BP918384 |
Clone id |
YMU001_000112_H04 |
Library |
YMU01 |
Length |
262 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000112_H04. |
Accession |
BP918384 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2272Contig1 |
Sequence |
GCCTCTGTGTAACAATCCCTCCATAAACCCACATATGACCCAGACATCAATGAGGCAGAT CTCGACAGAAAGCTTCCTCACTCTACCGCCTATACGTTATTCATCTGAGTCGGATCCTGC ATTTTCTCCACCTCGCCGAACACTACTCTTCTTGCCCTTTACCCTTTGCATTGACATTTC TCCATCCAATGTCAACATGCTGGACTTTGCCAGCCTCTCTTCCAGCTCCTCTGTAGTGAA CTCATCAGTTCCTCCCAATTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O64628 |
Definition |
sp|O64628|TXND9_ARATH Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana |
Align length |
53 |
Score (bit) |
48.9 |
E-value |
8.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNH2 |
Definition |
tr|A9NNH2|A9NNH2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
58 |
Score (bit) |
62.0 |
E-value |
1.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918384|Adiantum capillus-veneris mRNA, clone: YMU001_000112_H04. (262 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNH2|A9NNH2_PICSI Putative uncharacterized protein OS=Picea... 62 1e-08 tr|A7QW72|A7QW72_VITVI Chromosome chr3 scaffold_199, whole genom... 56 8e-07 tr|A5BWR2|A5BWR2_VITVI Putative uncharacterized protein OS=Vitis... 56 8e-07 tr|A9PC45|A9PC45_POPTR Putative uncharacterized protein OS=Popul... 54 5e-06 tr|B7FMC0|B7FMC0_MEDTR Putative uncharacterized protein OS=Medic... 52 1e-05 tr|Q6YW09|Q6YW09_ORYSJ Os08g0250700 protein OS=Oryza sativa subs... 49 1e-04 tr|A3BR71|A3BR71_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A2YT09|A2YT09_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|Q541V3|Q541V3_ARATH Putative ATP binding protein OS=Arabidops... 49 1e-04 tr|A9SSS0|A9SSS0_PHYPA Predicted protein OS=Physcomitrella paten... 46 8e-04 tr|Q9LSU4|Q9LSU4_ARATH Genomic DNA, chromosome 3, P1 clone: MWL2... 45 0.001 tr|Q8L9H7|Q8L9H7_ARATH Putative ATP binding protein OS=Arabidops... 45 0.001 tr|Q8GWR9|Q8GWR9_ARATH Putative uncharacterized protein At3g2558... 45 0.002 tr|A8HMA7|A8HMA7_CHLRE Thioredoxin-like ATP binding protein 2 OS... 40 0.076 tr|A8XW55|A8XW55_CAEBR CBR-TAG-170 protein OS=Caenorhabditis bri... 40 0.076 tr|A8Q8L6|A8Q8L6_BRUMA Apacd-prov protein, putative OS=Brugia ma... 38 0.22 tr|B6KXH8|B6KXH8_BRAFL Putative uncharacterized protein OS=Branc... 37 0.49 tr|A8T499|A8T499_9VIBR Predicted transcriptional regulator OS=Vi... 36 1.1 tr|Q53HG4|Q53HG4_HUMAN ATP binding protein associated with cell ... 36 1.1 tr|B5DGA5|B5DGA5_SALSA ATP binding protein associated with cell ... 35 1.4 tr|B3TP06|B3TP06_VIBAN GroEL OS=Vibrio anguillarum PE=4 SV=1 35 1.9 tr|Q5R6G6|Q5R6G6_PONAB Putative uncharacterized protein DKFZp468... 35 1.9 tr|B3RW97|B3RW97_TRIAD Putative uncharacterized protein OS=Trich... 35 1.9 tr|B2R9G8|B2R9G8_HUMAN cDNA, FLJ94384, Homo sapiens ATP binding ... 35 1.9 tr|B7VHQ8|B7VHQ8_VIBSP 60 kDa chaperonin (Protein Cpn60) (GroEL ... 35 2.4 tr|B5DLY5|B5DLY5_DROPS GA23727 OS=Drosophila pseudoobscura pseud... 35 2.4 tr|A3UR04|A3UR04_VIBSP 60 kDa chaperonin OS=Vibrio splendidus 12... 34 3.2 tr|B4GVP2|B4GVP2_DROPE GL14692 OS=Drosophila persimilis GN=GL146... 34 3.2 tr|Q7ZVX9|Q7ZVX9_DANRE Thioredoxin domain containing 9 OS=Danio ... 34 4.2 tr|B7PPT4|B7PPT4_IXOSC Putative uncharacterized protein OS=Ixode... 34 4.2
>tr|A9NNH2|A9NNH2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 217
Score = 62.0 bits (149), Expect = 1e-08 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 4/58 (6%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVKGKKS----SVRRGGENAGSDSDE 100 ELGGTDEF+TEELEERLAKS ++ +GE S R + K S S+R+ G SDSD+ Sbjct: 160 ELGGTDEFSTEELEERLAKSKIIVFEGESSASRFRSKVSSNNRSIRQSGNGDDSDSDD 217
>tr|A7QW72|A7QW72_VITVI Chromosome chr3 scaffold_199, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007723001 PE=4 SV=1 Length = 238
Score = 56.2 bits (134), Expect = 8e-07 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVKGKKS--SVRRGGENAGSDSD 103 ELGGTDEF+TEELEERLAK+ ++ +GE S+ K SVR+ + SDSD Sbjct: 184 ELGGTDEFSTEELEERLAKAQVIIFEGESSLHASKSSSQPRSVRQSSNSYSSDSD 238
>tr|A5BWR2|A5BWR2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013928 PE=4 SV=1 Length = 207
Score = 56.2 bits (134), Expect = 8e-07 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVKGKKS--SVRRGGENAGSDSD 103 ELGGTDEF+TEELEERLAK+ ++ +GE S+ K SVR+ + SDSD Sbjct: 153 ELGGTDEFSTEELEERLAKAQVIIFEGESSLHASKSSSQPRSVRQSSNSYSSDSD 207
>tr|A9PC45|A9PC45_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 213
Score = 53.5 bits (127), Expect = 5e-06 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 3/56 (5%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVKGK---KSSVRRGGENAGSDSD 103 ELGGTDEF TE+LEERLAK+ ++ +GE S+ K + SVR+ + SDSD Sbjct: 158 ELGGTDEFNTEDLEERLAKAQVIFFEGESSLNSSKSSAQTRRSVRQSESHDSSDSD 213
>tr|B7FMC0|B7FMC0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 213
Score = 52.0 bits (123), Expect = 1e-05 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 3/56 (5%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVKG---KKSSVRRGGENAGSDSD 103 ELGGTD+F+TE LEERLAK+ ++ L+GE S+ R + K SVR+ SDS+ Sbjct: 158 ELGGTDDFSTEVLEERLAKAQVIFLEGESSIHRARSGAQTKRSVRQSTTADSSDSE 213
>tr|Q6YW09|Q6YW09_ORYSJ Os08g0250700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0012K14.33 PE=2 SV=1 Length = 210
Score = 49.3 bits (116), Expect = 1e-04 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVK-GKKSSVRRGGENAGSDSD 103 ELGG D+F+TE+LEERLAK+ ++ LDGE K K SVR+ SDS+ Sbjct: 157 ELGGKDDFSTEDLEERLAKAQVIFLDGEGPAHASKQATKRSVRQSDTGNSSDSE 210
>tr|A3BR71|A3BR71_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025543 PE=4 SV=1 Length = 112
Score = 49.3 bits (116), Expect = 1e-04 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVK-GKKSSVRRGGENAGSDSD 103 ELGG D+F+TE+LEERLAK+ ++ LDGE K K SVR+ SDS+ Sbjct: 59 ELGGKDDFSTEDLEERLAKAQVIFLDGEGPAHASKQATKRSVRQSDTGNSSDSE 112
>tr|A2YT09|A2YT09_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28462 PE=4 SV=1 Length = 190
Score = 49.3 bits (116), Expect = 1e-04 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVK-GKKSSVRRGGENAGSDSD 103 ELGG D+F+TE+LEERLAK+ ++ LDGE K K SVR+ SDS+ Sbjct: 137 ELGGKDDFSTEDLEERLAKAQVIFLDGEGPAHASKQATKRSVRQSDTGNSSDSE 190
>tr|Q541V3|Q541V3_ARATH Putative ATP binding protein OS=Arabidopsis thaliana GN=At2g18990 PE=2 SV=1 Length = 211
Score = 48.9 bits (115), Expect = 1e-04 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSMLTLDGEMSMQRVKGKKSSVRRGGENAGSDSD 103 ELGG D+F+TE+LEER+A++ ++ DGE S + K R ++A SDSD Sbjct: 157 ELGGKDDFSTEDLEERIARAQVIHYDGESSSLKPKSTTQVRRNVRQSARSDSD 209
>tr|A9SSS0|A9SSS0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_215344 PE=4 SV=1 Length = 217
Score = 46.2 bits (108), Expect = 8e-04 Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 2/56 (3%) Frame = -2
Query: 261 ELGGTDEFTTEELEERLAKSSML-TLDGEMSMQRVKGKKSSVRRGGEN-AGSDSDE 100 ELGGTD+F+TE+LE+RLAKS ++ +G ++ K SVR+G + +G +SD+ Sbjct: 160 ELGGTDDFSTEDLEDRLAKSGVIYGAEGRVARPVASQSKRSVRQGTSSYSGDNSDD 215
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