BP918125 [AcEST]

BP918125
Clone id	YMU001_000109_H02
Library	YMU01
Length	295
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000109_H02.
Accession	BP918125
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	CATTTGGGATATCCTATTGGCTGGCAAGTCATTGGCACGCAGCAGATTGATTGAGTTATG CATCGCCTCAATATCAAACTCCAATATTAGAAATTGTGTACTTGGCCACTACATGTCACA CTCCGCATTGTACAGAGCATCATGATGGCATATATTCAGTTCTATTTGCCCTTGTTGCAC TAGCCCCAACACCGACTTACCTCTCTTCAGTTGTCTATATTATCGTATGTGTGTACGTGG GTGCCCATATAATAAAATAGTACATCCTACCGCTTGTAGGGCTATCTTTGAAGTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q83RN5
Definition	sp\|Q83RN5\|NARH_SHIFL Respiratory nitrate reductase 1 beta chain OS=Shigella flexneri
Align length	16
Score (bit)	29.6
E-value	5.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918125\|Adiantum capillus-veneris mRNA, clone: YMU001_000109_H02. (295 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q83RN5\|NARH_SHIFL Respiratory nitrate reductase 1 beta chain ... 30 5.0 sp\|P11349\|NARH_ECOLI Respiratory nitrate reductase 1 beta chain ... 30 5.0 sp\|P12394\|CP17A_CHICK Cytochrome P450 17A1 OS=Gallus gallus GN=C... 29 8.5 >sp\|Q83RN5\|NARH_SHIFL Respiratory nitrate reductase 1 beta chain OS=Shigella flexneri GN=narH PE=3 SV=1 Length = 512 Score = 29.6 bits (65), Expect = 5.0 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 212 CLYYRMCVRGCPYNKI 259 C +RMC+ GCPY KI Sbjct: 217 CRGWRMCITGCPYKKI 232 >sp\|P11349\|NARH_ECOLI Respiratory nitrate reductase 1 beta chain OS=Escherichia coli (strain K12) GN=narH PE=1 SV=3 Length = 512 Score = 29.6 bits (65), Expect = 5.0 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 212 CLYYRMCVRGCPYNKI 259 C +RMC+ GCPY KI Sbjct: 217 CRGWRMCITGCPYKKI 232 >sp\|P12394\|CP17A_CHICK Cytochrome P450 17A1 OS=Gallus gallus GN=CYP17A1 PE=2 SV=1 Length = 508 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 282 ALQAVGCTILLYGHPRTHIR*YRQLKRGKSVLGL 181 AL VG + L GHP+ H+R +R R S+ GL Sbjct: 38 ALPLVGSLLQLAGHPQLHLRLWRLQGRYGSLYGL 71
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A8P0M1
Definition	tr\|A8P0M1\|A8P0M1_BRUMA Hypotetical protein, conserved OS=Brugia malayi
Align length	59
Score (bit)	32.7
E-value	9.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918125\|Adiantum capillus-veneris mRNA, clone: YMU001_000109_H02. (295 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A8P0M1\|A8P0M1_BRUMA Hypotetical protein, conserved OS=Brugia ... 33 9.2 >tr\|A8P0M1\|A8P0M1_BRUMA Hypotetical protein, conserved OS=Brugia malayi GN=Bm1_13535 PE=4 SV=1 Length = 271 Score = 32.7 bits (73), Expect = 9.2 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = +2 Query: 56 LCIASISNSNIRNCVLGHYMSHSALYRAS*WHIFSSICPCCTSPNTDLPLFSCLYYRMC 232 +C ++ SN+ + GH ++ + R W S CP C + +T + + LY+ C Sbjct: 8 ICTQNLCLSNVSSLPCGHTFHYNCIRR---WLAQSQQCPTCRAASTPMNIVKRLYFANC 63