BP918499
Clone id YMU001_000114_C01
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CACCAACATCCTTCTTACATTGGCATCAATGGATTCCAAGCTTTGTGTGCACAAGTGTCA
GTTAGTGTTGTATGCCCCACTTGCGCACACACACTCTAGCATCCAGAAGGCAGTATCTCC
TGCCAAATGGTTAAACTAATCATTCTTGCAATGTGAGCAGAGTAGCTTAGACAACACCTT
CTGTGACACCCAGCGAGATCGAAGCAAAGCCAAATTAAGCTATCATGCGTTTTTCTTGTC
TTGCATTGTGAGAGTCCACAATCTCTACATCGGTGTGTGAGATTATAGCCTCAAAAGCTT
CCACCAAAATCTTGACTTTGGCCTCCCCTGTAGGGGCTAACTTATGCACAACCCCCTCGA
TTGCATGATTGAGCATCCACTCTTCAGCTTGTTTTCTCTCGAGCATCTGCTGCTTCCTCA
ATATGACCGTCTCCGGACTCACCTCTTCAGTCCCTCTTAAAACCCTTCTCCTCCTTTGCC
TCCTTGTGGTATTACTGCTCATGGTACCATCACT
■■Homology search results ■■ -
sp_hit_id Q99088
Definition sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis
Align length 32
Score (bit) 30.0
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918499|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_C01.
(514 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xeno... 30 6.5

>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus
laevis GN=ldlr-B PE=2 SV=1
Length = 892

Score = 30.0 bits (66), Expect = 6.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3

Query: 206 CFDLAGCHRRCCLSYSAHIARMISLTIWQEIL 111
C D+ G +RR LS H+A LTI+++++
Sbjct: 585 CIDITGENRRTVLSDETHLAHPFGLTIFEDLV 616


tr_hit_id A7PVQ7
Definition tr|A7PVQ7|A7PVQ7_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera
Align length 57
Score (bit) 61.2
E-value 3.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918499|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_C01.
(514 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PVQ7|A7PVQ7_VITVI Chromosome chr8 scaffold_34, whole genome... 61 3e-08
tr|A2Y441|A2Y441_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07
tr|Q8GSM6|Q8GSM6_LOTJA Putative uncharacterized protein OS=Lotus... 58 2e-07
tr|Q6L4D0|Q6L4D0_ORYSJ Os05g0381700 protein OS=Oryza sativa subs... 58 2e-07
tr|B0BL98|B0BL98_LOTJA CM0216.530.nc protein OS=Lotus japonicus ... 58 2e-07
tr|A3B3J0|A3B3J0_ORYSJ Putative uncharacterized protein OS=Oryza... 58 2e-07
tr|Q8W235|Q8W235_SOLTU PNCBP OS=Solanum tuberosum PE=2 SV=1 57 5e-07
tr|Q9LZA8|Q9LZA8_ARATH Putative uncharacterized protein F8F6_230... 56 1e-06
tr|Q8H6X1|Q8H6X1_ARATH Pathogen-induced calmodulin-binding prote... 56 1e-06
tr|Q8H6W8|Q8H6W8_PHAVU Pathogen-induced calmodulin-binding prote... 55 2e-06
tr|Q9M1H1|Q9M1H1_ARATH Putative uncharacterized protein T14E10_1... 55 2e-06
tr|Q70I33|Q70I33_LOTJA Putative uncharacterized protein OS=Lotus... 55 2e-06
tr|A7PKM3|A7PKM3_VITVI Chromosome chr7 scaffold_20, whole genome... 54 5e-06
tr|Q5JKX4|Q5JKX4_ORYSJ cDNA clone:002-124-B08, full insert seque... 52 1e-05
tr|A3A1J4|A3A1J4_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|A2WZ40|A2WZ40_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|Q9SII1|Q9SII1_ARATH Putative uncharacterized protein At2g3880... 52 2e-05
tr|A9SC64|A9SC64_PHYPA Predicted protein OS=Physcomitrella paten... 50 7e-05
tr|A5B762|A5B762_VITVI Putative uncharacterized protein OS=Vitis... 46 0.001
tr|Q84ZT8|Q84ZT8_TOBAC Calcium/calmodulin protein kinase 1 (Calc... 45 0.003
tr|B6SKL2|B6SKL2_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.006
tr|A7PN25|A7PN25_VITVI Chromosome chr14 scaffold_21, whole genom... 44 0.006
tr|Q9SDA2|Q9SDA2_ARATH Putative uncharacterized protein F13G24.2... 40 0.068
tr|Q9LF39|Q9LF39_ARATH Putative uncharacterized protein T20K14_4... 39 0.20
tr|Q2QQ54|Q2QQ54_ORYSJ Os12g0506500 protein OS=Oryza sativa subs... 39 0.20
tr|B8BPU3|B8BPU3_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.20
tr|A3CHP8|A3CHP8_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.20
tr|Q9FLZ6|Q9FLZ6_ARATH Emb|CAB62594.1 OS=Arabidopsis thaliana GN... 37 0.58
tr|Q9FLK7|Q9FLK7_ARATH Emb|CAB62594.1 OS=Arabidopsis thaliana GN... 37 0.75
tr|Q2QN57|Q2QN57_ORYSJ Expressed protein (Putative uncharacteriz... 36 0.98

>tr|A7PVQ7|A7PVQ7_VITVI Chromosome chr8 scaffold_34, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025320001
PE=4 SV=1
Length = 876

Score = 61.2 bits (147), Expect = 3e-08
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -1

Query: 433 ETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHTDVE 263
E + LR Q+M RK AEEWML++A++ VV KL P KV +LVEAFEAI D+E
Sbjct: 545 EKIYLRHQEMEGRKSAEEWMLDYALQQVVSKLTPARRRKVALLVEAFEAISPLQDIE 601



Score = 60.1 bits (144), Expect = 6e-08
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = -1

Query: 433 ETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHTDVEIVD 254
E + LR Q +RK +EEWML++A++ VV KL+P +V++LVEAFE + + +E
Sbjct: 803 EKICLRHQTTEDRKNSEEWMLDYALQQVVTKLSPARRRRVELLVEAFETVTPPSQIEAQK 862

Query: 253 SHNA 242
HNA
Sbjct: 863 RHNA 866


>tr|A2Y441|A2Y441_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_19770 PE=4 SV=1
Length = 1020

Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = -1

Query: 445 EVSPET--VILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHT 272
E+ PE+ V L+ Q M ERK AEEWM+++A+ V+ L P + KV++LV+AFE ++ H
Sbjct: 944 ELDPESEKVDLKHQMMDERKNAEEWMIDYALRRAVNNLGPARKKKVELLVQAFETVLPHD 1003

Query: 271 DVEIVD 254
+ E D
Sbjct: 1004 EEEKKD 1009


>tr|Q8GSM6|Q8GSM6_LOTJA Putative uncharacterized protein OS=Lotus
japonicus PE=4 SV=1
Length = 734

Score = 58.2 bits (139), Expect = 2e-07
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -1

Query: 436 PETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIIS 278
PE V L+ Q + ERK A+EWML+ A+ V KL P G+ KV +LVEAFE ++S
Sbjct: 658 PEKVDLKHQMIDERKHADEWMLDFALRQAVTKLVPAGKMKVALLVEAFETVMS 710


>tr|Q6L4D0|Q6L4D0_ORYSJ Os05g0381700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0088M05.10 PE=4 SV=1
Length = 643

Score = 58.2 bits (139), Expect = 2e-07
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = -1

Query: 445 EVSPET--VILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHT 272
E+ PE+ V L+ Q M ERK AEEWM+++A+ V+ L P + KV++LV+AFE ++ H
Sbjct: 567 ELDPESEKVDLKHQMMDERKNAEEWMIDYALRRAVNNLGPARKKKVELLVQAFETVLPHD 626

Query: 271 DVE 263
+ E
Sbjct: 627 EEE 629


>tr|B0BL98|B0BL98_LOTJA CM0216.530.nc protein OS=Lotus japonicus
GN=CM0216.530.nc PE=4 SV=1
Length = 728

Score = 58.2 bits (139), Expect = 2e-07
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -1

Query: 436 PETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIIS 278
PE V L+ Q + ERK A+EWML+ A+ V KL P G+ KV +LVEAFE ++S
Sbjct: 652 PEKVDLKHQMIDERKHADEWMLDFALRQAVTKLVPAGKMKVALLVEAFETVMS 704


>tr|A3B3J0|A3B3J0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_017612 PE=4 SV=1
Length = 1080

Score = 58.2 bits (139), Expect = 2e-07
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = -1

Query: 445 EVSPET--VILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHT 272
E+ PE+ V L+ Q M ERK AEEWM+++A+ V+ L P + KV++LV+AFE ++ H
Sbjct: 1004 ELDPESEKVDLKHQMMDERKNAEEWMIDYALRRAVNNLGPARKKKVELLVQAFETVLPHD 1063

Query: 271 DVE 263
+ E
Sbjct: 1064 EEE 1066


>tr|Q8W235|Q8W235_SOLTU PNCBP OS=Solanum tuberosum PE=2 SV=1
Length = 1309

Score = 57.0 bits (136), Expect = 5e-07
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = -1

Query: 451 TEEVSPETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHT 272
T + PE V LR Q ERK+AE+WML++A++ +V L P + +V +LVEAFEA++
Sbjct: 1248 TPDQEPEKVDLRHQMTDERKKAEKWMLDYAMQHIVTTLTPARKKRVAMLVEAFEAVVPLP 1307

Query: 271 DV 266
+V
Sbjct: 1308 EV 1309



Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -1

Query: 433 ETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAII 281
E V LR Q ERK+ EEWML++A++ + +LAPT + KV++L++AFE ++
Sbjct: 789 EKVNLRTQTADERKRGEEWMLDYALQQAISQLAPTQQRKVELLIKAFETVV 839


>tr|Q9LZA8|Q9LZA8_ARATH Putative uncharacterized protein F8F6_230
OS=Arabidopsis thaliana GN=F8F6_230 PE=4 SV=1
Length = 1495

Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/52 (53%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = -1

Query: 433 ETVI-LRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAII 281
ET++ LR++ + ERK AEEWML+HA+ V+ LAP+ + KVK LV+AFE++I
Sbjct: 547 ETIMRLRRELVGERKNAEEWMLDHALRQVISTLAPSQKKKVKHLVKAFESLI 598



Score = 55.8 bits (133), Expect = 1e-06
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = -1

Query: 445 EVSPETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAI 284
EV E V LR Q+ +K +EWM+++A++GVV KL P + KV++LV+AFE++
Sbjct: 1437 EVEAEKVNLRHQETQNKKNGDEWMVDNALQGVVSKLTPARKLKVQLLVQAFESL 1490



Score = 45.8 bits (107), Expect = 0.001
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -1

Query: 445 EVSPET--VILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAI 284
E PET + LR Q++ ++ +EEWML++A+ + LAP+ + KV +L +AF+ I
Sbjct: 1181 EPDPETEKIRLRHQEIGGKRNSEEWMLDYALRQAISTLAPSQKRKVSLLAQAFDTI 1236



Score = 42.0 bits (97), Expect = 0.018
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -1

Query: 433 ETVILRKQQMLE--RKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHTD 269
E V LR + ++E R + EE ML++A+ + +LAP KV +LV+AF+ ++ D
Sbjct: 893 ENVFLRHRSIMEGTRTEGEEMMLDYALRQAISRLAPIQRKKVDLLVQAFDIVLDGHD 949


>tr|Q8H6X1|Q8H6X1_ARATH Pathogen-induced calmodulin-binding protein
(Fragment) OS=Arabidopsis thaliana GN=PICBP PE=2 SV=1
Length = 1157

Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/52 (53%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = -1

Query: 433 ETVI-LRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAII 281
ET++ LR++ + ERK AEEWML+HA+ V+ LAP+ + KVK LV+AFE++I
Sbjct: 209 ETIMRLRRELVGERKNAEEWMLDHALRQVISTLAPSQKKKVKHLVKAFESLI 260



Score = 55.8 bits (133), Expect = 1e-06
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = -1

Query: 445 EVSPETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAI 284
EV E V LR Q+ +K +EWM+++A++GVV KL P + KV++LV+AFE++
Sbjct: 1099 EVEAEKVNLRHQETQNKKNGDEWMVDNALQGVVSKLTPARKLKVQLLVQAFESL 1152



Score = 45.8 bits (107), Expect = 0.001
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -1

Query: 445 EVSPET--VILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAI 284
E PET + LR Q++ ++ +EEWML++A+ + LAP+ + KV +L +AF+ I
Sbjct: 843 EPDPETEKIRLRHQEIGGKRNSEEWMLDYALRQAISTLAPSQKRKVSLLAQAFDTI 898



Score = 42.0 bits (97), Expect = 0.018
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -1

Query: 433 ETVILRKQQMLE--RKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAIISHTD 269
E V LR + ++E R + EE ML++A+ + +LAP KV +LV+AF+ ++ D
Sbjct: 555 ENVFLRHRSIMEGTRTEGEEMMLDYALRQAISRLAPIQRKKVDLLVQAFDIVLDGHD 611


>tr|Q8H6W8|Q8H6W8_PHAVU Pathogen-induced calmodulin-binding protein
(Fragment) OS=Phaseolus vulgaris GN=PICBP PE=2 SV=1
Length = 178

Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = -1

Query: 433 ETVILRKQQMLERKQAEEWMLNHAIEGVVHKLAPTGEAKVKILVEAFEAII 281
E V LR Q M ERK EEWML++A+ VV KL P + KV +LVEAFE ++
Sbjct: 123 EKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVGLLVEAFETVM 173