BP918416
Clone id YMU001_000113_C04
Library
Length 557
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACAGCCCAGAGCATGTTCATTACACCAAGTAAACACATCGGTTTCAAGGAAATGCTTCTC
TCTAATTGAGAGTTTAGTCACACTTGTGCTATGAGTAGTTACCAATGAGTTTTGATCATG
ATAATTGTTCTACTTCCTCATGTTTACATACAAGGACCAGTTTCAAGAAAATTGGTAGCC
TACAAGAAAATATTACCCAAGCTCCCTTCAAAGAAAGCCAAACCAAATGATGAGCATCAT
AGCATGCAAATAATCCTTATGTGAAAACATTTGAATGTTAATTTGCACTAGTTTCAAACT
AGTGATTGGTGAATGATCACCTACATCGTTGGAGGTGTTTAGTCAAAACAGTGAAAAGGC
ACAGCCCTCAAGAGAAGATCATGTCGACTCAACACCATACTTGTATACCATGACATAAGA
AATTTAGGCATGCCTCTGACCACGTTCCTTGTAATCACCTCCTTAAAATGTGAAACTGAA
TTCCTTCTATTCAAAGTATCAGCATAAATCAGTCCAGCATGCCAGTATTCCTTAAGACTC
CTTCTAATGTCCCGATC
■■Homology search results ■■ -
sp_hit_id Q9VVF3
Definition sp|Q9VVF3|OR74A_DROME Putative odorant receptor 74a OS=Drosophila melanogaster
Align length 37
Score (bit) 32.3
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918416|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_C04.
(557 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9VVF3|OR74A_DROME Putative odorant receptor 74a OS=Drosophil... 32 1.6
sp|Q5BU77|NU4LM_COLGU NADH-ubiquinone oxidoreductase chain 4L OS... 31 4.7

>sp|Q9VVF3|OR74A_DROME Putative odorant receptor 74a OS=Drosophila
melanogaster GN=Or74a PE=1 SV=1
Length = 404

Score = 32.3 bits (72), Expect = 1.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -2

Query: 232 HHLVWL--SLKGAWVIFSCRLPIFLKLVLVCKHEEVE 128
+H+ W + G W +F RL IFL ++ C+H EV+
Sbjct: 29 NHVAWPLEAESGRWTVFLDRLMIFLGFLVFCEHNEVD 65


>sp|Q5BU77|NU4LM_COLGU NADH-ubiquinone oxidoreductase chain 4L
OS=Colobus guereza GN=MT-ND4L PE=3 SV=1
Length = 98

Score = 30.8 bits (68), Expect = 4.7
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = -3

Query: 414 VMVYKYGVEST*SSLEGCAFSLF*LNTSNDVGDHSPITSLKLVQINIQMFSHKDYLHAMM 235
+++Y+ + S+ LEG SLF +NT + HSP+T+ +V I + +F+ + +
Sbjct: 19 MLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHSPLTN--IVPITLLVFAACEAAVGLA 76

Query: 234 LII 226
L++
Sbjct: 77 LLV 79


tr_hit_id B6AFN7
Definition tr|B6AFN7|B6AFN7_9CRYT Putative uncharacterized protein OS=Cryptosporidium muris RN66
Align length 39
Score (bit) 35.4
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918416|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_C04.
(557 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6AFN7|B6AFN7_9CRYT Putative uncharacterized protein OS=Crypt... 35 2.1
tr|A7V844|A7V844_BACUN Putative uncharacterized protein OS=Bacte... 34 4.6

>tr|B6AFN7|B6AFN7_9CRYT Putative uncharacterized protein
OS=Cryptosporidium muris RN66 GN=CMU_034140 PE=4 SV=1
Length = 2280

Score = 35.4 bits (80), Expect = 2.1
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -1

Query: 440 VRGMPKFLMSWYTSMVLSRHDLLLRAVPFHCFD*TPPTM 324
+R + KFL+SW TS + RHD R +PFH F T T+
Sbjct: 1661 IRLVDKFLLSWITSSMYRRHD-TERLIPFHLFTITGITL 1698


>tr|A7V844|A7V844_BACUN Putative uncharacterized protein
OS=Bacteroides uniformis ATCC 8492 GN=BACUNI_03761 PE=4
SV=1
Length = 312

Score = 34.3 bits (77), Expect = 4.6
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1

Query: 112 LIMIIVLLPHVYIQGPVSRKLVAYKKILPKLPSKKAKPN 228
L+MIIV + V G ++ +LV ++K+ P+LP + K N
Sbjct: 274 LVMIIVAVTFVIAGGNITSQLVRFRKLFPRLPIRSKKRN 312