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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918513
Clone id YMU001_000114_D06
Library
Length 554
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAGTACCTGCCTGGAAGAATTCGCGGCCGGAGGAATTTTTTTTTTTTTTTTCACCAATCC
TGCAAGTTCACGCTATCAAAGATCCACAATGAGGCTAAGTCGGTAACCTCAGCAGCACAG
GATATAACAGAGGGGACATCAGAATGGCAAAATCTTTGACATTAGAGCCCTAGCTATTCA
CCACAAAGGCCTCGACAAAAATCTACAAGCTCCCTGATGTATTGATCAGATAGTTCTTAG
CCTTAAATGTAGTGTGAGTGCTTGTAGTTAGTCCTACAAACCGATAGTGACAAACCTCCA
AATTCTCCCTTCATCGGATCAATTGTTAGGAGATTGCCTTCACTACCCCTTTCAAACCTT
TTTCAAACTCCCAATCACCATCCACTACAGACCTAATCCAATTTGTTCAGCCTTCCTTTA
CTACGTGACATCCACACCAGCCATCCCCAAACAATGCACGGTTGAGGTTGCCAGAGACCG
TTTGAACCCACACAGCAAAGAGAGCTATGCCTCATTATAATGTTGAATGCCTCGCTCCAA
GTGCTACTGATCAC
■■Homology search results ■■ -
sp_hit_id Q9VQU9
Definition sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster
Align length 50
Score (bit) 32.7
E-value 0.98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918513|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_D06.
         (503 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster G...    33   0.98 
sp|Q5NCP0|RNF43_MOUSE RING finger protein 43 OS=Mus musculus GN=...    30   4.9  
sp|Q6NXD8|DEN5B_DANRE DENN domain-containing protein 5B OS=Danio...    30   6.4  
sp|Q8PZJ7|ACKA_METMA Acetate kinase OS=Methanosarcina mazei GN=a...    30   6.4  
sp|Q28Q14|RL27_JANSC 50S ribosomal protein L27 OS=Jannaschia sp....    30   8.3  
sp|P05769|POLG_MVEV5 Genome polyprotein OS=Murray valley encepha...    30   8.3  

>sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster
           GN=bowl PE=1 SV=1
          Length = 744

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
 Frame = +1

Query: 217 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 333
           ++ Q +S KPPN P          F+GSI  R   LP   L    P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673


>sp|Q5NCP0|RNF43_MOUSE RING finger protein 43 OS=Mus musculus
           GN=Rnf43 PE=2 SV=1
          Length = 784

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
 Frame = +3

Query: 312 SNSQSPSTTDLIQFVQPSFTT*HPH--------QPSPNNARLRLPETV*THTAKRAMPHY 467
           S S  P+ + L+   + S T  HPH        +P P +    LP  +  HTA    PHY
Sbjct: 630 SPSPKPNPSGLLNLQKSSLTVRHPHRKRRGGPSEPLPTS----LPPDLTVHTACPVFPHY 685

Query: 468 NVECLAP 488
           +     P
Sbjct: 686 SPRLAYP 692


>sp|Q6NXD8|DEN5B_DANRE DENN domain-containing protein 5B OS=Danio
           rerio GN=dennd5b PE=2 SV=2
          Length = 1311

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +2

Query: 296 PFQTFFKLPITIHYRPNPICSAFLYYVTSTPAIPKQCTVEVARDRLNPH 442
           P +  FK  +  HY  N  C+ F     +   +PK  +    RD L PH
Sbjct: 64  PLKRTFKSKVLAHYPENIECNPFDQDAVNMLCMPKGLSFRTQRDSLAPH 112


>sp|Q8PZJ7|ACKA_METMA Acetate kinase OS=Methanosarcina mazei GN=ackA
           PE=3 SV=2
          Length = 408

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 244 PPNSPFIGSIVRRLPSLPLSNLFQTPNHHPLQT*SNLFSLP 366
           PPN   I S    +P +P+  +F T  HH +   + +++LP
Sbjct: 125 PPNMMGISSCQEIMPGVPMVAVFDTAFHHTIPPYAYMYALP 165


>sp|Q28Q14|RL27_JANSC 50S ribosomal protein L27 OS=Jannaschia sp.
           (strain CCS1) GN=rpmA PE=3 SV=1
          Length = 89

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 427 VSGNLNRALFGDGWCGCHVVKEG*TNWIRSVVDGDWEFEKGLKG 296
           ++GN+     G+ W     V EG  + I +V DG   F+KG KG
Sbjct: 32  IAGNIIARQRGNKWWPGEGVGEGKDHTIYAVADGHVSFKKGFKG 75


>sp|P05769|POLG_MVEV5 Genome polyprotein OS=Murray valley encephalitis
            virus (strain MVE-1-51) PE=1 SV=2
          Length = 3434

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = -2

Query: 460  GIALFAVWVQTVSGNLNRA---LFGDGWCGCHVVKEG*TNWIRSVVDGDWEFEKGLKGVV 290
            GI     W++    N +     + G    G H V    + WI S ++G W+ E+ + G V
Sbjct: 954  GITSTRGWLKLREENTSECDSTIIGTAVKGNHAVHSDLSYWIESGLNGTWKLERAIFGEV 1013

Query: 289  KA 284
            K+
Sbjct: 1014 KS 1015
tr_hit_id B4L9X7
Definition tr|B4L9X7|B4L9X7_DROMO GI14159 OS=Drosophila mojavensis
Align length 42
Score (bit) 33.9
E-value 4.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918513|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_D06.
         (503 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4L9X7|B4L9X7_DROMO GI14159 OS=Drosophila mojavensis GN=GI141...    34   4.5  
tr|Q5AQD8|Q5AQD8_EMENI Putative uncharacterized protein OS=Emeri...    34   4.5  
tr|P79045|P79045_EMENI DNA binding regulatory protein AmdX OS=Em...    34   4.5  
tr|B4I337|B4I337_DROSE GM18436 OS=Drosophila sechellia GN=GM1843...    33   7.6  
tr|B4Q9Q4|B4Q9Q4_DROSI GD23254 OS=Drosophila simulans GN=GD23254...    33   9.9  
tr|B3N378|B3N378_DROER GG24967 OS=Drosophila erecta GN=GG24967 P...    33   9.9  
tr|A4V047|A4V047_DROME Brother of odd with entrails limited, iso...    33   9.9  

>tr|B4L9X7|B4L9X7_DROMO GI14159 OS=Drosophila mojavensis GN=GI14159
           PE=4 SV=1
          Length = 1021

 Score = 33.9 bits (76), Expect = 4.5
 Identities = 20/42 (47%), Positives = 23/42 (54%)
 Frame = +1

Query: 241 KPPNSPFIGSIVRRLPSLPLSNLFQTPNHHPLQT*SNLFSLP 366
           +PP SP+     R   SLPLSNL  TP   PL     LF+LP
Sbjct: 324 RPPLSPY-----RLRSSLPLSNLIDTPPSSPLTPVGVLFNLP 360


>tr|Q5AQD8|Q5AQD8_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN9492.2 PE=4 SV=1
          Length = 1150

 Score = 33.9 bits (76), Expect = 4.5
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +3

Query: 267 INC*EIAFTTPFKPFSNSQSPSTTDLIQFVQPSFTT*HPHQPSPNNARLRLPETV*THTA 446
           I C ++   +   P S +Q PST D+ +F+    T  HPH P  +   L       T+  
Sbjct: 488 IQCRDLYSRSSSSPTSTNQLPSTADMQRFISAYITYFHPHLPFLHIPSLNFQAPEYTNNL 547

Query: 447 KRAMPHYNV 473
           +    H N+
Sbjct: 548 RTPSGHLNL 556


>tr|P79045|P79045_EMENI DNA binding regulatory protein AmdX
           OS=Emericella nidulans GN=amdX PE=4 SV=1
          Length = 1150

 Score = 33.9 bits (76), Expect = 4.5
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +3

Query: 267 INC*EIAFTTPFKPFSNSQSPSTTDLIQFVQPSFTT*HPHQPSPNNARLRLPETV*THTA 446
           I C ++   +   P S +Q PST D+ +F+    T  HPH P  +   L       T+  
Sbjct: 487 IQCRDLYSRSSSSPTSTNQLPSTADMQRFISAYITYFHPHLPFLHIPSLNFQAPEYTNNL 546

Query: 447 KRAMPHYNV 473
           +    H N+
Sbjct: 547 RTPSGHLNL 555


>tr|B4I337|B4I337_DROSE GM18436 OS=Drosophila sechellia GN=GM18436
           PE=4 SV=1
          Length = 226

 Score = 33.1 bits (74), Expect = 7.6
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
 Frame = +1

Query: 217 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 333
           ++ Q +S KPPN P          F+GSI  R   LP  +L    P+HHP
Sbjct: 106 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPSLDLMDPHHHP 155


>tr|B4Q9Q4|B4Q9Q4_DROSI GD23254 OS=Drosophila simulans GN=GD23254
           PE=4 SV=1
          Length = 1439

 Score = 32.7 bits (73), Expect = 9.9
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
 Frame = +1

Query: 217 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 333
           ++ Q +S KPPN P          F+GSI  R   LP   L    P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673


>tr|B3N378|B3N378_DROER GG24967 OS=Drosophila erecta GN=GG24967 PE=4
           SV=1
          Length = 744

 Score = 32.7 bits (73), Expect = 9.9
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
 Frame = +1

Query: 217 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 333
           ++ Q +S KPPN P          F+GSI  R   LP   L    P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673


>tr|A4V047|A4V047_DROME Brother of odd with entrails limited,
           isoform B OS=Drosophila melanogaster GN=bowl PE=4 SV=1
          Length = 744

 Score = 32.7 bits (73), Expect = 9.9
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
 Frame = +1

Query: 217 LVLQTDSDKPPNSP----------FIGSIVRRLPSLPLSNL-FQTPNHHP 333
           ++ Q +S KPPN P          F+GSI  R   LP   L    P+HHP
Sbjct: 624 IITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHHHP 673