BP917856 |
Clone id |
YMU001_000106_D10 |
Library |
YMU01 |
Length |
497 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_D10. |
Accession |
BP917856 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2403Contig1 |
Sequence |
TCTATAATCTGGACTAAGCATGCGCCAATGTAAATCCTCCGCGAAAATACTTTACAAGAT CACTCTCTATTTCCTGAACCTGTTCCAGCCTCGGCTCTTCAAACTTTAGTTTTCGAGATA TTGATCTTTCACGCTCCTCTTTGTTTGAATTCTTCAGATTAAAGAGGGCCTGTCCCTGCA CCGCTGCATCTTGGGCCGCAACAGCAGCAGCTTGCTTTGAGATTTTAACCGGATTGCCTT TTGCTGCTGTAGCCCGAGGTATCCCGCCTCCAGATCTTGAAGCTGGGCGATCTCCAGAAC CAGTTGCGGTAGATTTGACATGTCTAGTCCCTCCCATCTTACCAAGATTGCCTTTATTTA CATTTACCGAGTCCACAAAATCAGAAGATCGCTGACGGTCTAGCATTGGCTGCACCATTG CTAAAGCGGTCCCGTGAAGATCTTTGATAGCTCGGACAGCCTGGTCTGGCCCACATGTCT TGATAAGATCCATCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q08306 |
Definition |
sp|Q08306|PPOD_SOLLC Polyphenol oxidase D, chloroplastic OS=Solanum lycopersicum |
Align length |
60 |
Score (bit) |
30.4 |
E-value |
4.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8S912 |
Definition |
tr|Q8S912|Q8S912_TOBAC Microtubule bundling polypeptide TMBP200 OS=Nicotiana tabacum |
Align length |
150 |
Score (bit) |
86.7 |
E-value |
6.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917856|Adiantum capillus-veneris mRNA, clone: YMU001_000106_D10. (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8S912|Q8S912_TOBAC Microtubule bundling polypeptide TMBP200 ... 87 6e-16 tr|A7R7R5|A7R7R5_VITVI Chromosome undetermined scaffold_1975, wh... 80 7e-14 tr|A7R709|A7R709_VITVI Chromosome undetermined scaffold_1525, wh... 80 7e-14 tr|Q5N749|Q5N749_ORYSJ Putative microtubule bundling polypeptide... 74 5e-12 tr|A2ZYZ0|A2ZYZ0_ORYSJ Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|Q94FN2|Q94FN2_ARATH Microtubule organization 1 protein (MOR1/... 69 9e-12 tr|Q9ZQN6|Q9ZQN6_ARATH Similar to ch-TOG protein from Homo sapie... 69 9e-12 tr|B8ABA5|B8ABA5_ORYSI Putative uncharacterized protein OS=Oryza... 71 2e-11 tr|A9SCU9|A9SCU9_PHYPA Predicted protein OS=Physcomitrella paten... 67 7e-11 tr|A4Q7P8|A4Q7P8_MEDTR VHS OS=Medicago truncatula GN=MtrDRAFT_AC... 65 2e-09 tr|Q140X4|Q140X4_BURXL Polymorphic membrane protein, Filamentous... 37 0.40 tr|A8IQW8|A8IQW8_CHLRE Putative uncharacterized protein (Fragmen... 35 1.5 tr|A4HBL6|A4HBL6_LEIBR Putative uncharacterized protein OS=Leish... 35 2.0 tr|Q7YWV7|Q7YWV7_CAEEL Protein R13H4.8, partially confirmed by t... 28 3.5 tr|Q5K7Q2|Q5K7Q2_CRYNE Protein ste16, putative OS=Cryptococcus n... 34 4.4 tr|Q55I66|Q55I66_CRYNE Putative uncharacterized protein OS=Crypt... 34 4.4 tr|Q2R164|Q2R164_ORYSJ Os11g0616300 protein OS=Oryza sativa subs... 33 5.7 tr|A3CDE2|A3CDE2_ORYSJ Putative uncharacterized protein OS=Oryza... 33 5.7 tr|Q0KI66|Q0KI66_DROME Myosin heavy chain-like, isoform F OS=Dro... 33 5.7 tr|A4IJ75|A4IJ75_DROME IP18260p (Fragment) OS=Drosophila melanog... 33 5.7 tr|Q4S2Z1|Q4S2Z1_TETNG Chromosome 3 SCAF14756, whole genome shot... 33 9.8 tr|B8CG09|B8CG09_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.8 tr|A3CHA8|A3CHA8_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.8 tr|Q7QCK5|Q7QCK5_ANOGA AGAP002670-PA (Fragment) OS=Anopheles gam... 33 9.8 tr|B4HLD9|B4HLD9_DROSE GM25733 OS=Drosophila sechellia GN=GM2573... 33 9.8
>tr|Q8S912|Q8S912_TOBAC Microtubule bundling polypeptide TMBP200 OS=Nicotiana tabacum PE=2 SV=1 Length = 2029
Score = 86.7 bits (213), Expect = 6e-16 Identities = 55/150 (36%), Positives = 81/150 (54%) Frame = -2
Query: 490 DLIKTCGPDQAVRAIKDLHGTALAMVQPMLDRQRSSDFVDSVNVNKGNLGKMGGTRHVKS 311 +L++ CG + + +KD+ G ALA+V ++R R + + G G T V S Sbjct: 1039 ELLRVCGQEMVSKNLKDIQGPALAIV---VERLRPYGVLQET-FDLGRTSSTGTTSKVGS 1094
Query: 310 TATGSGDRPASRSGGGIPRATAAKGNPVKISKXXXXXXXXXXXXXXXALFNLKNSNKEER 131 G PA R+ RA A++ P + S+ AL N+K+S+K ER Sbjct: 1095 KI-GKSTGPAERASRHGNRAGASRAIPTRNSRQETLMSVQDISVQSQALINVKDSHKGER 1153
Query: 130 ERSISRKLKFEEPRLEQVQEIESDLVKYFR 41 ER + R+ KFEEPRLEQ+Q++ESDL+KYFR Sbjct: 1154 ERIVVRRFKFEEPRLEQIQDLESDLMKYFR 1183
>tr|A7R7R5|A7R7R5_VITVI Chromosome undetermined scaffold_1975, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010191001 PE=4 SV=1 Length = 1048
Score = 79.7 bits (195), Expect = 7e-14 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 8/158 (5%) Frame = -2
Query: 490 DLIKTCGPDQAVRAIKDLHGTALAMVQPMLDRQRSSDFVDSVNVNKGNLGKMGGTRHVKS 311 +++K CG + + ++DLHG ALA+V L + S F DS K+ Sbjct: 383 EILKVCGQEIVSKNLRDLHGPALALVLERL--KPSGPFQDSFE-------------SAKA 427
Query: 310 TATGSGDRPASRSG----GGIP----RATAAKGNPVKISKXXXXXXXXXXXXXXXALFNL 155 +TG R + + G GIP RA +++ K ++ AL N+ Sbjct: 428 ISTGPASRSSLKVGKSVSNGIPKHGTRALSSRAISTKGTRPDALISAQDIAVQSQALLNI 487
Query: 154 KNSNKEERERSISRKLKFEEPRLEQVQEIESDLVKYFR 41 K+SNKE+RER + R+ KFEE R+EQ+Q++E+DL+KY R Sbjct: 488 KDSNKEDRERMVVRRFKFEELRIEQIQDLETDLMKYLR 525
>tr|A7R709|A7R709_VITVI Chromosome undetermined scaffold_1525, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008514001 PE=4 SV=1 Length = 2712
Score = 79.7 bits (195), Expect = 7e-14 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 8/158 (5%) Frame = -2
Query: 490 DLIKTCGPDQAVRAIKDLHGTALAMVQPMLDRQRSSDFVDSVNVNKGNLGKMGGTRHVKS 311 +++K CG + + ++DLHG ALA+V L + S F DS K+ Sbjct: 383 EILKVCGQEIVSKNLRDLHGPALALVLERL--KPSGPFQDSFE-------------SAKA 427
Query: 310 TATGSGDRPASRSG----GGIP----RATAAKGNPVKISKXXXXXXXXXXXXXXXALFNL 155 +TG R + + G GIP RA +++ K ++ AL N+ Sbjct: 428 ISTGPASRSSLKVGKSVSNGIPKHGTRALSSRAISTKGTRPDALISAQDIAVQSQALLNI 487
Query: 154 KNSNKEERERSISRKLKFEEPRLEQVQEIESDLVKYFR 41 K+SNKE+RER + R+ KFEE R+EQ+Q++E+DL+KY R Sbjct: 488 KDSNKEDRERMVVRRFKFEELRIEQIQDLETDLMKYLR 525
>tr|Q5N749|Q5N749_ORYSJ Putative microtubule bundling polypeptide TMBP200 (Os01g0816400 protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0085D07.49-1 PE=4 SV=1 Length = 1997
Score = 73.6 bits (179), Expect = 5e-12 Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 5/160 (3%) Frame = -2
Query: 490 DLIKTCGPDQAVRAIKDLHGTALAMVQPMLD----RQRSSDFVDSVNVNKGNLGKMGGTR 323 +++K CG D + +KDL LA+V L + SD V V + K G Sbjct: 1038 EILKICGQDVVAKNLKDLPSPTLAIVAERLKLSTVHEGFSDSVKMVTTSMSLPSKAGS-- 1095
Query: 322 HVKSTATGSGDRPASRSGGGIPRATAAKGNPVKISKXXXXXXXXXXXXXXXALFNLKNSN 143 K+ G DR G + +A + +G P + S ALFN+K+SN Sbjct: 1096 --KNNKHGPNDR-----GSNVSKAVSQRGIPARSS---VTMISSQDSIQSQALFNIKDSN 1145
Query: 142 KEERERSIS-RKLKFEEPRLEQVQEIESDLVKYFRGGFTL 26 KEERER + RK KFEEPR EQ+ E++ +L ++FR +L Sbjct: 1146 KEERERRVLVRKFKFEEPRREQIDELKIELFRHFREDVSL 1185
>tr|A2ZYZ0|A2ZYZ0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003762 PE=4 SV=1 Length = 1966
Score = 73.6 bits (179), Expect = 5e-12 Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 5/160 (3%) Frame = -2
Query: 490 DLIKTCGPDQAVRAIKDLHGTALAMVQPMLD----RQRSSDFVDSVNVNKGNLGKMGGTR 323 +++K CG D + +KDL LA+V L + SD V V + K G Sbjct: 1008 EILKICGQDVVAKNLKDLPSPTLAIVAERLKLSTVHEGFSDSVKMVTTSMSLPSKAGS-- 1065
Query: 322 HVKSTATGSGDRPASRSGGGIPRATAAKGNPVKISKXXXXXXXXXXXXXXXALFNLKNSN 143 K+ G DR G + +A + +G P + S ALFN+K+SN Sbjct: 1066 --KNNKHGPNDR-----GSNVSKAVSQRGIPARSS---VTMISSQDSIQSQALFNIKDSN 1115
Query: 142 KEERERSIS-RKLKFEEPRLEQVQEIESDLVKYFRGGFTL 26 KEERER + RK KFEEPR EQ+ E++ +L ++FR +L Sbjct: 1116 KEERERRVLVRKFKFEEPRREQIDELKIELFRHFREDVSL 1155
>tr|Q94FN2|Q94FN2_ARATH Microtubule organization 1 protein (MOR1/GEM1) OS=Arabidopsis thaliana GN=At2g35630 PE=2 SV=1 Length = 1978
Score = 68.9 bits (167), Expect(2) = 9e-12 Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 2/154 (1%) Frame = -2
Query: 496 LMDLIKTCGPDQAVRAIKDLHGTALAMVQPMLDRQRSSDFVDSVNVNKGNLGKM--GGTR 323 + ++++ G + + +KD+ G ALA+V L++ R + +K G + G T+ Sbjct: 1036 ISEILRVSGQEMIEKNLKDIQGPALALV---LEKVRPGFVQEPFESSKAMAGPVSKGVTK 1092
Query: 322 HVKSTATGSGDRPASRSGGGIPRATAAKGNPVKISKXXXXXXXXXXXXXXXALFNLKNSN 143 KST+ G+ + G RA KG+ S AL N K+SN Sbjct: 1093 ISKSTSNGTLKQ------GNRSRAVPTKGSSQITS-------VHDIAIQSQALLNTKDSN 1139
Query: 142 KEERERSISRKLKFEEPRLEQVQEIESDLVKYFR 41 KE+RER + R++KFEE R EQ+Q++E+D++K+FR Sbjct: 1140 KEDRERVVVRRIKFEELRPEQIQDLENDMMKFFR 1173
Score = 23.9 bits (50), Expect(2) = 9e-12 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3
Query: 45 FAEDLHWRMLSPDYR 1 F EDL R+LSPD++ Sbjct: 1172 FREDLQKRLLSPDFK 1186
>tr|Q9ZQN6|Q9ZQN6_ARATH Similar to ch-TOG protein from Homo sapiens OS=Arabidopsis thaliana GN=At2g35630 PE=2 SV=2 Length = 1611
Score = 68.9 bits (167), Expect(2) = 9e-12 Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 2/154 (1%) Frame = -2
Query: 496 LMDLIKTCGPDQAVRAIKDLHGTALAMVQPMLDRQRSSDFVDSVNVNKGNLGKM--GGTR 323 + ++++ G + + +KD+ G ALA+V L++ R + +K G + G T+ Sbjct: 669 ISEILRVSGQEMIEKNLKDIQGPALALV---LEKVRPGFVQEPFESSKAMAGPVSKGVTK 725
Query: 322 HVKSTATGSGDRPASRSGGGIPRATAAKGNPVKISKXXXXXXXXXXXXXXXALFNLKNSN 143 KST+ G+ + G RA KG+ S AL N K+SN Sbjct: 726 ISKSTSNGTLKQ------GNRSRAVPTKGSSQITS-------VHDIAIQSQALLNTKDSN 772
Query: 142 KEERERSISRKLKFEEPRLEQVQEIESDLVKYFR 41 KE+RER + R++KFEE R EQ+Q++E+D++K+FR Sbjct: 773 KEDRERVVVRRIKFEELRPEQIQDLENDMMKFFR 806
Score = 23.9 bits (50), Expect(2) = 9e-12 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3
Query: 45 FAEDLHWRMLSPDYR 1 F EDL R+LSPD++ Sbjct: 805 FREDLQKRLLSPDFK 819
>tr|B8ABA5|B8ABA5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04204 PE=4 SV=1 Length = 1941
Score = 71.2 bits (173), Expect = 2e-11 Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 5/160 (3%) Frame = -2
Query: 490 DLIKTCGPDQAVRAIKDLHGTALAMVQPMLD----RQRSSDFVDSVNVNKGNLGKMGGTR 323 +++K CG D + +KDL LA+V L + SD V V + K G Sbjct: 1039 EILKICGQDVVAKNLKDLPSPTLAIVAERLKLSTVHEGFSDSVKMVTTSMSLPSKAGS-- 1096
Query: 322 HVKSTATGSGDRPASRSGGGIPRATAAKGNPVKISKXXXXXXXXXXXXXXXALFNLKNSN 143 K+ G D G + +A + +G P + S ALFN+K+SN Sbjct: 1097 --KNNKHGPND-----CGSNVSKAVSQRGIPARSS---VTMISSQDSIQSQALFNIKDSN 1146
Query: 142 KEERERSIS-RKLKFEEPRLEQVQEIESDLVKYFRGGFTL 26 KEERER + RK KFEEPR EQ+ E++ +L ++FR +L Sbjct: 1147 KEERERRVLVRKFKFEEPRREQIDELKIELFRHFREDVSL 1186
>tr|A9SCU9|A9SCU9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106216 PE=4 SV=1 Length = 1974
Score = 67.0 bits (162), Expect(2) = 7e-11 Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 3/155 (1%) Frame = -2
Query: 496 LMDLIKTCGPDQAVRAIKDLHGTALAMVQPMLDRQRSSDFVDSVNVNKGNLGKMGGTRHV 317 L++LI+ + ++A K + G+ LA +Q + D QRSS + M T Sbjct: 1039 LVELIRVFDVEPVMKASKGIQGSGLAALQTVFDHQRSSSASEDSFT-------MSTTPKA 1091
Query: 316 KSTATGSGDRPASRSGGGIPRATAAKGNPVKISKXXXXXXXXXXXXXXXA--LFNLKNSN 143 S A+ S R +SR+ + R A+ + K +K LFNLK+S+ Sbjct: 1092 GSKASTSEVRASSRNPSTVGRGAGARQSGSKPTKTSAALAAEAYESQMQGQALFNLKDSH 1151
Query: 142 KEERERSISRKLKFEE-PRLEQVQEIESDLVKYFR 41 K ERER +RK KF++ R EQ +IE D+VK+FR Sbjct: 1152 KSERERLNARKYKFDDAARREQPHDIEVDIVKFFR 1186
Score = 22.7 bits (47), Expect(2) = 7e-11 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -3
Query: 45 FAEDLHWRMLSPDYR 1 F EDL ++LSPD++ Sbjct: 1185 FREDLQKKLLSPDFK 1199
>tr|A4Q7P8|A4Q7P8_MEDTR VHS OS=Medicago truncatula GN=MtrDRAFT_AC183502g21v2 PE=4 SV=1 Length = 645
Score = 64.7 bits (156), Expect = 2e-09 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%) Frame = -2
Query: 331 GTRHVKSTATGSGDRPASRSGGGIPRATAAKGN---PVKISKXXXXXXXXXXXXXXXALF 161 G V+ + S +P +RS RA A KG P+ + L Sbjct: 526 GVTKVRKSTASSVSKPGNRSVSA--RAGAIKGTKSEPISVQDIAVQSQA---------LL 574
Query: 160 NLKNSNKEERERSISRKLKFEEPRLEQVQEIESDLVKYFR 41 N+K+SNKEERER + R+ KF++PR+EQ+Q++E++++KYFR Sbjct: 575 NIKDSNKEERERLVVRRFKFQDPRIEQIQDLENEMMKYFR 614
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