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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918016
Clone id YMU001_000108_F04
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000108_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAGAGGGCTTTTGGTATGTTAAAAGCTCGTTTTTGCATTCTTATGAAGCGTTGCGACATG
GAACTCCGCAATATGCCATCTCTTGTTGTGGCATGTATGGTCCTGCATAACATATGCTTG
GTGCACAAAGACCAGTTCAACATGGAATGGATTAGGGATGCAGAGCTGGAGGTTCAAAGA
TTTTCACGTAGAGAACAAGGCCGTATGTCAACATCAGTTTTGAGTGAGTTGCAAGCTATT
AGGCCACAAACTGAGGATCAAGTAGTAGCACGTGGACAAAATGATGGAGGTTATAGTATT
GAGGTAGAAGAGGATGACGATGATTGTGAGAACAATGCACATCACTTGGGCTACAAAGCT
GCCAAGCGCGACAATTTGGCAAGGGCAATGTACAAAGAGCACACACGATGAAATGTCCAA
TTTGTATTTGGAAC
■■Homology search results ■■ -
sp_hit_id Q7TN73
Definition sp|Q7TN73|CASD1_MOUSE CAS1 domain-containing protein 1 OS=Mus musculus
Align length 59
Score (bit) 31.2
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918016|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_F04.
         (434 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7TN73|CASD1_MOUSE CAS1 domain-containing protein 1 OS=Mus mu...    31   1.9  
sp|A7TZG3|SKIT9_MOUSE Selection and upkeep of intraepithelial T-...    30   3.3  
sp|Q9NYW0|T2R10_HUMAN Taste receptor type 2 member 10 OS=Homo sa...    30   4.3  
sp|Q645Z4|T2R10_GORGO Taste receptor type 2 member 10 OS=Gorilla...    30   4.3  
sp|Q9VAZ3|OR98A_DROME Putative odorant receptor 98a OS=Drosophil...    30   4.3  
sp|Q96PB1|CASD1_HUMAN CAS1 domain-containing protein 1 OS=Homo s...    30   4.3  

>sp|Q7TN73|CASD1_MOUSE CAS1 domain-containing protein 1 OS=Mus
           musculus GN=Casd1 PE=2 SV=1
          Length = 797

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -3

Query: 393 VHCPCQIVALGSFVAQVMCIVLTIIVILFYLNTITSIILSTCYYLILSLWPNSLQLTQN 217
           +H  CQ++   +F+  V+CIV+      +Y   + ++      Y+ L+LWP   Q   N
Sbjct: 487 IHRVCQVLFRLNFLVVVLCIVMDRPYQFYYFVPLVTVWFMV-IYVTLALWPQITQKKAN 544


>sp|A7TZG3|SKIT9_MOUSE Selection and upkeep of intraepithelial
           T-cells protein 9 OS=Mus musculus GN=Skint9 PE=2 SV=1
          Length = 319

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -3

Query: 342 MCIVLTIIVILFYLNTITSIILSTCYYLILSLWPNSLQLT 223
           +CI+LT+I++LF    +  +    CY  + SL P S++L+
Sbjct: 229 ICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELS 268


>sp|Q9NYW0|T2R10_HUMAN Taste receptor type 2 member 10 OS=Homo
           sapiens GN=TAS2R10 PE=1 SV=2
          Length = 307

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -3

Query: 336 IVLTIIVILFYLNTITSIILSTCYYLILSLWPNSLQLTQN 217
           I+L + VI F+     ++ L TC +LI+SLW ++ Q+  N
Sbjct: 176 ILLNLGVIFFF-----TLSLITCIFLIISLWRHNRQMQSN 210


>sp|Q645Z4|T2R10_GORGO Taste receptor type 2 member 10 OS=Gorilla
           gorilla gorilla GN=TAS2R10 PE=3 SV=1
          Length = 307

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -3

Query: 336 IVLTIIVILFYLNTITSIILSTCYYLILSLWPNSLQLTQN 217
           I+L + VI F+     ++ L TC +LI+SLW ++ Q+  N
Sbjct: 176 ILLNLGVIFFF-----TLSLITCVFLIISLWRHNRQMQSN 210


>sp|Q9VAZ3|OR98A_DROME Putative odorant receptor 98a OS=Drosophila
           melanogaster GN=Or98a PE=3 SV=2
          Length = 397

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 59  WNSAICHLLLWHVWSCITYAWC 124
           W++   H +++++ SC+ +AWC
Sbjct: 33  WHTPATHKIIYYITSCLIFAWC 54


>sp|Q96PB1|CASD1_HUMAN CAS1 domain-containing protein 1 OS=Homo
           sapiens GN=CASD1 PE=2 SV=1
          Length = 797

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 381 CQIVALGSFVAQVMCIVLTIIVILFYLNTITSIILSTCYYLILSLWPNSLQLTQN 217
           CQ++   +F+  V+CIV+      +Y   + ++      Y+ L+LWP  +Q   N
Sbjct: 491 CQVLFRLNFLVVVLCIVMDRPYQFYYFVPLVTVWFMV-IYVTLALWPQIIQKKAN 544
tr_hit_id B7PBA9
Definition tr|B7PBA9|B7PBA9_IXOSC Transposase, putative OS=Ixodes scapularis
Align length 76
Score (bit) 59.7
E-value 7.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918016|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_F04.
         (434 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7PBA9|B7PBA9_IXOSC Transposase, putative OS=Ixodes scapulari...    60   7e-08
tr|A7P4N6|A7P4N6_VITVI Chromosome chr4 scaffold_6, whole genome ...    50   6e-05
tr|B3G4K0|B3G4K0_9BILA PIF/Harbinger-like protein OS=Adineta vag...    50   6e-05
tr|B7QE74|B7QE74_IXOSC Transposase, putative OS=Ixodes scapulari...    50   7e-05
tr|Q9LYH2|Q9LYH2_ARATH Putative uncharacterized protein F14F18_1...    49   2e-04
tr|Q16LI6|Q16LI6_AEDAE Putative uncharacterized protein OS=Aedes...    46   8e-04
tr|B6D1Q6|B6D1Q6_SOLLC Salt responsive protein 2 OS=Solanum lyco...    45   0.001
tr|Q8LJ71|Q8LJ71_ORYSJ Putative uncharacterized protein B1097D05...    45   0.002
tr|B8AAR5|B8AAR5_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|B4F975|B4F975_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|A2ZUR7|A2ZUR7_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.002
tr|Q9SZQ1|Q9SZQ1_ARATH Putative uncharacterized protein F27B13.2...    45   0.002
tr|Q8LCT9|Q8LCT9_ARATH Putative uncharacterized protein OS=Arabi...    45   0.002
tr|Q84J48|Q84J48_ARATH Putative uncharacterized protein At4g2978...    45   0.002
tr|Q4RMQ5|Q4RMQ5_TETNG Chromosome 10 SCAF15019, whole genome sho...    44   0.003
tr|B7P7Y6|B7P7Y6_IXOSC Putative uncharacterized protein OS=Ixode...    44   0.003
tr|Q6L4R6|Q6L4R6_ORYSJ Os05g0593000 protein OS=Oryza sativa subs...    44   0.004
tr|B8AXG8|B8AXG8_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.004
tr|A3B7E4|A3B7E4_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.004
tr|B6SVG3|B6SVG3_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.009
tr|A7PE37|A7PE37_VITVI Chromosome chr11 scaffold_13, whole genom...    43   0.009
tr|Q5TVA5|Q5TVA5_ANOGA AGAP003812-PA OS=Anopheles gambiae GN=AGA...    42   0.012
tr|B7PSC7|B7PSC7_IXOSC Transposase, putative (Fragment) OS=Ixode...    42   0.012
tr|B6SGX9|B6SGX9_MAIZE Transposon protein CACTA, En/Spm sub-clas...    41   0.026
tr|Q5SNE7|Q5SNE7_ORYSJ Putative uncharacterized protein P0512G09...    40   0.045
tr|B7EXU7|B7EXU7_ORYSJ cDNA clone:001-117-G12, full insert seque...    40   0.045
tr|A5AHZ5|A5AHZ5_VITVI Putative uncharacterized protein OS=Vitis...    40   0.045
tr|A2ZQ45|A2ZQ45_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.045
tr|Q8LMQ4|Q8LMQ4_ORYSJ Putative uncharacterized protein OSJNBa00...    39   0.099
tr|Q7X8Y7|Q7X8Y7_ORYSJ OSJNBa0085H03.2 protein OS=Oryza sativa s...    39   0.099

>tr|B7PBA9|B7PBA9_IXOSC Transposase, putative OS=Ixodes scapularis
           GN=IscW_ISCW016638 PE=4 SV=1
          Length = 212

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = +1

Query: 1   ERAFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNMEWIRDAELEVQR 180
           E AFG LKARF I++KR ++ + N+ ++V AC +LHN+C    D  + +WI+DA  +V+ 
Sbjct: 109 ENAFGRLKARFRIVLKRVEVRIDNVNAVVRACCILHNVCETLNDSADKQWIQDAR-KVEE 167

Query: 181 FSRREQGRMSTSVLSE 228
             + EQ    T   ++
Sbjct: 168 DDKLEQPSRKTKAKTD 183


>tr|A7P4N6|A7P4N6_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032220001
           PE=4 SV=1
          Length = 484

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 21/47 (44%), Positives = 34/47 (72%)
 Frame = +1

Query: 7   AFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNME 147
           AF  LKAR+C L KR +++L+++P ++ AC VLHNIC +  ++ + E
Sbjct: 395 AFARLKARWCCLQKRTEVKLQDLPVVLGACCVLHNICELQNEEMDPE 441


>tr|B3G4K0|B3G4K0_9BILA PIF/Harbinger-like protein OS=Adineta vaga
           PE=4 SV=1
          Length = 411

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 21/50 (42%), Positives = 33/50 (66%)
 Frame = +1

Query: 1   ERAFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNMEW 150
           ER FG LK RF +L K+ +  L N+ ++V A  +LHN+C+++ D   +EW
Sbjct: 327 ERTFGALKNRFRLLHKKIEYNLSNITNMVKAATILHNLCILNGDNDEIEW 376


>tr|B7QE74|B7QE74_IXOSC Transposase, putative OS=Ixodes scapularis
           GN=IscW_ISCW012658 PE=4 SV=1
          Length = 413

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 23/51 (45%), Positives = 33/51 (64%)
 Frame = +1

Query: 1   ERAFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNMEWI 153
           E AFG LKARF IL K  ++++ ++ ++V AC VLHNIC    D+    W+
Sbjct: 336 ENAFGRLKARFRILHKGLELDIESVNTIVRACCVLHNICEQLNDRCEKNWL 386


>tr|Q9LYH2|Q9LYH2_ARATH Putative uncharacterized protein F14F18_180
           (At5g12010/F14F18_180) OS=Arabidopsis thaliana
           GN=F14F18_180 PE=2 SV=1
          Length = 502

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/49 (40%), Positives = 35/49 (71%)
 Frame = +1

Query: 1   ERAFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNME 147
           + AFG LK R+  L KR +++L+++P+++ AC VLHNIC + +++   E
Sbjct: 411 KEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMREEKMEPE 459


>tr|Q16LI6|Q16LI6_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL012638 PE=4 SV=1
          Length = 119

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 27/76 (35%), Positives = 40/76 (52%)
 Frame = +1

Query: 1   ERAFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNMEWIRDAELEVQR 180
           E AFG LKARF  + K  D ++ N   ++ AC VLHN      D+ + +W+   E   Q 
Sbjct: 30  ENAFGHLKARFRRIGKGIDNDIGNASVIIKACCVLHNFLNERNDEVSKKWLAAQE---QI 86

Query: 181 FSRREQGRMSTSVLSE 228
            S+REQ   +  + S+
Sbjct: 87  DSKREQPNQAVFISSK 102


>tr|B6D1Q6|B6D1Q6_SOLLC Salt responsive protein 2 OS=Solanum
           lycopersicum GN=SlSRG2 PE=2 SV=1
          Length = 499

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 20/47 (42%), Positives = 33/47 (70%)
 Frame = +1

Query: 1   ERAFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFN 141
           + AF  +KAR+  L KR +++L+++P ++ AC VLHNIC +  +Q N
Sbjct: 408 KEAFMRMKARWSCLRKRTEVKLQDLPVVLGACCVLHNICEMRGEQLN 454


>tr|Q8LJ71|Q8LJ71_ORYSJ Putative uncharacterized protein B1097D05.32
           (Os01g0582600 protein) OS=Oryza sativa subsp. japonica
           GN=B1097D05.32 PE=4 SV=1
          Length = 551

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = +1

Query: 7   AFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNME 147
           AF  LKAR+  L KR +++L+++P ++ AC VLHNIC    ++   E
Sbjct: 462 AFARLKARWACLQKRTEVKLQDLPVVLGACCVLHNICETRGEELEPE 508


>tr|B8AAR5|B8AAR5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02577 PE=4 SV=1
          Length = 299

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = +1

Query: 7   AFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQFNME 147
           AF  LKAR+  L KR +++L+++P ++ AC VLHNIC    ++   E
Sbjct: 210 AFARLKARWACLQKRTEVKLQDLPVVLGACCVLHNICETRGEELEPE 256


>tr|B4F975|B4F975_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 568

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 19/43 (44%), Positives = 31/43 (72%)
 Frame = +1

Query: 7   AFGMLKARFCILMKRCDMELRNMPSLVVACMVLHNICLVHKDQ 135
           AF  LKAR+  L KR +++L+++P ++ AC VLHNIC +  ++
Sbjct: 479 AFARLKARWACLQKRTEVKLQDLPVVLGACCVLHNICEIRGEE 521