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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918252
Clone id YMU001_000111_C09
Library
Length 426
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGATAGCGCAATAGTGCTTGTAAAGCACAGGTAGAGCTTCCCCACCCTATTTGGTACTTT
CTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCTGGTCACTTGGTTCACTCATGAGTA
TGACTCCTGCAACCCTCCATACAAACCTCGTTCTCCGAGAGCGCGAGCAACACTGACAAT
ACAACCGGCAGCAAAAGAGTTTATCAAGTATGAATGTAGTTAGTGCCTCTTCTACTTCCC
CCATCATAGCCCCCATCAATATAGCATCATAGACTCGCCGACGGTCGTCCATCATATGTT
CAAGCTTATTGACTCCCCTAGATATAATTATTCTGAAATCCCATGCTCTAGGTGTCCGAG
AGTGTGGTTAAAGAAGTTGCGTCACATGGCTCTCCATATGGATAGTGTGCGACTACTCTG
TGATGC
■■Homology search results ■■ -
sp_hit_id P52741
Definition sp|P52741|ZN134_HUMAN Zinc finger protein 134 OS=Homo sapiens
Align length 87
Score (bit) 31.6
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918252|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_C09.
         (426 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P52741|ZN134_HUMAN Zinc finger protein 134 OS=Homo sapiens GN...    32   1.4  
sp|P75134|Y657_MYCPN Uncharacterized protein MG443 homolog OS=My...    31   1.8  
sp|Q8WP17|KLOT_MACFA Klotho OS=Macaca fascicularis GN=KL PE=2 SV=1     30   3.0  
sp|A3M990|ENGB_ACIBT Probable GTP-binding protein engB OS=Acinet...    30   3.0  
sp|Q6F7Q4|ENGB_ACIAD Probable GTP-binding protein engB OS=Acinet...    30   3.0  
sp|Q2HJ44|GLD2_BOVIN Poly(A) RNA polymerase GLD2 OS=Bos taurus G...    30   4.0  
sp|Q9UEF7|KLOT_HUMAN Klotho OS=Homo sapiens GN=KL PE=1 SV=2            30   5.2  
sp|Q1AUH2|Y2009_RUBXD UPF0042 protein Rxyl_2009 OS=Rubrobacter x...    29   8.8  
sp|Q9P802|MIS18_SCHPO Kinetochore protein mis18 OS=Schizosacchar...    29   8.8  

>sp|P52741|ZN134_HUMAN Zinc finger protein 134 OS=Homo sapiens
           GN=ZNF134 PE=2 SV=2
          Length = 427

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 16/87 (18%)
 Frame = +2

Query: 209 YECS*CLFYFPHHS---PHQ--------YSIIDSPTVVHHMFKLIDSPRYNYSEIP--CS 349
           Y+C+ C  YF HHS    HQ        Y   D   V  H   L+     +  E P  CS
Sbjct: 260 YKCNECGKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCS 319

Query: 350 RCPRVWLKK---LRHMALHMDSVRLLC 421
            C + +  K   ++H  +H +S    C
Sbjct: 320 DCGKSFGHKYTLIKHQRIHTESKPFEC 346


>sp|P75134|Y657_MYCPN Uncharacterized protein MG443 homolog
           OS=Mycoplasma pneumoniae GN=MPN_657 PE=4 SV=1
          Length = 401

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +2

Query: 227 LFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIP--CSRCPRVWLKKLRHMALHM 400
           LF+ P+     +S++ + TVV H+F     PRYN++EI     +   V L  L   A H 
Sbjct: 286 LFFSPNLIATFFSVLFTGTVVSHLF-----PRYNFAEIKVFTDKIEEVRLALLNDKATHS 340

Query: 401 DSVR 412
            S++
Sbjct: 341 LSIQ 344


>sp|Q8WP17|KLOT_MACFA Klotho OS=Macaca fascicularis GN=KL PE=2 SV=1
          Length = 1014

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -3

Query: 328  IISRGVNKLEHMMDDRRRVYDAILMGAMMGEVEEALTTFILDKLFCCRLYCQCCSRSRRT 149
            IIS G++   H  DD+ RVY       M   + EAL   ILD +  C  +    +     
Sbjct: 872  IISNGIDDGLHAEDDQLRVY------YMQNYINEALKAHILDGINLCGYFAYSFNDRTAP 925

Query: 148  RF-VWRVAGVILMSEPS 101
            RF ++R A      +PS
Sbjct: 926  RFGLYRFAADQFEPKPS 942


>sp|A3M990|ENGB_ACIBT Probable GTP-binding protein engB
           OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC
           755) GN=engB PE=3 SV=1
          Length = 211

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 302 KLIDSPRYNYSEIPCSRCPRVWLKKLRHMALHMDSVR 412
           +L+D P Y Y+ +P     RVW K+L +  +H  S++
Sbjct: 64  RLVDLPGYGYAAVP-EDMKRVWQKELENYLIHRKSLQ 99


>sp|Q6F7Q4|ENGB_ACIAD Probable GTP-binding protein engB
           OS=Acinetobacter sp. (strain ADP1) GN=engB PE=3 SV=2
          Length = 237

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 302 KLIDSPRYNYSEIPCSRCPRVWLKKLRHMALHMDSVR 412
           +L+D P Y Y+ +P     R+W K+L +  +H  S++
Sbjct: 64  RLVDLPGYGYAAVP-EDMKRIWQKELENYLIHRQSLQ 99


>sp|Q2HJ44|GLD2_BOVIN Poly(A) RNA polymerase GLD2 OS=Bos taurus
           GN=PAPD4 PE=2 SV=1
          Length = 484

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 245 HSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEI 340
           HSPHQ      PT+V+H+  L D  RY+ S +
Sbjct: 94  HSPHQ-----EPTIVNHIVPLSDERRYSMSPL 120


>sp|Q9UEF7|KLOT_HUMAN Klotho OS=Homo sapiens GN=KL PE=1 SV=2
          Length = 1012

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = -3

Query: 328  IISRGVNKLEHMMDDRRRVYDAILMGAMMGEVEEALTTFILDKLFCCRLYCQCCSRSRRT 149
            IIS G++   H  DD+ RVY       M   + EAL   ILD +  C  +    +     
Sbjct: 870  IISNGIDDGLHAEDDQLRVY------YMQNYINEALKAHILDGINLCGYFAYSFNDRTAP 923

Query: 148  RF 143
            RF
Sbjct: 924  RF 925


>sp|Q1AUH2|Y2009_RUBXD UPF0042 protein Rxyl_2009 OS=Rubrobacter
           xylanophilus (strain DSM 9941 / NBRC 16129) GN=Rxyl_2009
           PE=3 SV=1
          Length = 305

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +2

Query: 119 YDSCNPPYKPRSPRARATLTIQPAAKEFIKYECS*CLFYFPHHS 250
           YD    P   R P  R  +   P A+EF++  C    F  P ++
Sbjct: 210 YDPALRPLTGRDPAVREAVLAHPDAREFVERVCGLLSFLIPRYA 253


>sp|Q9P802|MIS18_SCHPO Kinetochore protein mis18
           OS=Schizosaccharomyces pombe GN=mis18 PE=1 SV=1
          Length = 155

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 269 IDSPTVVHHMFKLIDSPRYNYSEIPCSRCPRVWLKKLRHMALHMDSVR 412
           +++   V   FK  D     YSE+ C+RC  V  K      +++D +R
Sbjct: 54  VENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIYLDDIR 101
tr_hit_id Q9KE00
Definition tr|Q9KE00|Q9KE00_BACHD Alpha-glucuronidase OS=Bacillus halodurans
Align length 113
Score (bit) 37.0
E-value 0.48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918252|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_C09.
         (426 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9KE00|Q9KE00_BACHD Alpha-glucuronidase OS=Bacillus haloduran...    37   0.48 
tr|Q5HV11|Q5HV11_CAMJR Ferredoxin-type protein NapG OS=Campyloba...    33   9.1  
tr|Q0PAA9|Q0PAA9_CAMJE Putative ferredoxin OS=Campylobacter jeju...    33   9.1  
tr|A8FLJ4|A8FLJ4_CAMJ8 Ferredoxin-type protein NapG OS=Campyloba...    33   9.1  
tr|A1VZC9|A1VZC9_CAMJJ Ferredoxin-type protein NapG OS=Campyloba...    33   9.1  
tr|B5QIR1|B5QIR1_CAMJE Putative ferredoxin OS=Campylobacter jeju...    33   9.1  
tr|A5KI64|A5KI64_CAMJE Putative ferredoxin OS=Campylobacter jeju...    33   9.1  
tr|A3ZKE3|A3ZKE3_CAMJE Ferredoxin-type protein NapG OS=Campyloba...    33   9.1  
tr|A3ZE78|A3ZE78_CAMJE Ferredoxin-type protein NapG OS=Campyloba...    33   9.1  
tr|A3YSJ2|A3YSJ2_CAMJE Ferredoxin-type protein NapG OS=Campyloba...    33   9.1  
tr|A3YM36|A3YM36_CAMJE Ferredoxin-type protein NapG OS=Campyloba...    33   9.1  
tr|A1TMR1|A1TMR1_ACIAC D-aminopeptidase DppA. Metallo peptidase....    33   9.4  

>tr|Q9KE00|Q9KE00_BACHD Alpha-glucuronidase OS=Bacillus halodurans
           GN=BH1061 PE=4 SV=1
          Length = 682

 Score = 37.0 bits (84), Expect = 0.48
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
 Frame = +2

Query: 104 WFTHEYDSCNPPYKPRSPRARATLTIQPAAKEFIKYE----CS*CLFYFPHHSPHQYSII 271
           W T+ Y  C+     R+       T Q  A+ +  YE    C   L  F HH P+ + + 
Sbjct: 542 WGTYHYADCHGIGVDRTVATGTGYTAQYFAENYELYEHLETCPDSLLLFFHHVPYTHKLK 601

Query: 272 DSPTVVHHMF-----------KLIDSPRYNYSEIPCSRCPRVWLKKLRHMALH 397
              TV+ H++           +L++S R    ++   R  +V L++L H A H
Sbjct: 602 SGVTVIQHIYDTHFSGAEQAEQLLESWRSLEGKVDSERFQQV-LERLEHQAEH 653


>tr|Q5HV11|Q5HV11_CAMJR Ferredoxin-type protein NapG
           OS=Campylobacter jejuni (strain RM1221) GN=napG PE=4
           SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|Q0PAA9|Q0PAA9_CAMJE Putative ferredoxin OS=Campylobacter jejuni
           GN=napG PE=3 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|A8FLJ4|A8FLJ4_CAMJ8 Ferredoxin-type protein NapG
           OS=Campylobacter jejuni subsp. jejuni serotype O:6
           (strain 81116 / NCTC 11828) GN=napG PE=4 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|A1VZC9|A1VZC9_CAMJJ Ferredoxin-type protein NapG
           OS=Campylobacter jejuni subsp. jejuni serotype O:23/36
           (strain 81-176) GN=napG PE=4 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|B5QIR1|B5QIR1_CAMJE Putative ferredoxin OS=Campylobacter jejuni
           subsp. jejuni CG8421 GN=napG PE=4 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGFCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|A5KI64|A5KI64_CAMJE Putative ferredoxin OS=Campylobacter jejuni
           subsp. jejuni CG8486 GN=Cj8486_0799 PE=4 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|A3ZKE3|A3ZKE3_CAMJE Ferredoxin-type protein NapG
           OS=Campylobacter jejuni subsp. jejuni 84-25 GN=napG PE=4
           SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|A3ZE78|A3ZE78_CAMJE Ferredoxin-type protein NapG
           OS=Campylobacter jejuni subsp. jejuni HB93-13
           GN=CJJHB9313_0794 PE=4 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121


>tr|A3YSJ2|A3YSJ2_CAMJE Ferredoxin-type protein NapG
           OS=Campylobacter jejuni subsp. jejuni 260.94 GN=napG
           PE=4 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 CS*CLFYFPHHSPHQYSIIDSPTVVHHMFKLIDSPRYNYSEIPCSR-CPRVWLKKLRHMA 391
           C  C+   P+ +    S++DSP      FK  + P Y   +IPC R CP   L K +H+ 
Sbjct: 55  CGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIRECPTDALDK-KHLE 113

Query: 392 LHMDSVRL 415
             ++S+++
Sbjct: 114 QGIESLKM 121