ SLP A AA H G Sbjct: 6 SLWIRVFFSWLLLSLPAAAAADFSHCG 32
>tr|Q0JF30|Q0JF30_ORYSJ Os04g0169100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0169100 PE=4 SV=1 Length = 813
Score = 34.7 bits (78), Expect = 3.4 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1
Query: 301 SLWGHVFLDWLIFSLPLARAAPLGHFG 381 SLW VF WL+ SLP A AA H G Sbjct: 56 SLWIRVFFSWLLLSLPAAAAADFSHCG 82
>tr|A3C585|A3C585_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030457 PE=4 SV=1 Length = 764
Score = 34.7 bits (78), Expect = 3.4 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1
Query: 301 SLWGHVFLDWLIFSLPLARAAPLGHFG 381 SLW VF WL+ SLP A AA H G Sbjct: 6 SLWIRVFFSWLLLSLPAAAAADFSHCG 32
>tr|A2XQB6|A2XQB6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14827 PE=4 SV=1 Length = 722
Score = 34.7 bits (78), Expect = 3.4 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1
Query: 301 SLWGHVFLDWLIFSLPLARAAPLGHFG 381 SLW VF WL+ SLP A AA H G Sbjct: 6 SLWIRVFFSWLLLSLPAAAAADFSHCG 32
>tr|A0L9Z9|A0L9Z9_MAGSM HAD-superfamily hydrolase, subfamily IIB OS=Magnetococcus sp. (strain MC-1) GN=Mmc1_2291 PE=4 SV=1 Length = 264
Score = 34.3 bits (77), Expect = 4.4 Identities = 35/131 (26%), Positives = 55/131 (41%) Frame = -2
Query: 425 VRPLFPKEAADTDITPKCPKGAARAKGKEKISQSRNT*PQREKHLAKQVLQAQKAGLYPL 246 +R P D +TP+C +R K QS + P +K + + + GL P+ Sbjct: 103 LRHQIPLLLRDLPLTPRCVDRQSRFK------QSYSVAPDLDKQPLMEQISVRLKGL-PI 155
Query: 245 CQRRSHPKLSGGRLPIDLHDACECYQSTSTIQKKKW*EDSHVLEKSGSATALAVLGSEWR 66 QR S + SG RL + + +Q+ +DSH L SA L+V S Sbjct: 156 EQRWSRDEESGTRLLNIIPSGINKLTAIRMLQQHCAIDDSHTLFAGDSANDLSVFASSVP 215
Query: 65 TFLLSLYNLSV 33 + L+ + SV Sbjct: 216 SILVGNADKSV 226
>tr|B6PQ37|B6PQ37_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_109623 PE=4 SV=1 Length = 333
Score = 34.3 bits (77), Expect = 4.5 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1
Query: 252 PTLSKKKPSEAKRRKVAYRFAR--RMRVLPIHFDNPEEEVVRRFPCPREEWFGYCPRC 85 P L KK P KR + A R R+R++P D E R P ++ G CP C Sbjct: 265 PELCKKAPGRGKRERCAVCLHRKSRVRLVPCGHDRLCERCATRIMDPDYQYSGICPLC 322
>tr|B6PMG3|B6PMG3_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_108719 PE=4 SV=1 Length = 313
Score = 34.3 bits (77), Expect = 4.5 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1
Query: 252 PTLSKKKPSEAKRRKVAYRFAR--RMRVLPIHFDNPEEEVVRRFPCPREEWFGYCPRC 85 P L KK P KR + A R R+R++P D E R P ++ G CP C Sbjct: 245 PELCKKAPGRGKRERCAVCLHRKSRVRLVPCGHDRLCERCATRIMDPDYQYSGICPLC 302
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