BP918043 |
Clone id |
YMU001_000109_A02 |
Library |
YMU01 |
Length |
493 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000109_A02. |
Accession |
BP918043 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3885Contig1 |
Sequence |
AATTCGCGGCCGCAAATCTTCCAGTTTTTTTTTGAGAAGGTTGATAAACAACAATGAAAT AATTGATTGATTAGTGCCCAATATACAGTTAGCTTTTGATTTCTAATAATTTCTACAAAA ATGGTAAGATCTGCAAAAGATCAAAGCTCTCAACATTTTCCCCGCAGTACAATAGGACCA ATCCAAGTACTAAACATATTGCTTAAAGCTAGTAGAACATCTCCTGAACCATGTTCACAG CTGATCAAGCTTGCAAGGAGAGGAAAGAATTGTTTTAAGTATTTTTCAACAGTGTCATCT TTTAGCCCGCTGATCGCTTGCAAAGTAGCCACGACCAAAGGACCTCGAGATGCTAATTCT CGTCTCCTTGAAGAACCTATTGGGATTTTCCAACCACTTCCAGTTGCAGGCTGTTCTGTT AGATGCAGACTATGATAAGGACCTGCTGTAGCCGTGTTTAAATACACCTGTAGAACCTCT TCACAAAGCTCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UT02 |
Definition |
sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizosaccharomyces pombe |
Align length |
68 |
Score (bit) |
33.5 |
E-value |
0.49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RIC5 |
Definition |
tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
110 |
Score (bit) |
136.0 |
E-value |
6.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918043|Adiantum capillus-veneris mRNA, clone: YMU001_000109_A02. (473 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella paten... 136 6e-31 tr|A9TMD6|A9TMD6_PHYPA Predicted protein OS=Physcomitrella paten... 135 1e-30 tr|Q8S565|Q8S565_ORYSA Guanine nucleotide-exchange protein GEP2 ... 132 7e-30 tr|Q10P53|Q10P53_ORYSJ Os03g0246800 protein OS=Oryza sativa subs... 132 7e-30 tr|B8AK12|B8AK12_ORYSI Putative uncharacterized protein OS=Oryza... 132 7e-30 tr|A3AG20|A3AG20_ORYSJ Putative uncharacterized protein OS=Oryza... 132 7e-30 tr|A7PYA2|A7PYA2_VITVI Chromosome chr15 scaffold_37, whole genom... 117 4e-25 tr|Q9LZX8|Q9LZX8_ARATH Guanine nucleotide exchange factor-like p... 102 1e-20 tr|Q9LPC5|Q9LPC5_ARATH F22M8.9 protein OS=Arabidopsis thaliana G... 98 2e-19 tr|A7P8T5|A7P8T5_VITVI Chromosome chr3 scaffold_8, whole genome ... 92 2e-17 tr|A5BCF2|A5BCF2_VITVI Putative uncharacterized protein OS=Vitis... 92 2e-17 tr|Q7F8R6|Q7F8R6_ORYSJ Putative guanine nucleotide-exchange prot... 79 1e-13 tr|Q0E352|Q0E352_ORYSJ Os02g0193800 protein (Fragment) OS=Oryza ... 79 1e-13 tr|B8AJA2|B8AJA2_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|B7F1A4|B7F1A4_ORYSJ cDNA clone:002-143-A05, full insert seque... 79 1e-13 tr|A3A429|A3A429_ORYSJ Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|Q69XU9|Q69XU9_ORYSJ Putative guanine nucleotide-exchange prot... 76 7e-13 tr|Q0DAV8|Q0DAV8_ORYSJ Os06g0622800 protein (Fragment) OS=Oryza ... 76 7e-13 tr|B8B4P5|B8B4P5_ORYSI Putative uncharacterized protein OS=Oryza... 76 7e-13 tr|B7EZC9|B7EZC9_ORYSJ cDNA clone:002-103-F09, full insert seque... 76 7e-13 tr|Q9SZM0|Q9SZM0_ARATH Guanine nucleotide-exchange protein-like"... 75 1e-12 tr|Q0WUF1|Q0WUF1_ARATH Guanine nucleotide-exchange protein-like ... 75 1e-12 tr|O65490|O65490_ARATH Putative uncharacterized protein AT4g3538... 64 4e-09 tr|A3BDN8|A3BDN8_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|A8J189|A8J189_CHLRE SEC7/BIG-like ARF-guanine nucleotide exch... 52 1e-05 tr|A7PDN2|A7PDN2_VITVI Chromosome chr11 scaffold_13, whole genom... 43 0.007 tr|A5AI73|A5AI73_VITVI Putative uncharacterized protein OS=Vitis... 43 0.007 tr|Q7F2A7|Q7F2A7_ORYSJ Os07g0564700 protein OS=Oryza sativa subs... 42 0.015 tr|A3BL75|A3BL75_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.015 tr|A2XXG5|A2XXG5_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.015
>tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175154 PE=4 SV=1 Length = 1755
Score = 136 bits (342), Expect = 6e-31 Identities = 69/110 (62%), Positives = 85/110 (77%) Frame = -3
Query: 471 ELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAI 292 ELCEEVLQ+Y++ +T+ T+ W IP+GS+RRREL SR PLVVATLQA+ Sbjct: 1653 ELCEEVLQLYISISTS--------TDDSIQKPKWVIPLGSARRRELVSRAPLVVATLQAV 1704
Query: 291 SGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 SGLKD + E+YL +FFPLLA LISCEHGSG+V LALS+MFS WIGPI+L+ Sbjct: 1705 SGLKDASFEQYLVRFFPLLAGLISCEHGSGEVQLALSDMFSNWIGPILLQ 1754
>tr|A9TMD6|A9TMD6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223615 PE=4 SV=1 Length = 1749
Score = 135 bits (340), Expect = 1e-30 Identities = 68/112 (60%), Positives = 86/112 (76%) Frame = -3
Query: 471 ELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAI 292 ELCEEVL++Y+ +T+ T++ W +P+GSSRRREL SR PLVVATLQA+ Sbjct: 1645 ELCEEVLRLYIAISTS--------TDESIQKPRWVVPLGSSRRRELVSRAPLVVATLQAV 1696
Query: 291 SGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLRGK 136 SGLKD + E+YL +FFPLLA LISCEHGSG+V LALS+MFS WIGPI+L+ + Sbjct: 1697 SGLKDASFEQYLVRFFPLLAGLISCEHGSGEVQLALSDMFSNWIGPILLQAQ 1748
>tr|Q8S565|Q8S565_ORYSA Guanine nucleotide-exchange protein GEP2 OS=Oryza sativa GN=GEP2 PE=2 SV=1 Length = 1789
Score = 132 bits (333), Expect = 7e-30 Identities = 68/109 (62%), Positives = 83/109 (76%) Frame = -3
Query: 468 LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289 LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+TLQAIS Sbjct: 1684 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1738
Query: 288 GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1739 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787
>tr|Q10P53|Q10P53_ORYSJ Os03g0246800 protein OS=Oryza sativa subsp. japonica GN=Os03g0246800 PE=4 SV=1 Length = 1789
Score = 132 bits (333), Expect = 7e-30 Identities = 68/109 (62%), Positives = 83/109 (76%) Frame = -3
Query: 468 LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289 LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+TLQAIS Sbjct: 1684 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1738
Query: 288 GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1739 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787
>tr|B8AK12|B8AK12_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10738 PE=4 SV=1 Length = 1789
Score = 132 bits (333), Expect = 7e-30 Identities = 68/109 (62%), Positives = 83/109 (76%) Frame = -3
Query: 468 LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289 LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+TLQAIS Sbjct: 1684 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1738
Query: 288 GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1739 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787
>tr|A3AG20|A3AG20_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009742 PE=4 SV=1 Length = 1803
Score = 132 bits (333), Expect = 7e-30 Identities = 68/109 (62%), Positives = 83/109 (76%) Frame = -3
Query: 468 LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289 LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+TLQAIS Sbjct: 1698 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1752
Query: 288 GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1753 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1801
>tr|A7PYA2|A7PYA2_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026361001 PE=4 SV=1 Length = 1653
Score = 117 bits (292), Expect = 4e-25 Identities = 60/110 (54%), Positives = 76/110 (69%) Frame = -3
Query: 471 ELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAI 292 +LC EVLQ Y+ TA +G L QP W IP+GS +RRELA+R PLVV TLQA+ Sbjct: 1546 DLCHEVLQFYVETARSGQIPESSLGVQPR----WLIPLGSGKRRELATRAPLVVVTLQAV 1601
Query: 291 SGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 GL D + E+ L QFFPLL+SLI CEHGS +V +ALS M + +GP++LR Sbjct: 1602 CGLGDTSFERNLAQFFPLLSSLIGCEHGSNEVQVALSEMLRSSVGPVLLR 1651
>tr|Q9LZX8|Q9LZX8_ARATH Guanine nucleotide exchange factor-like protein OS=Arabidopsis thaliana GN=T4C21_270 PE=4 SV=1 Length = 1793
Score = 102 bits (254), Expect = 1e-20 Identities = 51/109 (46%), Positives = 75/109 (68%) Frame = -3
Query: 468 LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289 +C+EVL Y+ T+++ L A+ W+IP+GS +RREL++R PL+VATLQA+ Sbjct: 1685 ICQEVLNFYIETSSSAK--KLQSESSRASEYRWRIPLGSGKRRELSARAPLIVATLQAMC 1742
Query: 288 GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 L + + EK LK FPLLA+LISCEHGS +V AL++M +GP++L+ Sbjct: 1743 TLDEASFEKNLKCLFPLLANLISCEHGSNEVQTALADMLGLSVGPVLLQ 1791
>tr|Q9LPC5|Q9LPC5_ARATH F22M8.9 protein OS=Arabidopsis thaliana GN=At1g01960 PE=4 SV=1 Length = 1750
Score = 97.8 bits (242), Expect = 2e-19 Identities = 49/112 (43%), Positives = 72/112 (64%) Frame = -3
Query: 468 LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289 LC EVL+ Y+N + + EQ S W +P GS +++EL +R PLVVA +Q + Sbjct: 1650 LCREVLEFYINISCS--------KEQ---SSRWAVPSGSGKKKELTARAPLVVAAIQTLG 1698
Query: 288 GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLRGKC 133 + + +K L + FPL+A+LISCEHGSG+V +ALS+M T +GP++LR C Sbjct: 1699 NMGESLFKKNLPELFPLIATLISCEHGSGEVQVALSDMLQTSMGPVLLRSCC 1750
>tr|A7P8T5|A7P8T5_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036299001 PE=4 SV=1 Length = 1642
Score = 91.7 bits (226), Expect = 2e-17 Identities = 47/109 (43%), Positives = 68/109 (62%) Frame = -3
Query: 468 LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289 +CE++LQ+YLN A + QP W +P+GS+++ ELA+R L V+ LQ + Sbjct: 1536 VCEKILQIYLNCAGLQNAPQKQ-SSQPVLH--WILPLGSAQKDELAARTSLAVSALQVLG 1592
Query: 288 GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142 GL D+ KY+ QFFPLL L+ EH SGD+ LS MF + IGPI+++ Sbjct: 1593 GLGTDSFRKYISQFFPLLVDLVRSEHSSGDIQRVLSYMFQSCIGPIIMK 1641
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