BP917723
Clone id YMU001_000104_F04
Library
Length 557
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGCTAAAAACCATAGAGCTTGTCTCGATGGGACATCTTTGCCATCCCCTTTACTCTAAT
TATTCGCACCAATTCCAAAGTATCACATCAAGCTACAAGGCATCTTGATAAAGGGACAGC
CCTGATCACATGTTTACAGTAACAAAAGCAGCAACAGCCAGTAATAATTGCAAATATTTT
ACTGGCCAAACTGGCCTGACTATGTCGATACAACATGAACAAAAAGCAAGCAGTAACAAC
AGCATATTTTTACAGACAAAACCCTGTCTACAAGTTGCTAAATCGTTCATTTCAAGGTCA
CGCTTATGATTACCATTACGAAACATCAGAGCGAGACATCTATGACAAGCTCGTACCTTC
TGAGAATAACATCTACCAGGTAGAAATGTTCAGTACCTAACAGGGGGGCCTTGTTCAAAA
AAGAATGTTGTCTGCAAAAGGAAAATCCTGAGCCAAAATTGCCTGTGAACTTCACATCAA
AGAGGCCAGTTTAGCACTTCCAGTAATCCAGCTAAACTTGCACAACTTGAAGTATAGTAT
AGACTCTCTGTAGAAAC
■■Homology search results ■■ -
sp_hit_id Q803X0
Definition sp|Q803X0|SERC5_DANRE Serine incorporator 5 OS=Danio rerio
Align length 49
Score (bit) 31.6
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917723|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_F04.
(557 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q803X0|SERC5_DANRE Serine incorporator 5 OS=Danio rerio GN=se... 32 2.7
sp|A1U7H5|ATPG_MARAV ATP synthase gamma chain OS=Marinobacter aq... 30 8.0

>sp|Q803X0|SERC5_DANRE Serine incorporator 5 OS=Danio rerio
GN=serinc5 PE=2 SV=1
Length = 460

Score = 31.6 bits (70), Expect = 2.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3

Query: 243 AVVTACFLFMLYRHSQASLASKIFAIITGCCCFCYCKHVIRAVPLSRCL 97
AV F+FM Y H +A +KIF + G CF ++ + +S C+
Sbjct: 209 AVGGMVFMFMYYTHPEACFLNKIFLGVNGGLCF-----IVSLLAISPCI 252


>sp|A1U7H5|ATPG_MARAV ATP synthase gamma chain OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=atpG
PE=3 SV=1
Length = 287

Score = 30.0 bits (66), Expect = 8.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2

Query: 296 GHAYDYHYETSERDIYDKLVPS--ENNIYQ 379
GH +DY YE R I D L+P E+ +YQ
Sbjct: 200 GHQWDYIYEPDSRPILDGLMPRYIESQVYQ 229


tr_hit_id Q4X6V1
Definition tr|Q4X6V1|Q4X6V1_PLACH Putative uncharacterized protein OS=Plasmodium chabaudi
Align length 51
Score (bit) 35.4
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917723|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_F04.
(557 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4X6V1|Q4X6V1_PLACH Putative uncharacterized protein OS=Plasm... 35 2.1
tr|Q1MQW5|Q1MQW5_LAWIP Competence protein ComGF OS=Lawsonia intr... 34 6.1

>tr|Q4X6V1|Q4X6V1_PLACH Putative uncharacterized protein
OS=Plasmodium chabaudi GN=PC302434.00.0 PE=4 SV=1
Length = 137

Score = 35.4 bits (80), Expect = 2.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2

Query: 245 YFYRQNPVYKLLNRSFQGHAYDYHYETSERDIYD-KLVPSENNIYQVEMFS 394
+FY Q +Y +L + F H+ Y Y T + + D L+ +NNI ++F+
Sbjct: 12 FFYNQYSIYNILKKKFNEHSIIYEYITKQNILIDILLILKKNNIDDYKLFA 62


>tr|Q1MQW5|Q1MQW5_LAWIP Competence protein ComGF OS=Lawsonia
intracellularis (strain PHE/MN1-00) GN=LI0558 PE=4 SV=1
Length = 423

Score = 33.9 bits (76), Expect = 6.1
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2

Query: 203 CRYNMNKKQAVTTAYFYRQNPVYKLLNRSFQGHAYDYHYETSERDIYDKLV 355
C ++++K+Q +T + P+ + L+R F YHY+T ++ DK++
Sbjct: 92 CEHHIHKRQ-LTDWVLNKLKPIVEPLSRDFWDRMVKYHYQTDRTELADKII 141