BP917756 |
Clone id |
YMU001_000105_A08 |
Library |
YMU01 |
Length |
493 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000105_A08. |
Accession |
BP917756 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCTGGAAACAGTTCCGACGATTAAGAAATTAAGGGCATATGCAGAGAGGATTCGAGTGG GCGAGCTTGAGAAATGCTTAGACAAGATGGGTGGTGATCTGTCAACTAAGGACAAGAAGT TGGTAGAAGAATTGAGCAGAACTATTGTGAATAAGCTGCTTCATGGCCCGATGGTTCTCC TGCGCAACGATGGTTCGGGCAGCTCTTGTAGGGCTGAGATCTTGGAGAACATGCATGCTT TGGAACGCATGTTTGATCTGAATTCACAGACGTTGCCACAAGGTCAGAAAGCAAGTTCAA GGGCAGGTGAAGTAAGATAGCACTTCACTTTGAGAAAAGATCCGCATTGGATCTATGATC TTATGCACCCTCTAGATCTGTAGGGGAGCACCAAGGAGTCTTGAAAGAGACCCCCATTTA CCATTTGATCGAACAGAATTAGGCTGTAAAACACCCATTGTTTGAAATAAAGCGGGATTA TGCTTTTACTCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P93111 |
Definition |
sp|P93111|HEM11_CUCSA Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus |
Align length |
100 |
Score (bit) |
120.0 |
E-value |
3.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917756|Adiantum capillus-veneris mRNA, clone: YMU001_000105_A08. (493 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P93111|HEM11_CUCSA Glutamyl-tRNA reductase 1, chloroplastic O... 120 3e-27 sp|P42804|HEM11_ARATH Glutamyl-tRNA reductase 1, chloroplastic O... 118 2e-26 sp|Q42843|HEM11_HORVU Glutamyl-tRNA reductase 1, chloroplastic O... 110 3e-24 sp|P0C587|HEM1_ORYSJ Glutamyl-tRNA reductase, chloroplastic OS=O... 109 6e-24 sp|A2Z928|HEM1_ORYSI Glutamyl-tRNA reductase, chloroplastic OS=O... 109 6e-24 sp|Q96563|HEM12_HORVU Glutamyl-tRNA reductase 2 (Fragment) OS=Ho... 109 8e-24 sp|P49295|HEM12_CUCSA Glutamyl-tRNA reductase 2, chloroplastic O... 107 4e-23 sp|O65796|HEM13_HORVU Glutamyl-tRNA reductase 3, chloroplastic O... 103 3e-22 sp|P49294|HEM12_ARATH Glutamyl-tRNA reductase 2, chloroplastic O... 101 2e-21 sp|Q3AXK4|HEM1_SYNS9 Glutamyl-tRNA reductase OS=Synechococcus sp... 79 1e-14 sp|Q0I9I2|HEM1_SYNS3 Glutamyl-tRNA reductase OS=Synechococcus sp... 75 2e-13 sp|Q3AK73|HEM1_SYNSC Glutamyl-tRNA reductase OS=Synechococcus sp... 73 8e-13 sp|A5GTE8|HEM1_SYNR3 Glutamyl-tRNA reductase OS=Synechococcus sp... 73 8e-13 sp|Q7U769|HEM1_SYNPX Glutamyl-tRNA reductase OS=Synechococcus sp... 73 8e-13 sp|A5GLB0|HEM1_SYNPW Glutamyl-tRNA reductase OS=Synechococcus sp... 71 3e-12 sp|Q7V809|HEM1_PROMM Glutamyl-tRNA reductase OS=Prochlorococcus ... 70 5e-12 sp|A2CAB8|HEM1_PROM3 Glutamyl-tRNA reductase OS=Prochlorococcus ... 69 9e-12 sp|B0BZF9|HEM1_ACAM1 Glutamyl-tRNA reductase OS=Acaryochloris ma... 69 9e-12 sp|Q7VCA1|HEM1_PROMA Glutamyl-tRNA reductase OS=Prochlorococcus ... 69 1e-11 sp|Q117I4|HEM1_TRIEI Glutamyl-tRNA reductase OS=Trichodesmium er... 69 2e-11 sp|Q5N3B4|HEM1_SYNP6 Glutamyl-tRNA reductase OS=Synechococcus sp... 69 2e-11 sp|Q31QY3|HEM1_SYNE7 Glutamyl-tRNA reductase OS=Synechococcus el... 69 2e-11 sp|Q31BA9|HEM1_PROM9 Glutamyl-tRNA reductase OS=Prochlorococcus ... 68 2e-11 sp|A2BW63|HEM1_PROM5 Glutamyl-tRNA reductase OS=Prochlorococcus ... 68 2e-11 sp|A2BQQ3|HEM1_PROMS Glutamyl-tRNA reductase OS=Prochlorococcus ... 68 3e-11 sp|Q7V1T7|HEM1_PROMP Glutamyl-tRNA reductase OS=Prochlorococcus ... 68 3e-11 sp|A8G4E6|HEM1_PROM2 Glutamyl-tRNA reductase OS=Prochlorococcus ... 68 3e-11 sp|A3PCH6|HEM1_PROM0 Glutamyl-tRNA reductase OS=Prochlorococcus ... 68 3e-11 sp|Q7NLA8|HEM1_GLOVI Glutamyl-tRNA reductase OS=Gloeobacter viol... 68 3e-11 sp|P28463|HEM1_SYNY3 Glutamyl-tRNA reductase OS=Synechocystis sp... 67 4e-11
>sp|P93111|HEM11_CUCSA Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1 Length = 552
Score = 120 bits (302), Expect = 3e-27 Identities = 63/100 (63%), Positives = 73/100 (73%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGDLSTKDKKLVEELSRTIVNKLLHGPMVLL 182 LETVPTIKKLRAYAERIR ELEKCL KMG D+ K ++ V++LSR IVNKLLHGPM L Sbjct: 447 LETVPTIKKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHL 506
Query: 183 RNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKASSR 302 R DGS S +E LENMHAL RMF L ++ QK ++ Sbjct: 507 RCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAK 546
>sp|P42804|HEM11_ARATH Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2 Length = 543
Score = 118 bits (295), Expect = 2e-26 Identities = 61/97 (62%), Positives = 71/97 (73%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGDLSTKDKKLVEELSRTIVNKLLHGPMVLL 182 LETVPTIKKLRAYAERIRV ELEKC+ KMG D++ K + V++LSR IVN+ LHGPM L Sbjct: 440 LETVPTIKKLRAYAERIRVAELEKCMSKMGDDINKKTTRAVDDLSRGIVNRFLHGPMQHL 499
Query: 183 RNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKA 293 R DGS S +E LENMHAL RM+ L L + KA Sbjct: 500 RCDGSDSRTLSETLENMHALNRMYGLEKDILEEKLKA 536
>sp|Q42843|HEM11_HORVU Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1 Length = 527
Score = 110 bits (275), Expect = 3e-24 Identities = 60/101 (59%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGD-LSTKDKKLVEELSRTIVNKLLHGPMVL 179 LETVPTIKKLR+YA+RIR ELEKCL K+G D L+ K ++ +EELS IVNKLLHGP+ Sbjct: 421 LETVPTIKKLRSYADRIRASELEKCLQKIGEDNLNKKMRRSIEELSTGIVNKLLHGPLQH 480
Query: 180 LRNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKASSR 302 LR DGS S E LENMHAL RMF L+++ QK ++ Sbjct: 481 LRCDGSDSRTLDETLENMHALNRMFSLDTEKAVLEQKIKAK 521
>sp|P0C587|HEM1_ORYSJ Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1 Length = 537
Score = 109 bits (273), Expect = 6e-24 Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGDLSTKD-KKLVEELSRTIVNKLLHGPMVL 179 LETVPTIKKLR+YA+RIR ELEKCL K+G D TK ++ +EELS IVNKLLHGP+ Sbjct: 431 LETVPTIKKLRSYADRIRASELEKCLQKIGEDALTKKMRRSIEELSTGIVNKLLHGPLQH 490
Query: 180 LRNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKASSR 302 LR DGS S E LENMHAL RMF L+++ QK ++ Sbjct: 491 LRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAK 531
>sp|A2Z928|HEM1_ORYSI Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2 Length = 537
Score = 109 bits (273), Expect = 6e-24 Identities = 60/101 (59%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGD-LSTKDKKLVEELSRTIVNKLLHGPMVL 179 LETVPTIKKLR+YA+RIR ELEKCL K+G D L+ K ++ +EELS IVNKLLHGP+ Sbjct: 431 LETVPTIKKLRSYADRIRASELEKCLQKIGEDSLTKKMRRSIEELSTGIVNKLLHGPLQH 490
Query: 180 LRNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKASSR 302 LR DGS S E LENMHAL RMF L+++ QK ++ Sbjct: 491 LRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAK 531
>sp|Q96563|HEM12_HORVU Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1 Length = 465
Score = 109 bits (272), Expect = 8e-24 Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 1/101 (0%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGD-LSTKDKKLVEELSRTIVNKLLHGPMVL 179 LETVPTIKKLR+YA+RIR EL+KCL K+G D L+ K ++ +EELS IVNKLLHGP+ Sbjct: 359 LETVPTIKKLRSYADRIRASELDKCLQKIGEDNLNKKTRRSIEELSTGIVNKLLHGPLQH 418
Query: 180 LRNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKASSR 302 LR DGS S E L+NMHAL RMF+L+++ QK ++ Sbjct: 419 LRCDGSDSRTLDETLDNMHALNRMFNLDTEKAVLEQKIKAK 459
>sp|P49295|HEM12_CUCSA Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1 Length = 542
Score = 107 bits (266), Expect = 4e-23 Identities = 54/88 (61%), Positives = 63/88 (71%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGDLSTKDKKLVEELSRTIVNKLLHGPMVLL 182 LETVPTIKK RAY ERIR EL+KCL KMG D+ K K + +LS I NKLLHGP+ L Sbjct: 437 LETVPTIKKFRAYVERIRAAELDKCLSKMGEDIPKKKKVAINDLSLGIANKLLHGPIQHL 496
Query: 183 RNDGSGSSCRAEILENMHALERMFDLNS 266 R DG+ S EIL+NMHA+ RMFDL + Sbjct: 497 RCDGNDSRTLDEILQNMHAINRMFDLET 524
>sp|O65796|HEM13_HORVU Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1 Length = 535
Score = 103 bits (258), Expect = 3e-22 Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGDLSTKD-KKLVEELSRTIVNKLLHGPMVL 179 +ETVPTIKKLR+YA+R+R EL+KCL K+G D TK ++ +E+LS IVN+LLHGP+ Sbjct: 427 METVPTIKKLRSYADRVRASELDKCLQKIGEDALTKKMRRSIEQLSTGIVNRLLHGPLQH 486
Query: 180 LRNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKASSR 302 LR DG+ + E LENMHAL RMF L+++ QK ++ Sbjct: 487 LRCDGTDNRTLDETLENMHALNRMFGLDTEKAVMEQKIKTK 527
>sp|P49294|HEM12_ARATH Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2 Length = 530
Score = 101 bits (252), Expect = 2e-21 Identities = 54/97 (55%), Positives = 69/97 (71%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGDLSTKDKKLVEELSRTIVNKLLHGPMVLL 182 LETVPTIKKLR Y ERI E+EK L KMG D++ K +K V++L R IVNKLLHGPM L Sbjct: 429 LETVPTIKKLRGYTERIIAAEIEKSLPKMGIDMNKKMRKTVDDLIRGIVNKLLHGPMQHL 488
Query: 183 RNDGSGSSCRAEILENMHALERMFDLNSQTLPQGQKA 293 R DG+ S +E L+NM AL RM+ L+++ L + +A Sbjct: 489 RCDGNDSRTLSETLDNMQALNRMYGLDAEILEEKIRA 525
>sp|Q3AXK4|HEM1_SYNS9 Glutamyl-tRNA reductase OS=Synechococcus sp. (strain CC9902) GN=hemA PE=3 SV=1 Length = 432
Score = 79.0 bits (193), Expect = 1e-14 Identities = 41/87 (47%), Positives = 59/87 (67%) Frame = +3
Query: 3 LETVPTIKKLRAYAERIRVGELEKCLDKMGGDLSTKDKKLVEELSRTIVNKLLHGPMVLL 182 LE VPTI +LR+ E IR EL+K L +MG D S +++K+VE LS+ I+NK+LH P+ L Sbjct: 348 LEAVPTINQLRSSMETIRTEELQKALSRMGPDFSARERKVVEALSKGIINKILHTPVTKL 407
Query: 183 RNDGSGSSCRAEILENMHALERMFDLN 263 R S R+E + + A+ER+FDL+ Sbjct: 408 R----ASQARSERQQALRAVERLFDLD 430
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LN13 |
Definition |
tr|B8LN13|B8LN13_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
100 |
Score (bit) |
130.0 |
E-value |
3.0e-29 |
Report |
|