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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918352
Clone id YMU001_000112_E04
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTCCAACAAGCACAAATGCACTAACCCATCGCAGAATCTTGCACATGGTAATCAATGCA
TGCCAAGGATGCACTTCTTTTGCACCTCTTTGTAAATAAAAATTTGTCCTAGTCCAAGCT
CGAAGACTCGAGGCTTGCACTAAACCCTTTGTTGAGATCAAAAGAAGTCCAGCCTCTGAT
AACAAACCATGCTGAAATCTGAAGACATTGAATGAACTAGGTTGACGGCAGCAACAGCCT
CAACCTCTATATTCACAAGGAGTTAAGTACCCTTAATCTTCTATTTCCTTACACTCACAA
CCAAGAGGTCACCTAGGGCTTAACATTCACCACTACCAAGGCCCTGTTCTGCTTCTCAAC
AACGCTCTCGGTTGCTTTGAAACTTCCTGTGTAACAGCAAGCACCTTTTTTAACTGTCTT
TCCGCAGTCTCCTGTTTCTGCTTGAGTTTCGTATTCTCTGCCCTCAGTTCAGTCAGCTCA
TTCTCCAGTTCCACTGTATAAGCC
■■Homology search results ■■ -
sp_hit_id Q84JK2
Definition sp|Q84JK2|FD_ARATH Protein FD OS=Arabidopsis thaliana
Align length 56
Score (bit) 37.7
E-value 0.03
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918352|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_E04.
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q84JK2|FD_ARATH Protein FD OS=Arabidopsis thaliana GN=FD PE=1...    38   0.030
sp|Q1QT72|ZAPB_CHRSD Cell division protein zapB OS=Chromohalobac...    35   0.20 
sp|Q72AW6|CLPB_DESVH Chaperone protein clpB OS=Desulfovibrio vul...    31   3.7  
sp|Q7T2G1|I2B2A_DANRE Interferon regulatory factor 2-binding pro...    31   3.8  
sp|Q0VBY1|ODF2L_BOVIN Outer dense fiber protein 2-like OS=Bos ta...    30   4.9  
sp|Q6FLB2|DAM1_CANGA DASH complex subunit DAM1 OS=Candida glabra...    30   4.9  
sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsi...    30   4.9  
sp|Q5DTX6|K1462_MOUSE Uncharacterized protein KIAA1462 OS=Mus mu...    30   4.9  
sp|A2AL36|CP110_MOUSE Centriolin OS=Mus musculus GN=Cep110 PE=1 ...    30   6.4  
sp|A2QN07|MPKC_ASPNC Mitogen-activated protein kinase mpkC OS=As...    30   8.3  
sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculu...    30   8.3  
sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapien...    30   8.3  
sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis th...    30   8.3  
sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus mus...    30   8.3  
sp|Q9BL02|CUT_CAEEL Homeobox protein cut-like ceh-44 OS=Caenorha...    30   8.3  
sp|Q9TU23|CE290_BOVIN Centrosomal protein of 290 kDa (Fragment) ...    30   8.3  
sp|Q8IA98|CASP_CAEEL Protein CASP OS=Caenorhabditis elegans GN=c...    30   8.3  

>sp|Q84JK2|FD_ARATH Protein FD OS=Arabidopsis thaliana GN=FD PE=1
           SV=1
          Length = 285

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT ELE E+  L+AEN +LK++Q+    QLK   A+ Q    +   L RS T P+
Sbjct: 237 AYTNELELEVAHLQAENARLKRQQD----QLKMAAAIQQ---PKKNTLQRSSTAPF 285


>sp|Q1QT72|ZAPB_CHRSD Cell division protein zapB OS=Chromohalobacter
           salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
           13768) GN=zapB PE=3 SV=1
          Length = 69

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = -2

Query: 497 TVE-LENELTELRAENTKLKQKQETAERQLKKVLAVTQEV 381
           T+E L+ E  ELR ENT+LKQ+++  ER+L  +L   QE+
Sbjct: 19  TIEMLKMEAEELREENTRLKQERDEWERRLNGLLGKFQEI 58


>sp|Q72AW6|CLPB_DESVH Chaperone protein clpB OS=Desulfovibrio
           vulgaris (strain Hildenborough / ATCC 29579 / NCIMB
           8303) GN=clpB PE=3 SV=1
          Length = 865

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 488 LENELTELRAENTKLKQKQETAERQLKKVLAVTQEVSKQPRAL 360
           LENEL +LRAE T L  + E  +  +  V ++ +++ +   A+
Sbjct: 449 LENELADLRAEQTALLSQWEREKGSIDHVRSIKEDIERTRHAI 491


>sp|Q7T2G1|I2B2A_DANRE Interferon regulatory factor 2-binding
           protein 2-A OS=Danio rerio GN=irf2bp2a PE=2 SV=1
          Length = 501

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = +1

Query: 61  CQGCTSFAPLCK*KFVLVQARRLEACTKPFVEIKRSPASDNKPC*NLKTLNELG*RQQQP 240
           C+GC ++    + +FV+  AR+L+     F E  RSP    KP  +++++N      + P
Sbjct: 35  CRGCVNYEGADRIEFVIETARQLKR-AHGFQE-GRSPGPVGKPGKDMQSINHAEPGSRPP 92

Query: 241 QPL 249
           QPL
Sbjct: 93  QPL 95


>sp|Q0VBY1|ODF2L_BOVIN Outer dense fiber protein 2-like OS=Bos
           taurus GN=ODF2L PE=2 SV=1
          Length = 548

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -2

Query: 500 YTVELENELTELRAENTKLKQKQETAERQLKKV---LAVTQEVSKQPRALL 357
           +++E ENE   L  ENTKLK    T + ++  V   L   QEV KQ + L+
Sbjct: 292 HSIEYENETLNL--ENTKLKTTLATLKDEIASVENELLELQEVEKQQKTLI 340


>sp|Q6FLB2|DAM1_CANGA DASH complex subunit DAM1 OS=Candida glabrata
           GN=DAM1 PE=3 SV=1
          Length = 307

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
 Frame = -2

Query: 494 VELENELTELRAENTKLKQK---------QETAERQLKKVLAVTQEVSKQP 369
           + L NE+ EL AE +KLK +          +T++ ++KK   ++Q + ++P
Sbjct: 116 IRLMNEIEELSAEKSKLKSRLNSLREKPNAQTSDEKMKKPSGISQPIFQKP 166


>sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis
           thaliana GN=BHLH115 PE=2 SV=1
          Length = 226

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -2

Query: 491 ELENELTELRAENTKLKQKQETAERQLKKVLAVTQEVSKQPRALLRSRT 345
           EL++E  ELR E  KLK ++E  ++QLK   A+  +   QP  L   +T
Sbjct: 137 ELKDEKNELRDEKQKLKVEKERIDQQLK---AIKTQPQPQPCFLPNPQT 182


>sp|Q5DTX6|K1462_MOUSE Uncharacterized protein KIAA1462 OS=Mus
           musculus GN=Kiaa1462 PE=2 SV=2
          Length = 1320

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +1

Query: 175 SDNKPC*NLKTLNELG*RQQQPQPLYSQGVKYP*SSISLHSQPRGHLGLNIHHYQGP 345
           S ++P  NL+  +  G     P+P + + +K P    S HSQPRG  G   H ++ P
Sbjct: 265 SPSEPMRNLEKASSSG---PFPRPKFGKPLKTP--CYSSHSQPRGEGGFQDHQHRDP 316


>sp|A2AL36|CP110_MOUSE Centriolin OS=Mus musculus GN=Cep110 PE=1
           SV=2
          Length = 2334

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQETAERQLKKVLAVTQEVSKQPRALLRSRTG 342
           AY  ELE +L    AE ++LKQ+ E   R+ +   +V Q   ++ R  LR   G
Sbjct: 704 AYETELETQLKLKDAETSQLKQELEKLLRRTQLEQSVLQTELEKERESLRDALG 757


>sp|A2QN07|MPKC_ASPNC Mitogen-activated protein kinase mpkC
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=mpkC PE=3 SV=1
          Length = 396

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 350 CFSTTLSVALKLPV*QQAPFLTVFPQSPVSA 442
           C  TTL +   LP  Q AP+ T+FP S  +A
Sbjct: 242 CTKTTLDLVKSLPKRQPAPWATLFPDSDENA 272
tr_hit_id Q00M78
Definition tr|Q00M78|Q00M78_SOYBN Bzip transcription factor OS=Glycine max
Align length 60
Score (bit) 47.4
E-value 0.0004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918352|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_E04.
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00M78|Q00M78_SOYBN Bzip transcription factor OS=Glycine max ...    47   4e-04
tr|A4ZGR9|A4ZGR9_SOYBN Transcription factor bZIP71 (Fragment) OS...    47   4e-04
tr|B5QTD2|B5QTD2_BETVU ABA-responsive element binding protein 1 ...    47   5e-04
tr|Q1HGG1|Q1HGG1_9ROSI Abscisic acid responsive element-binding ...    47   7e-04
tr|Q94KA6|Q94KA6_PHAVU BZIP transcription factor 6 OS=Phaseolus ...    46   0.001
tr|Q0PN11|Q0PN11_9FABA BZIP transcription factor OS=Caragana kor...    45   0.001
tr|Q9M4H1|Q9M4H1_VITVI Putative ripening-related bZIP protein OS...    44   0.004
tr|A7NTW9|A7NTW9_VITVI Chromosome chr18 scaffold_1, whole genome...    44   0.004
tr|Q6QPK1|Q6QPK1_SOLLC AREB-like protein OS=Solanum lycopersicum...    44   0.006
tr|A7P9K5|A7P9K5_VITVI Chromosome chr3 scaffold_8, whole genome ...    43   0.007
tr|A5AX01|A5AX01_VITVI Putative uncharacterized protein OS=Vitis...    43   0.007
tr|Q9SLX6|Q9SLX6_ORYSJ TRAB1 (BZIP transcription factor) OS=Oryz...    42   0.013
tr|Q8RYA2|Q8RYA2_ORYSA Raba1 (Fragment) OS=Oryza sativa GN=raba1...    42   0.013
tr|Q6ZDF3|Q6ZDF3_ORYSJ Os08g0472000 protein OS=Oryza sativa subs...    42   0.013
tr|B4FRB4|B4FRB4_MAIZE BZIP transcription factor ABI5 OS=Zea may...    42   0.016
tr|A5AYH6|A5AYH6_VITVI Putative uncharacterized protein OS=Vitis...    41   0.037
tr|Q9M7Q2|Q9M7Q2_ARATH ABA-responsive element binding protein 2 ...    40   0.081
tr|Q1AXX3|Q1AXX3_RUBXD Transcriptional regulator, MerR family OS...    39   0.11 
tr|Q400L1|Q400L1_CATRO Transcription factor BZIP1 OS=Catharanthu...    39   0.11 
tr|Q8RYD6|Q8RYD6_ARATH Basic leucine zipper transcription factor...    39   0.14 
tr|Q1PHV7|Q1PHV7_AVEFA ABA response element binding factor (Frag...    39   0.18 
tr|Q1PHV6|Q1PHV6_AVEFA ABA response element binding factor (Frag...    39   0.18 
tr|Q1PHV5|Q1PHV5_AVEFA ABA response element binding factor (Frag...    39   0.18 
tr|Q9M7Q3|Q9M7Q3_ARATH Abscisic acid responsive elements-binding...    38   0.24 
tr|Q1PHV8|Q1PHV8_AVEFA ABA response element binding factor (Frag...    38   0.24 
tr|Q9C5Q4|Q9C5Q4_ARATH BZIP protein DPBF2 OS=Arabidopsis thalian...    38   0.31 
tr|Q9M7Q5|Q9M7Q5_ARATH Abscisic acid responsive elements-binding...    37   0.53 
tr|Q9M7Q4|Q9M7Q4_ARATH Abscisic acid responsive elements-binding...    37   0.53 
tr|Q1PHV9|Q1PHV9_AVEFA ABA response element binding factor (Frag...    37   0.53 
tr|O23964|O23964_HELAN Dc3 promoter-binding factor-1 OS=Helianth...    37   0.53 

>tr|Q00M78|Q00M78_SOYBN Bzip transcription factor OS=Glycine max
           PE=3 SV=1
          Length = 417

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ----ETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ EN +L++KQ    E  + Q+K+++ + +EV +  R L R++TGPW
Sbjct: 360 AYTMELEAEVAKLKEENQELQKKQAEIMEIQKNQVKEMMNLQREVKR--RRLRRTQTGPW 417


>tr|A4ZGR9|A4ZGR9_SOYBN Transcription factor bZIP71 (Fragment)
           OS=Glycine max GN=bZIP71 PE=2 SV=1
          Length = 153

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ----ETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ EN +L++KQ    E  + Q+K+++ + +EV +  R L R++TGPW
Sbjct: 96  AYTMELEAEVAKLKEENEELQKKQAEIMEIQKNQVKEMMNLQREVKR--RRLRRTQTGPW 153


>tr|B5QTD2|B5QTD2_BETVU ABA-responsive element binding protein 1
           OS=Beta vulgaris subsp. vulgaris GN=areb1 PE=2 SV=1
          Length = 489

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ-ETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ EN +L++KQ E  E Q  +V+ +    S   + L R++TGPW
Sbjct: 433 AYTMELEQEVQKLKEENQELRKKQAEIMEMQKNQVMEMINAQSGSRKKLRRTQTGPW 489


>tr|Q1HGG1|Q1HGG1_9ROSI Abscisic acid responsive element-binding
           protein 2 OS=Populus suaveolens GN=ABF2 PE=2 SV=1
          Length = 406

 Score = 46.6 bits (109), Expect = 7e-04
 Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ-ETAERQLKKVL-AVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+AEN +L++KQ E  E Q  +V+  +T +   + R L R++TGPW
Sbjct: 349 AYTMELEAEVAKLKAENEELQKKQAEMMEMQKNQVMEMMTLQQGGKRRCLRRTQTGPW 406


>tr|Q94KA6|Q94KA6_PHAVU BZIP transcription factor 6 OS=Phaseolus
           vulgaris PE=2 SV=1
          Length = 415

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ----ETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ EN  L++KQ    E  + Q K+++ + +EV +  R L R++TGPW
Sbjct: 358 AYTMELEAEVAKLKEENQGLQKKQAEIMEIQKNQFKEMMNLQREVKR--RRLRRTQTGPW 415


>tr|Q0PN11|Q0PN11_9FABA BZIP transcription factor OS=Caragana
           korshinskii GN=AREB PE=3 SV=1
          Length = 423

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ----ETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ EN +L++KQ    E  + Q+K+++ + +EV +  + L R+ TGPW
Sbjct: 366 AYTMELEAEVAKLKEENEELQKKQEEIMEIQKNQVKEMMNLQREVKR--KCLRRTLTGPW 423


>tr|Q9M4H1|Q9M4H1_VITVI Putative ripening-related bZIP protein
           OS=Vitis vinifera GN=grip55 PE=2 SV=1
          Length = 447

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ----ETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ +N +L++KQ    E  + Q+ +++ + +EV K  R L R+ TGPW
Sbjct: 390 AYTMELEAEVAKLKEKNEELEKKQAEMMEMQKNQVMEMMNLQREVKK--RCLRRTLTGPW 447


>tr|A7NTW9|A7NTW9_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014828001
           PE=3 SV=1
          Length = 269

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ----ETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ +N +L++KQ    E  + Q+ +++ + +EV K  R L R+ TGPW
Sbjct: 212 AYTMELEAEVAKLKEKNEELEKKQAEMMEMQKNQVMEMMNLQREVKK--RCLRRTLTGPW 269


>tr|Q6QPK1|Q6QPK1_SOLLC AREB-like protein OS=Solanum lycopersicum
           PE=2 SV=1
          Length = 447

 Score = 43.5 bits (101), Expect = 0.006
 Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQ-ETAERQLKKVLAVTQ-EVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+ EN +L++KQ E  E Q  +V+ +   +   + R L R++TGPW
Sbjct: 390 AYTMELEAEVAKLKEENDELQKKQEEMLEMQKNQVIEMMNLQKGAKRRCLRRTQTGPW 447


>tr|A7P9K5|A7P9K5_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036604001
           PE=3 SV=1
          Length = 334

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = -2

Query: 503 AYTVELENELTELRAENTKLKQKQETAERQLKKVLAVTQEVSKQPRALLRSRTGPW 336
           AYT+ELE E+ +L+  N +L++KQ   E Q  ++L   ++   +   L R+ TGPW
Sbjct: 279 AYTLELEMEVAKLKEANEELQKKQADMEVQKNQILETIRQRGGKRLCLRRTLTGPW 334