BP918189 |
Clone id |
YMU001_000110_E11 |
Library |
YMU01 |
Length |
450 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_E11. |
Accession |
BP918189 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL495Contig1 |
Sequence |
ATGGGCTATGGCTCTGCAACTCTGGGCACAGCTTGTCCTGATGAGGTAAGCTCCAGCAGC AGTGCAAATAATCAGAAATGGCAAAAGAAGTTATCTAGCAGGCAGCCGCCACCACAGCAG CCAATGGAGCAATCTAGAAAAGAAAAGATAAAGAGTATTTTGCGGCTTCTTCGTGGAGTT ATTCCAGGGGGGGAGTCTACGGATACTGCATTCATTCTGGATGAAGCCATTCAGTATGTG AGGACTCTTCAGACTGAGGTGCAGAAGTTGCAAGCCAAGAAACTCATGTAGGTTTTTTGG CACCAATAGGAATAAGTAGTGTTGGGTATGTGTTAGTTTTGGTGTGGGTATAGACCTCAT CATGTGGTCTCCTACCTGTGTCCGTCTGTCTGGGGTGTTTCAGTTGGGTGTGCTTTTCAT TACTTGTACCTACGTTCCAAGCAGTCCAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ASX9 |
Definition |
sp|Q9ASX9|BH144_ARATH Transcription factor bHLH144 OS=Arabidopsis thaliana |
Align length |
88 |
Score (bit) |
58.2 |
E-value |
2.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2XJ23 |
Definition |
tr|A2XJ23|A2XJ23_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
56 |
Score (bit) |
58.5 |
E-value |
2.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918189|Adiantum capillus-veneris mRNA, clone: YMU001_000110_E11. (450 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A2XJ23|A2XJ23_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|Q75H21|Q75H21_ORYSJ Putative uncharacterized protein OSJNBa00... 57 5e-07 tr|Q10HE8|Q10HE8_ORYSJ Os03g0591300 protein OS=Oryza sativa subs... 57 5e-07 tr|A2XJ24|A2XJ24_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07 tr|Q00M80|Q00M80_SOYBN BHelix-loop-helix transcription factor OS... 56 8e-07 tr|B4FJ82|B4FJ82_MAIZE Putative uncharacterized protein OS=Zea m... 56 8e-07 tr|Q6Z861|Q6Z861_ORYSJ Os02g0315600 protein OS=Oryza sativa subs... 55 1e-06 tr|A2X405|A2X405_ORYSI Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|Q6Z9R3|Q6Z9R3_ORYSJ BHLH protein family-like (Putative unchar... 55 2e-06 tr|Q00M67|Q00M67_SOYBN Bhelix-loop-helix transcription factor OS... 55 2e-06 tr|A7NTX5|A7NTX5_VITVI Chromosome chr18 scaffold_1, whole genome... 55 2e-06 tr|A2YW50|A2YW50_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|B6UAA1|B6UAA1_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06 tr|B4G182|B4G182_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06 tr|B4FD45|B4FD45_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06 tr|A9RE75|A9RE75_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06 tr|A7QQM0|A7QQM0_VITVI Chromosome undetermined scaffold_143, who... 54 3e-06 tr|A5AUF1|A5AUF1_VITVI Putative uncharacterized protein OS=Vitis... 54 3e-06 tr|A3BNX2|A3BNX2_ORYSJ Putative uncharacterized protein OS=Oryza... 54 3e-06 tr|A2YQH4|A2YQH4_ORYSI Putative uncharacterized protein OS=Oryza... 54 3e-06 tr|B4FL37|B4FL37_MAIZE Putative uncharacterized protein OS=Zea m... 54 4e-06 tr|A9S962|A9S962_PHYPA Predicted protein (Fragment) OS=Physcomit... 54 4e-06 tr|Q67TR8|Q67TR8_ORYSJ Os09g0455300 protein OS=Oryza sativa subs... 53 7e-06 tr|Q5ZE55|Q5ZE55_ORYSJ cDNA clone:J023099H13, full insert sequen... 53 7e-06 tr|A7PLA9|A7PLA9_VITVI Chromosome chr7 scaffold_20, whole genome... 53 7e-06 tr|A2Z200|A2Z200_ORYSI Putative uncharacterized protein OS=Oryza... 53 7e-06 tr|A2WST9|A2WST9_ORYSI Putative uncharacterized protein OS=Oryza... 53 7e-06 tr|A9NR87|A9NR87_PICSI Putative uncharacterized protein OS=Picea... 53 9e-06 tr|Q8S0N2|Q8S0N2_ORYSJ cDNA clone:001-207-E08, full insert seque... 52 1e-05 tr|B8LPI3|B8LPI3_PICSI Putative uncharacterized protein OS=Picea... 52 1e-05
>tr|A2XJ23|A2XJ23_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12438 PE=4 SV=1 Length = 263
Score = 58.5 bits (140), Expect = 2e-07 Identities = 24/56 (42%), Positives = 43/56 (76%) Frame = +1
Query: 112 PQQPMEQSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKLQAK 279 P+ + +KE++K ++R L+G+IPGG+ DT +LDEA++Y+++L+ EV+KL A+ Sbjct: 204 PEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKLGAR 259
>tr|Q75H21|Q75H21_ORYSJ Putative uncharacterized protein OSJNBa0027H16.21 OS=Oryza sativa subsp. japonica GN=OSJNBa0027H16.21 PE=4 SV=1 Length = 384
Score = 57.0 bits (136), Expect = 5e-07 Identities = 23/53 (43%), Positives = 41/53 (77%) Frame = +1
Query: 112 PQQPMEQSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKL 270 P+ + +KE++K ++R L+G+IPGG+ DT +LDEA++Y+++L+ EV+KL Sbjct: 204 PEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKL 256
>tr|Q10HE8|Q10HE8_ORYSJ Os03g0591300 protein OS=Oryza sativa subsp. japonica GN=Os03g0591300 PE=2 SV=1 Length = 263
Score = 57.0 bits (136), Expect = 5e-07 Identities = 23/53 (43%), Positives = 41/53 (77%) Frame = +1
Query: 112 PQQPMEQSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKL 270 P+ + +KE++K ++R L+G+IPGG+ DT +LDEA++Y+++L+ EV+KL Sbjct: 204 PEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKL 256
>tr|A2XJ24|A2XJ24_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12439 PE=4 SV=1 Length = 263
Score = 57.0 bits (136), Expect = 5e-07 Identities = 23/53 (43%), Positives = 41/53 (77%) Frame = +1
Query: 112 PQQPMEQSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKL 270 P+ + +KE++K ++R L+G+IPGG+ DT +LDEA++Y+++L+ EV+KL Sbjct: 204 PEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKL 256
>tr|Q00M80|Q00M80_SOYBN BHelix-loop-helix transcription factor OS=Glycine max PE=4 SV=1 Length = 264
Score = 56.2 bits (134), Expect = 8e-07 Identities = 26/54 (48%), Positives = 38/54 (70%) Frame = +1
Query: 112 PQQPMEQSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKLQ 273 PQ + R+E+I +R+L+ ++PGG DTA +LDEAI YV+ L+T+VQ LQ Sbjct: 154 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQ 207
>tr|B4FJ82|B4FJ82_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 264
Score = 56.2 bits (134), Expect = 8e-07 Identities = 22/50 (44%), Positives = 40/50 (80%) Frame = +1
Query: 130 QSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKLQAK 279 + +KE++K ++R L+G+IPGG+ DT +LDEA++Y+++L+ EV+K A+ Sbjct: 211 EKKKERMKKMVRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKAGAR 260
>tr|Q6Z861|Q6Z861_ORYSJ Os02g0315600 protein OS=Oryza sativa subsp. japonica GN=P0572D06.2 PE=2 SV=1 Length = 254
Score = 55.5 bits (132), Expect = 1e-06 Identities = 22/45 (48%), Positives = 37/45 (82%) Frame = +1
Query: 136 RKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKL 270 +KE++K ++R L+G+IPGG DT +LDEA++Y+++L+ EV+KL Sbjct: 203 KKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVRYLKSLKVEVKKL 247
>tr|A2X405|A2X405_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06938 PE=4 SV=1 Length = 254
Score = 55.5 bits (132), Expect = 1e-06 Identities = 22/45 (48%), Positives = 37/45 (82%) Frame = +1
Query: 136 RKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKL 270 +KE++K ++R L+G+IPGG DT +LDEA++Y+++L+ EV+KL Sbjct: 203 KKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVRYLKSLKVEVKKL 247
>tr|Q6Z9R3|Q6Z9R3_ORYSJ BHLH protein family-like (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0461F06.33 PE=4 SV=1 Length = 246
Score = 55.1 bits (131), Expect = 2e-06 Identities = 25/54 (46%), Positives = 38/54 (70%) Frame = +1
Query: 112 PQQPMEQSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKLQ 273 PQ + R+E+I +R+L+ ++PGG DTA +LDEAI YV+ L+T+VQ L+ Sbjct: 161 PQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>tr|Q00M67|Q00M67_SOYBN Bhelix-loop-helix transcription factor OS=Glycine max PE=4 SV=1 Length = 258
Score = 55.1 bits (131), Expect = 2e-06 Identities = 25/54 (46%), Positives = 38/54 (70%) Frame = +1
Query: 112 PQQPMEQSRKEKIKSILRLLRGVIPGGESTDTAFILDEAIQYVRTLQTEVQKLQ 273 PQ + R+E+I +R+L+ ++PGG DTA +LDEAI YV+ L+T+VQ L+ Sbjct: 157 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 210
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