BP917732
Clone id YMU001_000104_G02
Library
Length 305
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCCTCTTCTGCTGTGTCTTAAATGCTCCAAGAATCCATTGGTCATCGGTGAGGGTTCCAT
TGACAAACAACTGCTACTGCTGTGTGAAGCTTCCCTATCATGAAAATGGGAAGAGACTTT
CTCTGATGATGCCTCTTTAAGCGCCTTCATCTGTGTAAGTTCTTCAGTCAAAGAGCTCAA
CTGCTCACTCAGGGAGGTGATTGGTGCTTGCAACGCCGGAAGTGCCACCCGTGAATATGC
CAGCTCCTTCTCTTGCTTTAGACAAGCCTCTCGGAGATCGGCCACCTCTCTCAATGTTGC
TGGAA
■■Homology search results ■■ -
sp_hit_id Q923S8
Definition sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus
Align length 45
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917732|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G02.
(305 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus G... 31 2.2
sp|Q87MF7|Y2298_VIBPA UPF0294 protein VP2298 OS=Vibrio parahaemo... 30 3.8
sp|Q8TE68|ES8L1_HUMAN Epidermal growth factor receptor kinase su... 29 6.4
sp|A7MY11|Y3217_VIBHB UPF0294 protein VIBHAR_03217 OS=Vibrio har... 29 8.4
sp|Q6P734|IC1_RAT Plasma protease C1 inhibitor OS=Rattus norvegi... 29 8.4

>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus
GN=Pank4 PE=1 SV=1
Length = 773

Score = 30.8 bits (68), Expect = 2.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2

Query: 119 FSDDASLSAFICVSSSVKELNCSLREVIGACNAGSATREYASSFS 253
F+D++ + + V V+EL C EVI ACN+G A + S S
Sbjct: 621 FADNSGIDIILGVFPFVRELLCRGIEVILACNSGPALNDVTYSES 665


>sp|Q87MF7|Y2298_VIBPA UPF0294 protein VP2298 OS=Vibrio
parahaemolyticus GN=VP2298 PE=3 SV=1
Length = 281

Score = 30.0 bits (66), Expect = 3.8
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2

Query: 56 SIDKQLLLLCEASLS*KWEETFSDDA----SLSAFICVSSSVKELNCSLREVIGAC 211
S DKQLLLL EAS++ +++ D + +SAF + S ++ + ++ I AC
Sbjct: 84 SADKQLLLLQEASMTDSFKQWLVDGSWVSNQVSAFKALGSGAGVISIAQKQPIKAC 139


>sp|Q8TE68|ES8L1_HUMAN Epidermal growth factor receptor kinase
substrate 8-like protein 1 OS=Homo sapiens GN=EPS8L1
PE=1 SV=2
Length = 723

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3

Query: 210 ATPEVPPVNMPAPSLALDKPLGDRP 284
+TP PP PAP AL +P DRP
Sbjct: 552 STPPPPPAPAPAPPPALARPRWDRP 576


>sp|A7MY11|Y3217_VIBHB UPF0294 protein VIBHAR_03217 OS=Vibrio
harveyi (strain ATCC BAA-1116 / BB120) GN=VIBHAR_03217
PE=3 SV=1
Length = 282

Score = 28.9 bits (63), Expect = 8.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2

Query: 56 SIDKQLLLLCEASLS*KWEETFSD----DASLSAFICVSSSVKELNCSLREVIGAC 211
S +KQLLLL EASL+ +++ D +SAF + S ++ + +E I AC
Sbjct: 84 SANKQLLLLQEASLTDEFKNWLVDGHWVSNQVSAFKALGSGAGVISIAQKEPIRAC 139


>sp|Q6P734|IC1_RAT Plasma protease C1 inhibitor OS=Rattus norvegicus
GN=Serping1 PE=2 SV=1
Length = 504

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2

Query: 62 DKQLLLLCEASLS*KWEETFSDDASLSAFICVSSSVK 172
D +L+LL LS KW++TF +++F+ +S +K
Sbjct: 289 DTRLVLLNAVYLSAKWKKTFEQKKMMASFLYKNSMIK 325


tr_hit_id A9FK86
Definition tr|A9FK86|A9FK86_SORC5 Putative uncharacterized protein OS=Sorangium cellulosum (strain So ce56)
Align length 58
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917732|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G02.
(305 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9FK86|A9FK86_SORC5 Putative uncharacterized protein OS=Soran... 35 1.9

>tr|A9FK86|A9FK86_SORC5 Putative uncharacterized protein
OS=Sorangium cellulosum (strain So ce56) GN=sce4929 PE=4
SV=1
Length = 639

Score = 35.0 bits (79), Expect = 1.9
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +3

Query: 129 MPL*APSSV*VLQSKSSTAHSGR*LVLATPEVPPVNMPAPSLALDKPLGDRPPLSMLL 302
+P APS++ + L ATP VPP + PAP+ D PL RPP S+ L
Sbjct: 515 LPAAAPSALPAAAPSVPPVATPSALPAATPSVPPASTPAPASVSD-PLSVRPPPSLTL 571