BP917937 |
Clone id |
YMU001_000107_E10 |
Library |
YMU01 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000107_E10. |
Accession |
BP917937 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4122Contig1 |
Sequence |
AGGAGCCGCAGGCCAACAAGAAGGAGCTGGCCCCGATTTTCCTGACGCACAATCTCTGCT TCTCTAATCCTTGCCATTCTCTCTGCCAACTGGCCAGCTTGACCCATGTAGAGCTTCATA CTCGCTTTTCTCCTTACAACCTCCGCAAGACATGCTCTGTATGCTGGACCAATCTGCCTG ACAAGCTTCAAATCCTTAAATACCTCCTCTTGGCGGGACAATGCTTCTCTGAAAGCTGCC AGCTGATTGCGGACATCACGGATGCTTGACTGCAGAGCTGCAACCCTCTGCATACAAGTA TGCACACAGCAACCCATTTCATGCTTTTTAGCAACAAAACTCTCCAGAAGTTTCTCTATC CTTTGATAGCAATGGTCCATCTTGGGAAGGCGGCTATTTACATGCACATGATACATTGGT CCCAAAGCAGACACTGCATCATGCGGTCTCATTGACATAGACAAGCTGCTGGTTACACAA TCATCAACCAACTTCTTCACAGTATTCATGTCCTTACTAAGAGACTGCATTATGGTTTTC TCCTCATCCACAACACTTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8TDY2 |
Definition |
sp|Q8TDY2|RBCC1_HUMAN RB1-inducible coiled-coil protein 1 OS=Homo sapiens |
Align length |
177 |
Score (bit) |
37.7 |
E-value |
0.039 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TRX9 |
Definition |
tr|A9TRX9|A9TRX9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
170 |
Score (bit) |
225.0 |
E-value |
1.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917937|Adiantum capillus-veneris mRNA, clone: YMU001_000107_E10. (560 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TRX9|A9TRX9_PHYPA Predicted protein (Fragment) OS=Physcomit... 225 1e-57 tr|A9SER7|A9SER7_PHYPA Predicted protein (Fragment) OS=Physcomit... 223 7e-57 tr|Q9SUG7|Q9SUG7_ARATH Putative uncharacterized protein T10C21.1... 214 3e-54 tr|A5BAS0|A5BAS0_VITVI Putative uncharacterized protein OS=Vitis... 213 7e-54 tr|A7PFL5|A7PFL5_VITVI Chromosome chr11 scaffold_14, whole genom... 210 5e-53 tr|A2X1L8|A2X1L8_ORYSI Putative uncharacterized protein OS=Oryza... 180 4e-44 tr|Q6ETK7|Q6ETK7_ORYSJ Os02g0179800 protein OS=Oryza sativa subs... 180 5e-44 tr|A3A3S8|A3A3S8_ORYSJ Putative uncharacterized protein OS=Oryza... 180 5e-44 tr|A8J9G0|A8J9G0_CHLRE Predicted protein OS=Chlamydomonas reinha... 76 1e-12 tr|B4JGX8|B4JGX8_DROGR GH19504 OS=Drosophila grimshawi GN=GH1950... 48 3e-04 tr|B4NLC7|B4NLC7_DROWI GK13205 OS=Drosophila willistoni GN=GK132... 47 7e-04 tr|B4QX05|B4QX05_DROSI GD19810 OS=Drosophila simulans GN=GD19810... 47 0.001 tr|B4I457|B4I457_DROSE GM10831 OS=Drosophila sechellia GN=GM1083... 47 0.001 tr|A8Q299|A8Q299_MALGO Putative uncharacterized protein OS=Malas... 47 0.001 tr|Q6IDE5|Q6IDE5_DROME LD09358p OS=Drosophila melanogaster PE=2 ... 46 0.002 tr|B5Y5S6|B5Y5S6_PHATR Predicted protein OS=Phaeodactylum tricor... 45 0.002 tr|Q9VNG5|Q9VNG5_DROME CG1347, isoform A OS=Drosophila melanogas... 45 0.002 tr|Q7KTS2|Q7KTS2_DROME CG1347, isoform B OS=Drosophila melanogas... 45 0.002 tr|B6IDM3|B6IDM3_DROME FI04107p OS=Drosophila melanogaster GN=CG... 45 0.002 tr|B3P2I4|B3P2I4_DROER GG12986 OS=Drosophila erecta GN=GG12986 P... 45 0.002 tr|B4PUW6|B4PUW6_DROYA GE10154 OS=Drosophila yakuba GN=GE10154 P... 45 0.003 tr|Q297M2|Q297M2_DROPS GA12308 OS=Drosophila pseudoobscura pseud... 45 0.003 tr|B4G480|B4G480_DROPE GL24513 OS=Drosophila persimilis GN=GL245... 45 0.003 tr|B4KBI0|B4KBI0_DROMO GI23775 OS=Drosophila mojavensis GN=GI237... 44 0.006 tr|Q4P972|Q4P972_USTMA Putative uncharacterized protein OS=Ustil... 44 0.006 tr|Q4CQI9|Q4CQI9_TRYCR MYH7B protein, putative OS=Trypanosoma cr... 44 0.008 tr|Q0CNP1|Q0CNP1_ASPTN Putative uncharacterized protein OS=Asper... 44 0.008 tr|B4LZ64|B4LZ64_DROVI GJ23957 OS=Drosophila virilis GN=GJ23957 ... 41 0.039 tr|B3LWF6|B3LWF6_DROAN GF16341 OS=Drosophila ananassae GN=GF1634... 41 0.039 tr|Q7PWR9|Q7PWR9_ANOGA AGAP008873-PA (Fragment) OS=Anopheles gam... 39 0.15
>tr|A9TRX9|A9TRX9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_149629 PE=4 SV=1 Length = 1130
Score = 225 bits (573), Expect = 1e-57 Identities = 111/170 (65%), Positives = 139/170 (81%) Frame = -1
Query: 548 DEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDHC 369 DE+ +I+QSLSKD+NTVKKLVDDCV S ++RPHDAVSALGPMY VH + +P+++ C Sbjct: 292 DEQASIVQSLSKDVNTVKKLVDDCVCGQYSGNLRPHDAVSALGPMYDVHDKNHIPRLEAC 351
Query: 368 YQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKDL 189 +E LLE K++M CVHT +Q VAALQS+IRD+RNQLA F+EAL RQ + F +L Sbjct: 352 DMELENLLEYCKKSKNKMNLCVHTRLQNVAALQSNIRDMRNQLAVFKEALVRQSDHFAEL 411
Query: 188 KLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 KL+R++GP+Y+ACLAEVVRRKASMKLYMGQAGQLAE++AR REAEI R+E Sbjct: 412 KLLRRVGPSYKACLAEVVRRKASMKLYMGQAGQLAEKLARKREAEIARRE 461
>tr|A9SER7|A9SER7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128679 PE=4 SV=1 Length = 1135
Score = 223 bits (567), Expect = 7e-57 Identities = 107/170 (62%), Positives = 140/170 (82%) Frame = -1
Query: 548 DEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDHC 369 +E+ +I+QSLSKD+NTVKKLVDDCV+ S ++RPHDAVSALGPMY VH + LP+++ C Sbjct: 292 EEQSSIVQSLSKDVNTVKKLVDDCVSGQYSGNLRPHDAVSALGPMYDVHDKNHLPRLEAC 351
Query: 368 YQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKDL 189 ++ LLE K++M CVHT +Q VAALQS+IR +RNQLA F+EA++RQ + F +L Sbjct: 352 DMELDNLLEHSKKSKNQMNLCVHTRLQNVAALQSNIRGMRNQLAVFKEAMARQSDHFSEL 411
Query: 188 KLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 KL+R++GP+Y+ACLAEVVRRKASMKLYMGQAGQLAE++AR REAE+ R+E Sbjct: 412 KLLRRVGPSYKACLAEVVRRKASMKLYMGQAGQLAEKLARKREAEVARRE 461
>tr|Q9SUG7|Q9SUG7_ARATH Putative uncharacterized protein T10C21.140 (Putative uncharacterized protein AT4g30790) OS=Arabidopsis thaliana GN=T10C21.140 PE=2 SV=1 Length = 1148
Score = 214 bits (545), Expect = 3e-54 Identities = 107/171 (62%), Positives = 133/171 (77%) Frame = -1
Query: 551 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDH 372 +DEEK+IMQSLSKD+NTVKKLVDDC++S +S S+RPHDAVSALGPMY VH + LPKM Sbjct: 304 IDEEKSIMQSLSKDVNTVKKLVDDCMSSQVSSSLRPHDAVSALGPMYEVHDKNHLPKMQA 363
Query: 371 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 192 CY I +LL+ KK+EM VH MQ++ + I+D + Q FREA+ RQ+++F D Sbjct: 364 CYNSISELLDFCKNKKNEMNNFVHGYMQKITYVTYIIKDAKLQFPVFREAMVRQDDLFAD 423
Query: 191 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 LKLVR +GPAYRACLAEVVRRKASMKLYMG AGQLAE++A RE E+ ++E Sbjct: 424 LKLVRGVGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLAMKRETEVRKRE 474
>tr|A5BAS0|A5BAS0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042065 PE=4 SV=1 Length = 950
Score = 213 bits (541), Expect = 7e-54 Identities = 110/171 (64%), Positives = 132/171 (77%) Frame = -1
Query: 551 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDH 372 ++E+K+IMQSLSKD++TVKKLVDD VT LS S+RPHDAVSALGPMY VH + LPKM Sbjct: 304 INEQKSIMQSLSKDVSTVKKLVDDSVTCQLSSSLRPHDAVSALGPMYDVHDKNHLPKMQA 363
Query: 371 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 192 C I KLL+ + KK+EM VH MQRV + I+D R Q F+EA++RQ+ +F D Sbjct: 364 CDHSISKLLDFCIDKKNEMNNFVHNYMQRVTYVSYIIKDTRYQFPVFKEAMARQDTLFAD 423
Query: 191 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 LKLVR IGPAYRACLAEVVRRKASMKLYMG AGQLAE++A REAE+ R+E Sbjct: 424 LKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLATKREAEVRRRE 474
>tr|A7PFL5|A7PFL5_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017147001 PE=4 SV=1 Length = 1137
Score = 210 bits (534), Expect = 5e-53 Identities = 109/171 (63%), Positives = 131/171 (76%) Frame = -1
Query: 551 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDH 372 ++E+K+IMQSLSKD++TVKKLV D VT LS S+RPHDAVSALGPMY VH + LPKM Sbjct: 304 INEQKSIMQSLSKDVSTVKKLVHDSVTCQLSSSLRPHDAVSALGPMYDVHDKNHLPKMQA 363
Query: 371 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 192 C I KLL+ + KK+EM VH MQRV + I+D R Q F+EA++RQ+ +F D Sbjct: 364 CDHSISKLLDFCIDKKNEMNNFVHNYMQRVTYVSYIIKDTRYQFPVFKEAMARQDTLFAD 423
Query: 191 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 LKLVR IGPAYRACLAEVVRRKASMKLYMG AGQLAE++A REAE+ R+E Sbjct: 424 LKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLATKREAEVRRRE 474
>tr|A2X1L8|A2X1L8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06096 PE=4 SV=1 Length = 1119
Score = 180 bits (457), Expect = 4e-44 Identities = 93/171 (54%), Positives = 120/171 (70%) Frame = -1
Query: 551 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDH 372 + ++K IMQSLSKD+ T KKLVDDC LS S+RPHDAVSA+G +Y VH LP + + Sbjct: 315 IGDQKIIMQSLSKDVTTSKKLVDDCSNCQLSASLRPHDAVSAVGRIYEVHEKDNLPSIHN 374
Query: 371 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 192 + KLLE AKK+EM VH MQRV + Q I+++ N+L AF+E + Q+++F Sbjct: 375 IDRMFTKLLEKCKAKKNEMNTLVHVSMQRVKSAQIVIKEMMNELHAFQEVMGHQDKIFDS 434
Query: 191 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 LKL +G AYRACLAEVVRRK+S KLY G AGQLAE++A REAE+ R+E Sbjct: 435 LKLASGMGHAYRACLAEVVRRKSSFKLYTGLAGQLAEKLATEREAEVRRRE 485
>tr|Q6ETK7|Q6ETK7_ORYSJ Os02g0179800 protein OS=Oryza sativa subsp. japonica GN=P0544B02.28 PE=4 SV=1 Length = 1140
Score = 180 bits (456), Expect = 5e-44 Identities = 93/171 (54%), Positives = 120/171 (70%) Frame = -1
Query: 551 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDH 372 + ++K IMQSLSKD+ T KKLVDDC LS S+RPHDAVSA+G +Y VH LP + + Sbjct: 315 IGDQKIIMQSLSKDVTTSKKLVDDCSNCQLSASLRPHDAVSAVGRIYEVHEKDNLPSVHN 374
Query: 371 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 192 + KLLE AKK+EM VH MQRV + Q I+++ N+L AF+E + Q+++F Sbjct: 375 IDRLFTKLLEKCKAKKNEMNTLVHVSMQRVKSAQIVIKEMMNELHAFQEVMGHQDKIFDS 434
Query: 191 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 LKL +G AYRACLAEVVRRK+S KLY G AGQLAE++A REAE+ R+E Sbjct: 435 LKLASGMGHAYRACLAEVVRRKSSFKLYTGLAGQLAEKLATEREAEVRRRE 485
>tr|A3A3S8|A3A3S8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005450 PE=4 SV=1 Length = 1170
Score = 180 bits (456), Expect = 5e-44 Identities = 93/171 (54%), Positives = 120/171 (70%) Frame = -1
Query: 551 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMDH 372 + ++K IMQSLSKD+ T KKLVDDC LS S+RPHDAVSA+G +Y VH LP + + Sbjct: 345 IGDQKIIMQSLSKDVTTSKKLVDDCSNCQLSASLRPHDAVSAVGRIYEVHEKDNLPSVHN 404
Query: 371 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 192 + KLLE AKK+EM VH MQRV + Q I+++ N+L AF+E + Q+++F Sbjct: 405 IDRLFTKLLEKCKAKKNEMNTLVHVSMQRVKSAQIVIKEMMNELHAFQEVMGHQDKIFDS 464
Query: 191 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQE 39 LKL +G AYRACLAEVVRRK+S KLY G AGQLAE++A REAE+ R+E Sbjct: 465 LKLASGMGHAYRACLAEVVRRKSSFKLYTGLAGQLAEKLATEREAEVRRRE 515
>tr|A8J9G0|A8J9G0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_177124 PE=4 SV=1 Length = 803
Score = 75.9 bits (185), Expect = 1e-12 Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 11/187 (5%) Frame = -1
Query: 554 VVDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMD 375 ++DE +++Q LSKD+ TV+ LV+D + ++M + LG + Sbjct: 173 LLDEHSSMVQVLSKDLRTVRALVEDVAAEASKVAM----SADVLGQL------------- 215
Query: 374 HCYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFK 195 QR++ QS IRD++N+LAAF E L+RQ+ F Sbjct: 216 ----------------------------QRISGQQSRIRDMKNKLAAFNEVLARQDAAFS 247
Query: 194 DLKLVRQI-----------GPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIV 48 +LK+V + G A ++ VV + +LY GQAG+LAE M R RE E Sbjct: 248 ELKVVHRCACGRRFAKTAGGGRLHATVSAVVTLTQTTQLYCGQAGRLAEHMTRFREKEAA 307
Query: 47 RQENRGQ 27 R+ G+ Sbjct: 308 RRAAFGK 314
>tr|B4JGX8|B4JGX8_DROGR GH19504 OS=Drosophila grimshawi GN=GH19504 PE=4 SV=1 Length = 1292
Score = 48.1 bits (113), Expect = 3e-04 Identities = 39/171 (22%), Positives = 73/171 (42%) Frame = -1
Query: 554 VVDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSRLPKMD 375 +V +++ +L ++ + L DD V L +S R S+L M Sbjct: 373 MVQDQREQATALQQNESRALNLRDDSVLPDLCLSHR-----------------SQLQVML 415
Query: 374 HCYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFK 195 + RI + K E+G +HT ++R+ +++ + + N+L + L R E Sbjct: 416 ENHLRIREYCRCIANAKDELGRNLHTRLRRIVWIENGMSEFDNRLLFYHRCLRRAERHIS 475
Query: 194 DLKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERMARIREAEIVRQ 42 ++ + + Y A + EVVRRK + A +L+ RI E+ R+ Sbjct: 476 IIEQIHRAPSTYVAAVTEVVRRKIFSDKFRLWASRLSVDFDRIHGEELQRR 526
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