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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918015
Clone id YMU001_000108_F03
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000108_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACAATGTCTTGCCTCCAGCAGAGTGTGTGGGGATTTTGGATTGTGTGGTCACTTCGAGCT
CTTTTGCTTCACGAGTTCAAAGGCTTAGCGCAAAGGAATCTGTCAAACCCTAAAGTCTTT
TATCTAGGCAACTTTGTTTAGTGCCTGACGAGGGGTTTGCGGCGGTGTTGAAGCTTGGTT
AGTGCTAACATAAGCTGGAGCTATTTGTTGCTCAATTGTCAGTGACTGTACTATATGTAC
ATAAACATGATATCAATTGCAAATGAGTGAAAAAGTCCCCTTCTTTACAAGGCTATAAAG
AGGGATAGCGCATCCTCTTAAGAGCGGATGACCTGCTGAAATGAGTTCATATTGAACTCC
AAGCCCACAAGGTGCTTCCTGCCTTCTATACGAGGCTGTAAGAATAGCTTTGTAAGGTGC
TAGCTGCCTTCCTTCTC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918015|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_F03.
         (437 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A7V0Y5
Definition tr|A7V0Y5|A7V0Y5_BACUN Putative uncharacterized protein OS=Bacteroides uniformis ATCC 8492
Align length 50
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918015|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_F03.
         (437 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7V0Y5|A7V0Y5_BACUN Putative uncharacterized protein OS=Bacte...    34   4.1  
tr|B7AHM6|B7AHM6_9BACE Putative uncharacterized protein OS=Bacte...    33   5.4  

>tr|A7V0Y5|A7V0Y5_BACUN Putative uncharacterized protein
           OS=Bacteroides uniformis ATCC 8492 GN=BACUNI_01221 PE=4
           SV=1
          Length = 194

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
 Frame = -3

Query: 423 LAPYKAILTA-SYRRQEAPCGLGVQYEL-----ISAGHP-LLRGCAIPLY 295
           L  YK IL + S RR+E   GLGV+YE+     +   +P  LRG  IPLY
Sbjct: 6   LKKYKVILASNSPRRKELLAGLGVEYEVRTLPDVDESYPETLRGADIPLY 55


>tr|B7AHM6|B7AHM6_9BACE Putative uncharacterized protein
           OS=Bacteroides eggerthii DSM 20697 GN=BACEGG_01909 PE=4
           SV=1
          Length = 200

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
 Frame = -3

Query: 423 LAPYKAILTA-SYRRQEAPCGLGVQYEL-----ISAGHP-LLRGCAIPLYSLVKK 280
           L  YK IL + S RR+E   GLGV YE+     +   +P  LRG  IPLY   +K
Sbjct: 5   LKKYKVILASNSPRRKELLSGLGVDYEIRTLPDVDESYPDTLRGADIPLYIAKEK 59