BP918413 |
Clone id |
YMU001_000113_C01 |
Library |
YMU01 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000113_C01. |
Accession |
BP918413 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGAGCTGCAGGCCAACAAGAAGGAGCTGGCCCAGCTGAAGTGTTTGCAGGAACTGATGTG CTAGCAGGAGTTCAGGAGCATATGGCTGAAGCAGCAGGGACAAGTGCAATTGCATGACAG GCTAAAGATGTTGCAGAGGAGGACACAGAAGCTGCAGGAGGAATTCACAACTTAGATGAT CCAGTGCAAATGATTGTGGATGAGAAACTCTGTCAGGACACTGAAAGTACTAAGGAGGCA GTTACAGTTCAAGTGGATGCAAAGGTTGAAGAGTTTGACAAAGAAACTCCAACTACAGCA GCAGTTTCACAACAAACTGAATTCAAGGATCAGCTGGTGGATGAATTTTTGATCAAGGGA TATTGTGGGTTCTCACAAGGTTTGAGAAACCTTGCCCACCAGGTGTGCCAGGTGTTAGTG CCTGATTTATCAGGGCTTTCAGGGCAGTCAGGCTATTACTTTTTGAACTATAACTAAAGA CCTTTAACTTTTGAACCTCAGGGAGATGTGGACATTAGTACTTATAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8L1A8 |
Definition |
sp|Q8L1A8|PDXS_BACCI Pyridoxal biosynthesis lyase pdxS OS=Bacillus circulans |
Align length |
73 |
Score (bit) |
33.9 |
E-value |
0.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8DB34 |
Definition |
tr|Q8DB34|Q8DB34_VIBVU AAA ATPase OS=Vibrio vulnificus |
Align length |
90 |
Score (bit) |
37.0 |
E-value |
0.62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918413|Adiantum capillus-veneris mRNA, clone: YMU001_000113_C01. (528 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8DB34|Q8DB34_VIBVU AAA ATPase OS=Vibrio vulnificus GN=VV1_19... 37 0.62 tr|Q3V3A4|Q3V3A4_MOUSE Putative uncharacterized protein OS=Mus m... 36 1.1 tr|A1Z8E8|A1Z8E8_DROME CG30490 OS=Drosophila melanogaster GN=CG3... 35 1.8 tr|Q91255|Q91255_PETMA NF-180 OS=Petromyzon marinus PE=2 SV=1 35 2.4 tr|A1WUF8|A1WUF8_HALHL Methyl-accepting chemotaxis sensory trans... 35 2.4 tr|B3KK87|B3KK87_9BACI Pyridoxine biosynthesis protein OS=Geobac... 34 4.0 tr|A6NFW2|A6NFW2_HUMAN Putative uncharacterized protein KRTAP5-4... 34 4.0 tr|Q3INQ0|Q3INQ0_NATPD 3-hydroxyacyl-CoA dehydrogenase 3/ enoyl-... 34 4.0 tr|B1I157|B1I157_DESAP Pyridoxine biosynthesis protein OS=Desulf... 34 5.3 tr|B7C5M1|B7C5M1_9FIRM Putative uncharacterized protein OS=Roseb... 34 5.3 tr|B6WA30|B6WA30_9FIRM Putative uncharacterized protein OS=Anaer... 34 5.3 tr|A8RT17|A8RT17_9CLOT Putative uncharacterized protein OS=Clost... 34 5.3 tr|A8MUN0|A8MUN0_HUMAN Putative uncharacterized protein KRTAP5-4... 34 5.3 tr|Q725F2|Q725F2_LISMF Putative uncharacterized protein OS=Liste... 33 6.9 tr|Q4EHT9|Q4EHT9_LISMO Putative uncharacterized protein OS=Liste... 33 6.9 tr|B2BCX2|B2BCX2_PAEPO Pyridoxal-5-P synthase OS=Paenibacillus p... 33 6.9 tr|B1SEW3|B1SEW3_9STRE Putative uncharacterized protein OS=Strep... 33 6.9 tr|B7QKY0|B7QKY0_IXOSC Keratin-associated protein 5-9, putative ... 33 6.9 tr|A2DJ99|A2DJ99_TRIVA Putative uncharacterized protein OS=Trich... 33 6.9 tr|Q9Z1D2|Q9Z1D2_MOUSE Brca1 OS=Mus musculus GN=Brca1 PE=2 SV=1 33 9.0 tr|Q3UMS5|Q3UMS5_MOUSE Putative uncharacterized protein (Fragmen... 33 9.0 tr|A2A4Q4|A2A4Q4_MOUSE Breast cancer 1 OS=Mus musculus GN=Brca1 ... 33 9.0 tr|B5E5W1|B5E5W1_STRP4 Pyridoxal biosynthesis lyase OS=Streptoco... 33 9.0 tr|B2IQT5|B2IQT5_STRPS Pyridoxine biosynthesis protein OS=Strept... 33 9.0 tr|B1ICP9|B1ICP9_STRPI Pyridoxine biosynthesis protein OS=Strept... 33 9.0 tr|B8ZL14|B8ZL14_STRPN Putative pyridoxine biosynthesis protein ... 33 9.0 tr|B2E4Z1|B2E4Z1_STRPN Pyridoxine biosynthesis protein OS=Strept... 33 9.0 tr|B2DYJ5|B2DYJ5_STRPN Pyridoxine biosynthesis protein OS=Strept... 33 9.0 tr|B2DWP6|B2DWP6_STRPN Pyridoxine biosynthesis protein OS=Strept... 33 9.0 tr|B2DPW3|B2DPW3_STRPN Pyridoxine biosynthesis protein OS=Strept... 33 9.0
>tr|Q8DB34|Q8DB34_VIBVU AAA ATPase OS=Vibrio vulnificus GN=VV1_1991 PE=4 SV=1 Length = 1951
Score = 37.0 bits (84), Expect = 0.62 Identities = 24/90 (26%), Positives = 37/90 (41%) Frame = +1
Query: 46 AGTDVLAGVQEHMAEAAGTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDEKLCQDTE 225 A T + V E + A+ + D +D E I ++ +PV + L QD E Sbjct: 976 ASTSLATEVTEEALDGHPDDAMLSELDDTQAQDDELVDLIDDIAEPVSTDAEALLAQDIE 1035
Query: 226 STKEAVTVQVDAKVEEFDKETPTTAAVSQQ 315 +E + +EE ETPT AV + Sbjct: 1036 DAQELEATATEMPLEEPVHETPTPNAVPNE 1065
>tr|Q3V3A4|Q3V3A4_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Vps52 PE=2 SV=1 Length = 723
Score = 36.2 bits (82), Expect = 1.1 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 7/128 (5%) Frame = +1
Query: 82 MAEAAGTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDEKLCQDTESTKEAVTVQVDA 261 MA AA + +A DV EE+ GG L +P+Q+ E E + V V + A Sbjct: 7 MAAAARELVLRAEASDVEEEEGPLGGG-SGLQEPLQL--GELDITSDEFILDEVDVHIQA 63
Query: 262 KVE-EFDKETPTTAA----VSQQTEFKDQLVDEFLIKGYCGFSQGLRNLAHQV--CQVLV 420 +E E KE T S+Q E + Q +++ I+ Y S+ + +L +Q+ C ++ Sbjct: 64 NLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACDAVL 123
Query: 421 PDLSGLSG 444 + + G Sbjct: 124 ERMEQMLG 131
>tr|A1Z8E8|A1Z8E8_DROME CG30490 OS=Drosophila melanogaster GN=CG30490 PE=4 SV=1 Length = 363
Score = 35.4 bits (80), Expect = 1.8 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -1
Query: 135 CNIFSLSCNCTCPCCFSHMLLNSC*HISSCKHFSWASSFLLACS 4 C++ SC+C C CC H+ L +C ++ F+ +S L+ACS Sbjct: 67 CHLPPWSCSCFCCCCACHLALAAC--NNNLSDFALFASGLMACS 108
>tr|Q91255|Q91255_PETMA NF-180 OS=Petromyzon marinus PE=2 SV=1 Length = 1110
Score = 35.0 bits (79), Expect = 2.4 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Frame = +1
Query: 64 AGVQEHMAEAAGTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDEKLCQDTESTKEAV 243 A V+E AEAA A ++ EED EA +D + +E ++ E +E V Sbjct: 658 AEVEEEEAEAAEAEAEEEAEEEAGEEDVEAESKEEEEEDSKEADAEEDEAEEEEVKEEEV 717
Query: 244 TVQVDAKVEEFDKETPTTAAVSQQ---TEFKDQLVDE 345 T + EE + E AA S++ E KD+ +E Sbjct: 718 T---KSDAEEAEAEAEEEAAKSEEEAAEEAKDEAEEE 751
>tr|A1WUF8|A1WUF8_HALHL Methyl-accepting chemotaxis sensory transducer OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=Hhal_0534 PE=4 SV=1 Length = 439
Score = 35.0 bits (79), Expect = 2.4 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Frame = +1
Query: 97 GTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDEKLCQDTESTKEAVTVQVDAKVEEF 276 G + +A K +A++ +A IH + D + I+D + + EST +A V+ + + Sbjct: 165 GFAVVAEHVKALAKQTADATDDIHTILDELTQIIDRLVQKGGESTLQAEAVRDGTEAIQE 224
Query: 277 DKETPTTAAVSQQTEFKDQLVDEFLIKGYCGFS-QGLRNLAHQVCQ 411 ET +A T+ I YC + +GL LA V Q Sbjct: 225 IMETAGSAMADIDTDSGRVRESVHTIDHYCRRTVEGLEELAEAVRQ 270
>tr|B3KK87|B3KK87_9BACI Pyridoxine biosynthesis protein OS=Geobacillus sp. Y412MC10 GN=GYMC10DRAFT_6005 PE=4 SV=1 Length = 293
Score = 34.3 bits (77), Expect = 4.0 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Frame = +1
Query: 55 DVLAGVQEHMAEAAGTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDE--KLCQDTES 228 DV+ Q +AEAAG +A+ A + D AAGG+ + DP IV+E K+ Sbjct: 23 DVMNAEQAKIAEAAGATAV--MALERVPSDIRAAGGVARMADPT--IVEEVMKVVSIPVM 78
Query: 229 TKEAVTVQVDAKVEE 273 K + V+AKV E Sbjct: 79 AKARIGHYVEAKVLE 93
>tr|A6NFW2|A6NFW2_HUMAN Putative uncharacterized protein KRTAP5-4 (Fragment) OS=Homo sapiens GN=KRTAP5-4 PE=4 SV=2 Length = 202
Score = 34.3 bits (77), Expect = 4.0 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1
Query: 114 CNCTCPCCFSHMLLNSC*HISSCKHFSWASSFLLACSS 1 C+C PCCFS +SC S CK + SS C S Sbjct: 132 CSCCKPCCFSSGCGSSCCQSSCCKPYCCQSSCCKPCCS 169
>tr|Q3INQ0|Q3INQ0_NATPD 3-hydroxyacyl-CoA dehydrogenase 3/ enoyl-CoA hydratase I 3 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=hbd_3 PE=3 SV=1 Length = 655
Score = 34.3 bits (77), Expect = 4.0 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = +1
Query: 55 DVLAGVQEHMAEAA----GTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDEKLCQDT 222 DV + V+EH+ E A TS+++ E E G+H + PV+M + E + Sbjct: 103 DVYSDVEEHLPEHAIVTSNTSSLSITDLSEVTERPEQFAGMHFFNPPVRMQLVEVI--SG 160
Query: 223 ESTKEAVTVQVDAKVEEFDK 282 E T E +A E+FDK Sbjct: 161 EHTDEETLAVTEALAEDFDK 180
>tr|B1I157|B1I157_DESAP Pyridoxine biosynthesis protein OS=Desulforudis audaxviator (strain MP104C) GN=Daud_0009 PE=4 SV=1 Length = 294
Score = 33.9 bits (76), Expect = 5.3 Identities = 26/71 (36%), Positives = 33/71 (46%) Frame = +1
Query: 55 DVLAGVQEHMAEAAGTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDEKLCQDTESTK 234 DV Q +AEAAG A+ A + D AAGGI + DP + + Sbjct: 24 DVTTPEQARIAEAAGACAV--MALERVPADIRAAGGIARMADPTVI----------QRIM 71
Query: 235 EAVTVQVDAKV 267 EAVT+ V AKV Sbjct: 72 EAVTIPVMAKV 82
>tr|B7C5M1|B7C5M1_9FIRM Putative uncharacterized protein OS=Roseburia intestinalis L1-82 GN=ROSINTL182_04330 PE=4 SV=1 Length = 429
Score = 33.9 bits (76), Expect = 5.3 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1
Query: 52 TDVLAGVQEHMAEAA-GTSAIA*QAKDVAEEDTEAAGGIHNLDDPVQMIVDEKLCQDTES 228 +D L ++E + A G+ +A A+D+A+ T+ A + +L V I ++ L Sbjct: 175 SDALKSIRESSNQVAQGSDQLAVSAQDLAKNATDQAVAVDSLAQSVSEITEQIL-----G 229
Query: 229 TKEAVTVQVDAKVEEFDKETPTTAAVSQQ 315 T +++ + V + K+ TTAAVSQQ Sbjct: 230 TSKSIDI-----VHDKAKDVGTTAAVSQQ 253
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