BP918200
Clone id YMU001_000110_F11
Library
Length 463
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACCAACAGATACTCCACGTGACACCACAGAGGCCACACATGGTCGGATAGGACACAAAT
CATCACCTTCCTAGGAGAACACATACAAGGATATAGACAACATCCAAATATCCCAACCAT
CTGAGAAGACCATGCAAACTCACTGCTAGTTAGAACCACCATGACTTTGTTGGTATAGTG
CAACATAAACTCTCCACTATGCATGTGTGACATATCAAGTCAATGCCAAGGCACGAGAGA
ATATCCATTGTAGGAAGGTGCAAACAGGGCTCCAAGGTTACAAGCAACCTCCTATATAAC
CCATGTCAAATAAATAGGAACATAAAAGGATAAAACTAGGGCGCCCATAAAAAAGGCCAC
AAGTGGCACGCCAAACAAAATTTGGGAAAAATCCCCCATAATGCCCAGACTCTAGAAAAG
CATCACAATTTAAGGCATAGCTGCAAAGAAGTCCTCTCTCATT
■■Homology search results ■■ -
sp_hit_id Q2V4F9
Definition sp|Q2V4F9|Y1301_ARATH Uncharacterized membrane protein At1g63010 OS=Arabidopsis thaliana
Align length 36
Score (bit) 29.6
E-value 6.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918200|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_F11.
(463 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2V4F9|Y1301_ARATH Uncharacterized membrane protein At1g63010... 30 6.7

>sp|Q2V4F9|Y1301_ARATH Uncharacterized membrane protein At1g63010
OS=Arabidopsis thaliana GN=At1g63010 PE=1 SV=1
Length = 697

Score = 29.6 bits (65), Expect = 6.7
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = -2

Query: 189 FMLHYTNKVMV----VLTSSEFAWSSQMVGIFGCCL 94
FML Y+ ++++ V+TS F+W++ V IF CL
Sbjct: 517 FMLKYSMEILLSESSVITSYYFSWTTSSVAIFLACL 552


tr_hit_id A7SP92
Definition tr|A7SP92|A7SP92_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis
Align length 165
Score (bit) 38.1
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918200|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_F11.
(463 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7SP92|A7SP92_NEMVE Predicted protein (Fragment) OS=Nematoste... 38 0.22
tr|A7U1X5|A7U1X5_WHEAT P450 OS=Triticum aestivum GN=P450 PE=3 SV=1 34 3.1
tr|B1W1V0|B1W1V0_STRGG Putative uncharacterized protein OS=Strep... 34 4.1
tr|B5HJU7|B5HJU7_STRPR C-5 sterol desaturase OS=Streptomyces pri... 34 4.1
tr|A3M0M6|A3M0M6_PICST Predicted protein OS=Pichia stipitis GN=P... 33 5.4
tr|B4P8D2|B4P8D2_DROYA GE13666 OS=Drosophila yakuba GN=GE13666 P... 33 5.4
tr|Q22YT3|Q22YT3_TETTH Cation channel family protein OS=Tetrahym... 33 9.2

>tr|A7SP92|A7SP92_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g125802 PE=4 SV=1
Length = 192

Score = 38.1 bits (87), Expect = 0.22
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 20/165 (12%)
Frame = -3

Query: 440 LCLKL*CFSRVWALWGIFPKFCLACHLWPFLWAP*FYPFMFLFI*HGLYRRLLVTLEPCL 261
LCL C SR+ + L CH++ F+ + H L VT CL
Sbjct: 1 LCLCFTCVSRILCV-----SLSLVCHVF------------FVSLGH-----LCVTYSLCL 38

Query: 260 HLPTMDILSCLGIDLICHT--------CIVESLCCTIPTKSWWF*LAVSL--HGLLRWLG 111
+ + + C+ + L+CH C+ SLC + S ++VSL H L
Sbjct: 39 WVTCVSRILCVSVSLVCHVFFVSLCHLCVTYSLCLWVTCVSRILCVSVSLVCHVFFVSLC 98

Query: 110 YLDVVYIL----------VCVLLGR**FVSYPTMCGLCGVTWSIC 6
+L V Y L +C+ + V + ++C LC T+S+C
Sbjct: 99 HLCVTYSLSLWVTCVSRFLCLSVSLVFHVFFVSLCHLC-FTFSLC 142


>tr|A7U1X5|A7U1X5_WHEAT P450 OS=Triticum aestivum GN=P450 PE=3 SV=1
Length = 514

Score = 34.3 bits (77), Expect = 3.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2

Query: 216 DMSHMHSGEFMLHYTNKVMVVLTSSEFAWSSQMVGIFGCCLYPCMCSPRKV 64
D++ +H LH VVL+S++ AW V CC P P+++
Sbjct: 72 DLARLHGPVMQLHLGKAPTVVLSSADAAWEGLKVHDLDCCTRPVSPGPKRL 122


>tr|B1W1V0|B1W1V0_STRGG Putative uncharacterized protein
OS=Streptomyces griseus subsp. griseus (strain JCM 4626
/ NBRC 13350) GN=SGR_5668 PE=4 SV=1
Length = 315

Score = 33.9 bits (76), Expect = 4.1
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = -2

Query: 408 LGIMGDFSQILFGVPLVAFFMGALVLS-FYVPIYLTWVI*EVACNLGALFAPSYNGYSLV 232
LG +G +L+ +P++A +MG L+ VP+ + W + + + S+ G+ ++
Sbjct: 51 LGSLG--FDLLWKIPILAIYMGVYELTPLRVPV-VWWTVLLMLLAQDFFYYWSHRGHHVI 107

Query: 231 PWH*LDMSHMHSGEFMLHYTNKVMVVLTSSEFAWSSQMVGIFGCCLYPCMCSPRKVMICV 52
L H+ +H++++ + T+ W+S V F L C P + C
Sbjct: 108 --RILWACHV------VHHSSEKFNLTTALRQPWTSATVWPFYLPLIACGVHPAALAFCQ 159

Query: 51 LSDHVWPLWCHVE 13
++ V+ W H E
Sbjct: 160 SANLVYQFWVHTE 172


>tr|B5HJU7|B5HJU7_STRPR C-5 sterol desaturase OS=Streptomyces
pristinaespiralis ATCC 25486 GN=SSDG_05453 PE=4 SV=1
Length = 284

Score = 33.9 bits (76), Expect = 4.1
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = -2

Query: 411 SLGIMGDFSQILFGVPLVAFFMGALVLS-FYVPIYLTWVI*EVACNLGALFAPSYNGYSL 235
S+G+ FS L+ +P+VA + L+ VP+ L W I + + S+ G+ +
Sbjct: 44 SMGLGSLFSDFLWKIPVVAVYTAVYELTPLRVPV-LWWTIVLMLLAQDFFYYWSHRGHHV 102

Query: 234 VPWH*LDMSHMHSGEFMLHYTNKVMVVLTSSEFAWSSQMVGIFGCCLYPCMCSPRKVMIC 55
+ L H+ +H++++ + T+ W+S F L C P + C
Sbjct: 103 I--RILWACHV------VHHSSRKFNLSTALRQPWTSVTSWPFYLPLIACGVHPAALAFC 154

Query: 54 VLSDHVWPLWCHVE 13
++ V+ W H E
Sbjct: 155 SSANLVYQFWIHTE 168


>tr|A3M0M6|A3M0M6_PICST Predicted protein OS=Pichia stipitis
GN=PICST_79777 PE=4 SV=2
Length = 598

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = -2

Query: 276 LGALFAPSYNGYSLVPWH*LDMSHMHSGEFMLHYTNKVMVVLTSSEFAWSSQMVGIFGCC 97
+G L AP + G+++ P DM H + E L YT + ++ + +G+ G
Sbjct: 392 IGILMAP-FGGHAIFPNLKTDMRHPYKFEKTLRYTYSITMI--------TDMAMGVLGFL 442

Query: 96 LYPCMCSPRKVMICVLSDHVWPLWCH 19
++ CS ++ +L +P WC+
Sbjct: 443 MFGHKCS-NEITNTLLLTSGYPAWCY 467


>tr|B4P8D2|B4P8D2_DROYA GE13666 OS=Drosophila yakuba GN=GE13666 PE=4
SV=1
Length = 98

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3

Query: 131 GLLRWLGYLDVVYILVCVLLGR**FVSYP--TMCGLCGVTWSICW 3
GL WL L V+ +L+C LL + P +CG CG+T S C+
Sbjct: 13 GLAAWLIALIVIMVLLCCLL----IICLPLLCLCGCCGLTCSACF 53


>tr|Q22YT3|Q22YT3_TETTH Cation channel family protein OS=Tetrahymena
thermophila SB210 GN=TTHERM_00122370 PE=4 SV=1
Length = 1882

Score = 32.7 bits (73), Expect = 9.2
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -3

Query: 143 VSLHGLLRWLGYLDVVYILVCVLLG 69
+S++ +R++GY V+Y L+C+L+G
Sbjct: 783 ISMYNFMRFVGYQSVIYYLICMLIG 807