BP918315
Clone id YMU001_000112_A12
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATGCCATGGTGAGCCTCATTTTTGACCCAGGATAGGGAGCCGTAGCCCCAGTATCGGGCC
AGCCTGCCATTGACCTTATGCTCCACACACGTGGCCATAGCCTCGCCATCTAGCCTTGCC
CTCGCTCAAGCACCCAGACAGAGTCTGCAATTTCCGATTCATGTGCTATGCTGCAAATCC
AGCGAGTCCAGCGCCGAAGCATGTGCTCGTCAAGCAATTCTACACTCGGTGATGTTACAG
CCTTCTTGGATTTCCTTGCTTATCTGTCCCCCGGATTCTCACAGCTATATTTTCCTATCA
ATGCCAATTCTTGCAATACCTCAAGAGCACATGTTGCTGCTGGTGCTGTTCCTCCTCATT
ACGAGAACACTGCTGCTAGTGTCGTTCCAAGCTCAGCCAGTGATGGGATTCCATTGCTTA
GTATCGTCAGCAACTAGTATTGTCAACAACCTTTTCTCGCTCTGCTGCTCATCCTCTTCC
GGTTCCATTGAACCCTTCAAGAAGGAGCAAGTCACAACACGCTGCCATGACCGACTCACA
TATTTTATGC
■■Homology search results ■■ -
sp_hit_id P30573
Definition sp|P30573|CHS3_CANAL Chitin synthase 3 OS=Candida albicans
Align length 44
Score (bit) 31.6
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918315|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_A12.
(550 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P30573|CHS3_CANAL Chitin synthase 3 OS=Candida albicans GN=CH... 32 2.6
sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1... 31 4.5
sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2 31 4.6
sp|Q7Z2K6|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1 O... 30 6.0
sp|Q5NDE9|AGO61_CANFA Uncharacterized glycosyltransferase AGO61 ... 30 6.0
sp|Q12151|UPC2_YEAST Sterol uptake control protein 2 OS=Saccharo... 30 7.7

>sp|P30573|CHS3_CANAL Chitin synthase 3 OS=Candida albicans GN=CHS3
PE=3 SV=1
Length = 1213

Score = 31.6 bits (70), Expect = 2.6
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3

Query: 294 PINANSCNTSRAHVAAGAVPPHYENTAASVVPSSASDGIPLLSI 425
P +N +TSR+H++ A PPH E +GIPL+ I
Sbjct: 70 PRKSNELSTSRSHLSNYATPPHQE--------EEEDEGIPLMDI 105


>sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1
OS=Caenorhabditis briggsae GN=ama-1 PE=3 SV=2
Length = 1853

Score = 30.8 bits (68), Expect = 4.5
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3

Query: 267 SPGFSQL---YFPINANSCNTSRAHVAAGAVPPHYENTAASVVPSSAS 401
SPGFS Y P + + TS AH V P Y T+ S P+S S
Sbjct: 1582 SPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPS 1629


>sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2
Length = 580

Score = 30.8 bits (68), Expect = 4.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2

Query: 26 PRIGSRSPSIGPACH*PYAPHTWP 97
P G+ P+ GP H PY PH +P
Sbjct: 456 PSYGALPPAYGPPAHLPYHPHVYP 479


>sp|Q7Z2K6|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1
OS=Homo sapiens GN=ERMP1 PE=1 SV=2
Length = 904

Score = 30.4 bits (67), Expect = 6.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2

Query: 143 VCNFRFMCYAANPASPAPKHVLVKQFYTR*CYSLLG 250
VC+ F Y++NPA+P PK V + Q TR + L G
Sbjct: 666 VCSGTFFPYSSNPANPKPKRVFL-QHMTRTFHDLEG 700


>sp|Q5NDE9|AGO61_CANFA Uncharacterized glycosyltransferase AGO61
OS=Canis familiaris GN=AGO61 PE=2 SV=1
Length = 580

Score = 30.4 bits (67), Expect = 6.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2

Query: 35 GSRSPSIGPACH*PYAPHTWP*PR---HLALPSLKHPDRVCNFRFMCYA 172
G ++P+ GPA YA H+ H DRVC F+++CY+
Sbjct: 39 GRQAPAPGPAPRADYARALQLLSEGGTHMVCTGRTHTDRVCRFKWLCYS 87


>sp|Q12151|UPC2_YEAST Sterol uptake control protein 2
OS=Saccharomyces cerevisiae GN=UPC2 PE=1 SV=1
Length = 913

Score = 30.0 bits (66), Expect = 7.7
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +3

Query: 120 PRSSTQTESAISDSCAMLQIQRVQRRSMCSSSNSTLGDV-TAFLDFLAYLSPGFSQLYFP 296
P S +E+ ++ A LQ + + S S +L TA + ++Y + FP
Sbjct: 373 PLQSQTSETTLNSDAATLQADALSQLSKMGLSLKSLSTFPTAGIGGVSYDFQELLGIKFP 432

Query: 297 IN---ANSCNTSRAHVAAGAVPPHYENTAASV 383
IN + + S A A + H+E AASV
Sbjct: 433 INNGNSRATKASNAEEALANMQEHHERAAASV 464


tr_hit_id B6K9B2
Definition tr|B6K9B2|B6K9B2_TOXGO WW domain-containing protein OS=Toxoplasma gondii ME49
Align length 106
Score (bit) 34.3
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918315|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_A12.
(550 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6K9B2|B6K9B2_TOXGO WW domain-containing protein OS=Toxoplasm... 34 4.4
tr|Q4SR77|Q4SR77_TETNG Chromosome 11 SCAF14528, whole genome sho... 34 5.8
tr|B3QVV0|B3QVV0_CHLT3 Multi-sensor hybrid histidine kinase OS=C... 34 5.9
tr|Q8VJ06|Q8VJ06_MYCTU Putative uncharacterized protein OS=Mycob... 33 7.5
tr|Q4Q4D2|Q4Q4D2_LEIMA Putative uncharacterized protein OS=Leish... 33 7.5

>tr|B6K9B2|B6K9B2_TOXGO WW domain-containing protein OS=Toxoplasma
gondii ME49 GN=TGME49_114360 PE=4 SV=1
Length = 3555

Score = 34.3 bits (77), Expect = 4.4
Identities = 36/106 (33%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Frame = +3

Query: 114 PCPRSSTQTESAISDSCAMLQIQRVQRRSMCSSSNS-TLGDVTAFLDFLAYLSPGFSQLY 290
PCP SS S S S A L S CS+ +S L AF A SP S
Sbjct: 1172 PCPSSSDSASS--SSSSASLPSHPSPTESSCSAPSSFRLPSTVAFPPSAA--SPATSCRL 1227

Query: 291 FPINANS-CNTSRAHVAAGA--------VPPHYENTAASVVPSSAS 401
P +++S C+TS A + PPH +AA+V PS+ S
Sbjct: 1228 SPSSSSSRCSTSFCCSACASSSCVLPSFAPPHLACSAATVAPSTRS 1273


>tr|Q4SR77|Q4SR77_TETNG Chromosome 11 SCAF14528, whole genome shotgun
sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00014040001 PE=4 SV=1
Length = 1239

Score = 33.9 bits (76), Expect = 5.8
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Frame = +3

Query: 204 CSSSNS-------TLGDVTAFL------DFLAYLSPGFSQLYFPINANSCNTSRAHVAAG 344
C+S+N+ T+ D FL FL Y + AN + V+ G
Sbjct: 843 CTSANNNTYWCLRTINDTHNFLFCEFATGFLEYFDLNTDPYQVGLKANRSLKTGLPVSGG 902

Query: 345 AVPPHYENTAASVVPSSASDGIPLLSIVS 431
V PH+ T VVP +A D + L +++
Sbjct: 903 VVLPHFSQTFPPVVPQAAFDALLFLQLIN 931


>tr|B3QVV0|B3QVV0_CHLT3 Multi-sensor hybrid histidine kinase
OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78)
GN=Ctha_0688 PE=4 SV=1
Length = 1487

Score = 33.9 bits (76), Expect = 5.9
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = -1

Query: 325 LEVLQELALIGKYSCENPGDR*ARKSKKAVTSPSVELLDEHMLRRWTRWICSIAHESEIA 146
LE LQ + + S +P D S S LL EH +R +++ C + + +
Sbjct: 641 LEELQPITSQTRRSLVHPED----------LSHSAILLKEHFKKRTSQYECEVRMKHKTG 690

Query: 145 DSVWVLERGQ 116
+ VWVLERG+
Sbjct: 691 EWVWVLERGK 700


>tr|Q8VJ06|Q8VJ06_MYCTU Putative uncharacterized protein
OS=Mycobacterium tuberculosis GN=MT3560 PE=4 SV=1
Length = 79

Score = 33.5 bits (75), Expect = 7.5
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3

Query: 84 HTRGHSLAI*PCP-----RSSTQTESAISDSCAMLQIQRVQRRSMCSSSNSTLG 230
HT H L + P P R STQ + +S CA + R +C +N TLG
Sbjct: 7 HTAYHGLMLAPDPARQARRPSTQPNAHLSAECAAMNRNHFTGREVCGHANRTLG 60


>tr|Q4Q4D2|Q4Q4D2_LEIMA Putative uncharacterized protein
OS=Leishmania major GN=LmjF33.0730 PE=4 SV=1
Length = 559

Score = 33.5 bits (75), Expect = 7.5
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +3

Query: 75 LMLHTRGHSLAI*PCPRSSTQTESAISDSCAMLQIQRVQRRSMCSSSNSTLGDVTAFLDF 254
+MLHTR ++ C + T T + + Q ++ R M SSS D
Sbjct: 1 MMLHTR-RTVYSCICVHTHTHTHTCGCPPPTLSQKKKRSRLFMSSSSGDEY-DPAEVTVH 58

Query: 255 LAYLSPGFSQLYFP-----INANSCNTSRAHVAAGAVPPHYENTAASVVPSSASDGIP 413
SP S P + + + N S A VAA TAASV+PSS+S P
Sbjct: 59 TTVASPSLSDTVVPSAAPFLRSAAGNASAATVAAAPALASLPKTAASVLPSSSSPTPP 116