BP917913 |
Clone id |
YMU001_000107_C04 |
Library |
YMU01 |
Length |
481 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000107_C04. |
Accession |
BP917913 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGACCACCAAGAGACGTCGCCTTTCTGTGATCTCTCAAAATTAATTACATCTGTGACTCT GTCTTGAATACATGTCTGCTACAAACAATTGGTAAAAGTACATAGCTCTATAAGTCCACC AATTGAGTGTCGAGTTGGGGGAAAGCCCAATCTCTGAACCTGTCTTGTTCATTAGTGCCA GTGAGAGGGCTCCAAGCTGTATAACGTGTGTGCAGAGCTGATTCCAGGCAATTCTGAATC CTTACTGCAATTTGAACTATCTTTAAGATGAAAAGTATTCGGTACTCTGATCTTTGTGAT GTTCCTCCCTGTCTTTTCATGGTTCGGTATGGGACCAGTATCTTTTCAAGGGCATTCCTT GCGAGCAAGAAGCTGCATTTCGTCCACCTTCTCAGCATCCTCCCCAAGAACCTTCTTTTC TAAGCCATCATTTACACTTTTGTAAGTCCATGTATCTGGATCAAAACCTAACTCCAACAT T |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LFF1 |
Definition |
sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana |
Align length |
43 |
Score (bit) |
37.4 |
E-value |
0.036 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0V1T3 |
Definition |
tr|B0V1T3|B0V1T3_HUMAN Olfactory receptor, family 2, subfamily J, member 3 (Fragment) OS=Homo sapiens |
Align length |
75 |
Score (bit) |
35.0 |
E-value |
1.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917913|Adiantum capillus-veneris mRNA, clone: YMU001_000107_C04. (481 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0V1T3|B0V1T3_HUMAN Olfactory receptor, family 2, subfamily J... 35 1.9 tr|B0UY52|B0UY52_HUMAN Olfactory receptor, family 2, subfamily J... 35 1.9 tr|A3LSJ8|A3LSJ8_PICST Predicted protein (Fragment) OS=Pichia st... 35 2.4 tr|A9S8X1|A9S8X1_PHYPA Predicted protein OS=Physcomitrella paten... 34 3.1 tr|A3XM88|A3XM88_9FLAO Acetyltransferase OS=Leeuwenhoekiella bla... 33 5.4 tr|Q9U0Z7|Q9U0Z7_LEIMA Hypothetical transmembrane protein L5683.... 33 5.4 tr|A5ESY1|A5ESY1_BRASB Putative methylase/helicase OS=Bradyrhizo... 33 7.0
>tr|B0V1T3|B0V1T3_HUMAN Olfactory receptor, family 2, subfamily J, member 3 (Fragment) OS=Homo sapiens GN=DAMC-365H22.2-001 PE=3 SV=1 Length = 258
Score = 35.0 bits (79), Expect = 1.9 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = -3
Query: 371 FLLARNALEKILVPYRTMKRQGGTSQRSEYRILF---ILKIVQIAVRIQNCLESALHTRY 201 F+LA E +L+ + R + Y +L ++ +A + SALH+ + Sbjct: 106 FVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHLLAVASWVSGFTNSALHSSF 165
Query: 200 TAWSPLTGTNEQDRF 156 T W PL G + D F Sbjct: 166 TFWVPLCGHRQVDHF 180
>tr|B0UY52|B0UY52_HUMAN Olfactory receptor, family 2, subfamily J, member 3 OS=Homo sapiens GN=DAAP-334J16.2-001 PE=3 SV=1 Length = 311
Score = 35.0 bits (79), Expect = 1.9 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = -3
Query: 371 FLLARNALEKILVPYRTMKRQGGTSQRSEYRILF---ILKIVQIAVRIQNCLESALHTRY 201 F+LA E +L+ + R + Y +L ++ +A + SALH+ + Sbjct: 106 FVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHLLAVASWVSGFTNSALHSSF 165
Query: 200 TAWSPLTGTNEQDRF 156 T W PL G + D F Sbjct: 166 TFWVPLCGHRQVDHF 180
>tr|A3LSJ8|A3LSJ8_PICST Predicted protein (Fragment) OS=Pichia stipitis GN=PICST_42853 PE=4 SV=2 Length = 653
Score = 34.7 bits (78), Expect = 2.4 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%) Frame = -2
Query: 465 FDPDTWTYKSVNDGL--EKKVLGEDAEKVDEMQLLARKECP*KDTGPIPNHEKTGRNITK 292 FDP+TW ++N + E+++L E ++A + I N + R ++ Sbjct: 399 FDPETWVEYNLNPLVCKERRILEESVVNSSRSTMIANSDST-FSINSIGNKLRNYRALSL 457
Query: 291 IRVPNTFHLKDSSNCSKDSELPGISSAHTLYSLE 190 R T L ++SN S + LP S++ +L+S++ Sbjct: 458 TRRSKTTSLDEASNQSSEFTLPERSTSPSLFSMK 491
>tr|A9S8X1|A9S8X1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163525 PE=4 SV=1 Length = 174
Score = 34.3 bits (77), Expect = 3.1 Identities = 30/110 (27%), Positives = 50/110 (45%) Frame = -2
Query: 462 DPDTWTYKSVNDGLEKKVLGEDAEKVDEMQLLARKECP*KDTGPIPNHEKTGRNITKIRV 283 D +T T+ + + KVLG+D +++ +L K+ P P+ H+K R+ T+ R Sbjct: 31 DHNTNTFHQMAAKEQGKVLGDDEKQISHTKLHPIKQSP----PPLHKHQKPRRS-TRFRP 85
Query: 282 PNTFHLKDSSNCSKDSELPGISSAHTLYSLEPSHWH**TRQVQRLGFPPT 133 N S+ +K S G + +HT L+P + R PPT Sbjct: 86 ANKMTENGGSSSNKTS--TGTAPSHTQPGLQPRQCE--NGKNSRYQLPPT 131
>tr|A3XM88|A3XM88_9FLAO Acetyltransferase OS=Leeuwenhoekiella blandensis MED217 GN=MED217_07986 PE=4 SV=1 Length = 180
Score = 33.5 bits (75), Expect = 5.4 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1
Query: 235 RIAWNQLCTHVIQLGALSLALMNKTGSE-IGLSPNSTLNWWTYRAMYFYQLFVADMY 68 R+ ++QL ++++ A S+ L K G E +GL + T +YR Y YQL D++ Sbjct: 124 RLEFHQLYANILEENAPSIKLFEKQGFERVGLKKDWTRVGGSYRNEYLYQLIHTDVH 180
>tr|Q9U0Z7|Q9U0Z7_LEIMA Hypothetical transmembrane protein L5683.03 OS=Leishmania major GN=L5683.03 PE=4 SV=1 Length = 409
Score = 33.5 bits (75), Expect = 5.4 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 5/38 (13%) Frame = +3
Query: 381 RPPSQHPPQEPSFLSHHLH-----FCKSMYLDQNLTPT 479 RPP+ PP P FLS HLH +C + + TPT Sbjct: 73 RPPAPPPPPPPLFLSRHLHSMPWLWCTCVKMQMYYTPT 110
>tr|A5ESY1|A5ESY1_BRASB Putative methylase/helicase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=BBta_7413 PE=4 SV=1 Length = 1444
Score = 33.1 bits (74), Expect = 7.0 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +1
Query: 289 DLCDVPPCLFMVRYGTSIFSRAFLASKKL-HFVHLLSILP 405 D C+ LF+ +YG IF +A AS L FV L+S+LP Sbjct: 73 DACEAASVLFLRKYGKPIFRKAGSASAALPQFVKLVSLLP 112
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