NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917791
Clone id YMU001_000105_E05
Library
Length 415
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGCCTAGCCGAAGGATTCAGAAGGCTGGAGGGTCAGTTGCAGATGGACCAATGGGTGTCT
TTGAGCGCAGGACGGATGCTGATGAAACAGTGAAGCCACAGGAGGAAGCTAATGTTTCTA
TACTTAACAAGTATGGGAAATCGAAACTTGTTGATGGGTCAAGCCTCAAAGGAGTTGGAA
AAGGAACCTGATGTGGGAGGTAGGCATCCTGCCAGGAAGCATGCAAGAATTTCCTTGGGC
TGCCCAACAGAGAACACAGATGACCACTTAGATATTGTGTTACCAAGGAAGAGGAAGATA
CCAACATCTCTTCAGAAGAAAAAGACAGAAGTGACATTACCAAGTGTCAGCAGGGATGTC
TTGCAGGCAGAAAAGACAGTTCAATCAAGAGTTACAAGAGCTTCCTCTCTTATCA
■■Homology search results ■■ -
sp_hit_id P19361
Definition sp|P19361|28KD_MYCLE 28 kDa antigen OS=Mycobacterium leprae
Align length 43
Score (bit) 32.7
E-value 0.58
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917791|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E05.
         (415 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19361|28KD_MYCLE 28 kDa antigen OS=Mycobacterium leprae GN=M...    33   0.58 
sp|Q1DC88|Y1478_MYXXD UPF0234 protein MXAN_1478 OS=Myxococcus xa...    30   2.9  
sp|Q9WVS8|MK07_MOUSE Mitogen-activated protein kinase 7 OS=Mus m...    30   2.9  
sp|P20916|MAG_HUMAN Myelin-associated glycoprotein OS=Homo sapie...    30   2.9  
sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=C...    30   2.9  
sp|Q9UBY0|SL9A2_HUMAN Sodium/hydrogen exchanger 2 OS=Homo sapien...    30   3.8  
sp|P0C865|MK07_RAT Mitogen-activated protein kinase 7 OS=Rattus ...    30   3.8  
sp|P80439|COX3_ALLMA Cytochrome c oxidase subunit 3 OS=Allomyces...    30   4.9  
sp|Q9UZW0|PGK_PYRAB Phosphoglycerate kinase OS=Pyrococcus abyssi...    29   6.5  
sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1        29   8.4  
sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom...    29   8.4  
sp|Q5T230|UTF1_HUMAN Undifferentiated embryonic cell transcripti...    29   8.4  
sp|Q5KAM7|SEC23_CRYNE Protein transport protein SEC23 OS=Cryptoc...    29   8.4  
sp|P26618|PGFRA_MOUSE Alpha-type platelet-derived growth factor ...    29   8.4  
sp|P55704|NOPL_RHISN Nodulation outer protein L OS=Rhizobium sp....    29   8.4  
sp|Q8JZP9|GA2L1_MOUSE GAS2-like protein 1 OS=Mus musculus GN=Gas...    29   8.4  
sp|Q5HY92|FIGN_HUMAN Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2        29   8.4  
sp|Q2GJC1|Y962_ANAPZ UPF0176 protein APH_0962 OS=Anaplasma phago...    29   8.4  

>sp|P19361|28KD_MYCLE 28 kDa antigen OS=Mycobacterium leprae
           GN=ML0091 PE=4 SV=1
          Length = 236

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 196 PHQVPFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVL 68
           P +VP  TP+ LDP T   +P L    TL  +   + SS  ++
Sbjct: 139 PSEVPITTPISLDPGTDGTYPILGDPSTLGGTSPISTSSGELV 181


>sp|Q1DC88|Y1478_MYXXD UPF0234 protein MXAN_1478 OS=Myxococcus
           xanthus (strain DK 1622) GN=MXAN_1478 PE=3 SV=1
          Length = 165

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 124 LTSMGNRNL-LMGQASKELEKEPDVGGRHPARKHARISLGCPTENTDDHLDIVLPRKRKI 300
           LT +  RN+ L      ++EK     G H  ++  ++  G P E + + + ++   K K+
Sbjct: 66  LTKLAKRNISLFALEYGDIEKT----GLHNVKQVIKLQQGIPVEKSKELVKLLKDSKMKV 121

Query: 301 PTSLQKKKTEVTLPSVSRDVLQA 369
             S+Q  +  VT    +RD LQA
Sbjct: 122 QGSIQADQLRVT--GKNRDDLQA 142


>sp|Q9WVS8|MK07_MOUSE Mitogen-activated protein kinase 7 OS=Mus
           musculus GN=Mapk7 PE=1 SV=1
          Length = 806

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -1

Query: 184 PFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVLRSKTPIGPSATDP 29
           P P PL+  PSTS     LL+ ++L    G   S A  +    P GP   DP
Sbjct: 640 PIPAPLQTAPSTS-----LLASQSLVPPSGLPGSGAPEVLPYFPSGPPPPDP 686


>sp|P20916|MAG_HUMAN Myelin-associated glycoprotein OS=Homo sapiens
           GN=MAG PE=1 SV=1
          Length = 626

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/72 (23%), Positives = 35/72 (48%)
 Frame = +1

Query: 136 GNRNLLMGQASKELEKEPDVGGRHPARKHARISLGCPTENTDDHLDIVLPRKRKIPTSLQ 315
           G  N  +G +      +P V G   A +   +S+ C T++  D +  +   K+ + T + 
Sbjct: 312 GQDNRTVGLSVMYAPWKPTVNGTMVAVEGETVSILCSTQSNPDPILTIFKEKQILSTVIY 371

Query: 316 KKKTEVTLPSVS 351
           + + ++ LP+VS
Sbjct: 372 ESELQLELPAVS 383


>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm
            OS=Chlamydomonas reinhardtii GN=ODA4 PE=3 SV=1
          Length = 4568

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 242  QPKEILACFLAGCLPPTSGSFS 177
            Q KEI+ C +A C+ PT+GSF+
Sbjct: 2632 QLKEIINCQMAACMNPTAGSFN 2653


>sp|Q9UBY0|SL9A2_HUMAN Sodium/hydrogen exchanger 2 OS=Homo sapiens
           GN=SLC9A2 PE=2 SV=1
          Length = 812

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 139 NRNLLMGQASKELEKEPDVGGRHPARKHARISLGCPTEN---TDDHLDIVLPRKRKIPTS 309
           NR+ L    S+   KE  +  RH  R+  R       E+   T     + LP+  K+P  
Sbjct: 620 NRHSLTADTSERQAKEILIRRRHSLRESIRKDSSLNREHRASTSTSRYLSLPKNTKLPEK 679

Query: 310 LQKKKT 327
           LQK++T
Sbjct: 680 LQKRRT 685


>sp|P0C865|MK07_RAT Mitogen-activated protein kinase 7 OS=Rattus
           norvegicus GN=Mapk7 PE=3 SV=1
          Length = 806

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -1

Query: 184 PFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVLRSKTPIGPSATDP 29
           P P PL+  PSTS     LL+ ++L    G   S A  +    P GP   DP
Sbjct: 640 PVPAPLQTAPSTS-----LLASQSLVPPSGLPGSGAPEVLPYFPSGPPPPDP 686


>sp|P80439|COX3_ALLMA Cytochrome c oxidase subunit 3 OS=Allomyces
           macrogynus GN=COX3 PE=3 SV=1
          Length = 274

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 172 PLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVL 68
           P+ ++P   F+ P L +I  L S C  TVS A ++
Sbjct: 129 PVGIEPLNPFEVPLLNTIILLTSGCTITVSHAKII 163


>sp|Q9UZW0|PGK_PYRAB Phosphoglycerate kinase OS=Pyrococcus abyssi
           GN=pgk PE=3 SV=1
          Length = 410

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 23/56 (41%), Positives = 27/56 (48%)
 Frame = +3

Query: 15  IQKAGGSVADGPMGVFERRTDADETVKPQEEANVSILNKYGKSKLVDGSSLKGVGK 182
           I KA   VA+GPMGVFER   A  TV    E   +I      S L  G S+  + K
Sbjct: 316 IMKAKVVVANGPMGVFEREEFALGTV----EVFKAIAESEAFSVLGGGHSIASIQK 367


>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
          Length = 5376

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 244  PTENT-DDHLDIVLPRKRKIPTSLQKKKTEVTLPSVSRDVLQAEKTVQSRVTRAS 405
            PTE T    +  V P +  +PT +    TEVT  S     +  E+T+ + +T  S
Sbjct: 882  PTEETISTEVTTVSPEETTLPTEVPTVSTEVTNVSPEETSVPPEETILTEITTVS 936
tr_hit_id B4HF24
Definition tr|B4HF24|B4HF24_DROSE GM24690 OS=Drosophila sechellia
Align length 112
Score (bit) 40.4
E-value 0.045
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917791|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E05.
         (415 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4HF24|B4HF24_DROSE GM24690 OS=Drosophila sechellia GN=GM2469...    40   0.045
tr|Q6GLI2|Q6GLI2_XENTR MGC69416 protein OS=Xenopus tropicalis GN...    35   1.4  
tr|B5DL95|B5DL95_DROPS GA23024 OS=Drosophila pseudoobscura pseud...    35   1.4  
tr|B4G2X7|B4G2X7_DROPE GL23530 OS=Drosophila persimilis GN=GL235...    35   2.4  
tr|A8PS91|A8PS91_MALGO Putative uncharacterized protein OS=Malas...    34   3.2  
tr|B4HAN4|B4HAN4_DROPE GL27064 OS=Drosophila persimilis GN=GL270...    33   5.4  
tr|A1CUH8|A1CUH8_ASPCL Arrestin (Or S-antigen), N-terminal domai...    33   5.4  
tr|B6KLA8|B6KLA8_TOXGO Helicase, putative OS=Toxoplasma gondii M...    33   7.1  
tr|B8ZTU8|B8ZTU8_MYCLE 28 kDa antigen OS=Mycobacterium leprae Br...    33   9.2  
tr|B6KD19|B6KD19_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.2  
tr|A6S4N8|A6S4N8_BOTFB Putative uncharacterized protein OS=Botry...    33   9.2  
tr|Q9V1R8|Q9V1R8_PYRAB Smc1 chromosome segregation protein OS=Py...    33   9.2  

>tr|B4HF24|B4HF24_DROSE GM24690 OS=Drosophila sechellia GN=GM24690
           PE=4 SV=1
          Length = 279

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
 Frame = +3

Query: 69  RTDADETVKPQEEANVSILNKYGKSKLVDGSSLKGVGKGT*CGR*ASCQEACKNFLGLPN 248
           +TD   TVKP ++   +IL K    K  DG  L   G    C     C+    + L  P 
Sbjct: 110 KTDPPVTVKPTKKPRPTILEKMCAGK-KDGVMLTKSGS---CQDYYVCKSKKHHLLSCPG 165

Query: 249 REHR*PL-RYCVTKEEEDTNISSEEKDRSDITKCQQGCLAGRKDSSIKSYKS 401
           ++H  P  R C+   E   ++ S+E   SD      G  +  K++S+ +++S
Sbjct: 166 KQHFSPTRRICMKASEAKCSVGSQENKESDGPAITGGVCSDEKENSLVAHRS 217


>tr|Q6GLI2|Q6GLI2_XENTR MGC69416 protein OS=Xenopus tropicalis
           GN=MGC69416 PE=2 SV=1
          Length = 422

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +1

Query: 10  EGFRRLEGQLQMDQ-WVSLSAGRMLMKQ*SHRRKLMFLYLTSMGNRNLLMGQASKELEKE 186
           E F   EG    ++ ++  SAGR      +  R  +FL+ TS+           +EL+  
Sbjct: 343 EHFLDSEGHFMKNEAFLPFSAGRRSCAGENLARMELFLFFTSLLQNFTFQAPPGEELDLT 402

Query: 187 PDVGGRHPARKHARISL 237
           PDVGG  P R H   +L
Sbjct: 403 PDVGGTVPPRPHTVCAL 419


>tr|B5DL95|B5DL95_DROPS GA23024 OS=Drosophila pseudoobscura
            pseudoobscura GN=GA23024 PE=4 SV=1
          Length = 3665

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = -1

Query: 223  HASWQDAYLPHQVPFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVLRSKTPIGP 44
            H   Q    PH  P PTP     +T+        +E  +S+   T+  AS++++   +  
Sbjct: 2879 HQQQQHQQQPHSQPPPTPTGHTRTTTTTTTPTRPVEQQSSTSSKTIMHASIIKAAAGVAS 2938

Query: 43   SATDPPA 23
            SAT PPA
Sbjct: 2939 SATLPPA 2945


>tr|B4G2X7|B4G2X7_DROPE GL23530 OS=Drosophila persimilis GN=GL23530
           PE=4 SV=1
          Length = 482

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 25/92 (27%), Positives = 37/92 (40%)
 Frame = +3

Query: 63  ERRTDADETVKPQEEANVSILNKYGKSKLVDGSSLKGVGKGT*CGR*ASCQEACKNFLGL 242
           E+     + + P+       LNK G S   +  S  G  K T  G    C  +C+ ++ +
Sbjct: 313 EQNMGFKDLLGPKTPRGFGFLNKQGDSGFREAISYAGSWKDTRRGEVEKCARSCRRYVPI 372

Query: 243 PNREHR*PLRYCVTKEEEDTNISSEEKDRSDI 338
           P+R          T      NIS+  KDRS I
Sbjct: 373 PSRP---------TIPSNTKNISTVCKDRSSI 395


>tr|A8PS91|A8PS91_MALGO Putative uncharacterized protein
           OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
           GN=MGL_0215 PE=4 SV=1
          Length = 1797

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
 Frame = -1

Query: 268 SGHLCSLLGSPRKFLHASWQDAYLPHQVPFPTPLR--LDPSTSFDFPYLLSIETLASSCG 95
           S H+ SLL       HAS + + +    P P+PL   ++ STS D P  +   +L+ S  
Sbjct: 658 SSHVGSLLSRSLTSDHASAEQSPILSDAPVPSPLSQPMELSTSSDAPPPMR-RSLSGSLS 716

Query: 94  FTVSSASVLRSKTPIGPSATDPP 26
            +  S S L    P  PS T PP
Sbjct: 717 QSPHSPSHLAYVRPESPSPTPPP 739


>tr|B4HAN4|B4HAN4_DROPE GL27064 OS=Drosophila persimilis GN=GL27064
            PE=4 SV=1
          Length = 3575

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -1

Query: 196  PHQVPFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVLRSKTPIGPSATDPPA 23
            PH  P PTP     +T+        +E  +S+   T+  AS++++   +  SAT PPA
Sbjct: 2886 PHSQPPPTPTGHTRTTTTTTTPTRPVEQQSSTSSKTIMHASIIKAAAGVASSATLPPA 2943


>tr|A1CUH8|A1CUH8_ASPCL Arrestin (Or S-antigen), N-terminal domain
           protein OS=Aspergillus clavatus GN=ACLA_086660 PE=4 SV=1
          Length = 511

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -1

Query: 181 FPTPLRLDPSTSFDFPYLLSI--ETLASSCGFTVSSASVLRSKTPIGPSATDP 29
           +PTP  L+   ++ FP+   +    L   C  T ++A V RS T + P+  DP
Sbjct: 101 YPTPRILESGRTYQFPFTFVVPERLLPQVCSHTKTNAHVERSHTQLPPTLGDP 153


>tr|B6KLA8|B6KLA8_TOXGO Helicase, putative OS=Toxoplasma gondii ME49
            GN=TGME49_067030 PE=4 SV=1
          Length = 2729

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = -1

Query: 220  ASWQDAYLPHQVPFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVLRS 62
            ASW DA LP    FP+      S+SF FP+  S+++    C  TVSS S+L S
Sbjct: 1889 ASWPDASLPFSSSFPS------SSSF-FPFSSSLQSQTPDC--TVSSPSLLLS 1932


>tr|B8ZTU8|B8ZTU8_MYCLE 28 kDa antigen OS=Mycobacterium leprae
           Br4923 GN=MLBr00091 PE=4 SV=1
          Length = 236

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 196 PHQVPFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSSASVL 68
           P +VP  TP+ LDP T   +P L    TL  +   + SS  ++
Sbjct: 139 PSEVPITTPISLDPGTDGTYPILGDPSTLGGTSPISTSSGELV 181


>tr|B6KD19|B6KD19_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii ME49 GN=TGME49_070760 PE=4 SV=1
          Length = 1615

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -1

Query: 247  LGSPRKFLHASWQDAYLPHQVPFPTPLRLDPSTSFDFPYLLSIETLASSCGFTVSS---- 80
            + SPR    +S Q    P   P P  L + PS S   P+  S  + +SSC  + SS    
Sbjct: 1469 VASPR----SSSQSCPSPRASPAPATLPMSPSCSSSSPHCASFSSSSSSCSLSASSSPSP 1524

Query: 79   ASVLRSKTP 53
            AS   S +P
Sbjct: 1525 ASAFSSPSP 1533