BP917720
Clone id YMU001_000104_F01
Library
Length 351
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCTAAAATCTGCCAGAATTTGCTTCTTTATAGTACTTCTGAAACATTTCTAGATTTTGAT
GGTGCCATGCCAGCAACCTCCATAGAATCTTGCGCACGGTTCTGACCATTCACTTTTCCA
CTGCTAGATTTAACTGTACCTGAAACCTTTGTTTCATCAACAGTTGCAAGCAATGAGGAA
GCTTCAAGTGCATTATTGCACTTTTGTGTTACCTCATTCTCTATAACATTGACAGTTTCG
TTTCTCTCCTTTGGTAAAATCATGTCTATTGTCCTCTCACCTGACCAAACATCTAAGGAG
ATGGTTGAGGCATCCGCTTGAGCTAAATCACACCTTGTGCTTTGTCCCAAT
■■Homology search results ■■ -
sp_hit_id Q82851
Definition sp|Q82851|POL_JEMBR Gag-Pol polyprotein OS=Jembrana disease virus
Align length 28
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917720|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_F01.
(351 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q82851|POL_JEMBR Gag-Pol polyprotein OS=Jembrana disease viru... 31 2.2
sp|Q82850|GAG_JEMBR Gag polyprotein OS=Jembrana disease virus GN... 31 2.2

>sp|Q82851|POL_JEMBR Gag-Pol polyprotein OS=Jembrana disease virus
GN=gag-pol PE=3 SV=1
Length = 1432

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -3

Query: 106 VRTVRKILWRLLAWHH-QNLEMFQKYYK 26
+ T K+LW LLA HH +N +M +KY++
Sbjct: 77 ILTTLKVLWSLLAGHHPENSDMAEKYWE 104


>sp|Q82850|GAG_JEMBR Gag polyprotein OS=Jembrana disease virus
GN=gag PE=3 SV=1
Length = 436

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -3

Query: 106 VRTVRKILWRLLAWHH-QNLEMFQKYYK 26
+ T K+LW LLA HH +N +M +KY++
Sbjct: 77 ILTTLKVLWSLLAGHHPENSDMAEKYWE 104


tr_hit_id Q5AQW4
Definition tr|Q5AQW4|Q5AQW4_EMENI Putative uncharacterized protein OS=Emericella nidulans
Align length 60
Score (bit) 35.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917720|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_F01.
(351 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5AQW4|Q5AQW4_EMENI Putative uncharacterized protein OS=Emeri... 35 1.8
tr|A2Q8E9|A2Q8E9_ASPNC Function: mdr of B. subtilis is a multidr... 33 5.4
tr|A7TCS7|A7TCS7_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 9.1

>tr|Q5AQW4|Q5AQW4_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN9316.2 PE=4 SV=1
Length = 670

Score = 35.0 bits (79), Expect = 1.8
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1

Query: 91 CARF*PFTFPLLDLTVPETFVSSTVASNEEASSALLHFCVTSFSITLTVSFLSFGKIMSI 270
CA F P+ +DLT+ T V + E S L++ VT+F++T T SFG++ +
Sbjct: 70 CALFMPYFLATIDLTIVATAVPFIASHFNELSE--LNWIVTAFTLTSTALIPSFGQLSDV 127


>tr|A2Q8E9|A2Q8E9_ASPNC Function: mdr of B. subtilis is a
multidrug-efflux transporter for e. g. puromycin
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An01g04100 PE=4 SV=1
Length = 631

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1

Query: 106 PFTFPLLDLTVPETFVSSTVASNEEASSALLHFCVTSFSITLTVSFLSFGKIMSI 270
PFT LDLT+ T +ST+AS+ L ++ +T+FS+T T FG++ +
Sbjct: 88 PFTLSTLDLTIVAT-ATSTIASHFNQFDEL-NWIITAFSLTSTTFIPIFGQLADV 140


>tr|A7TCS7|A7TCS7_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g69077 PE=4 SV=1
Length = 118

Score = 32.7 bits (73), Expect = 9.1
Identities = 30/93 (32%), Positives = 41/93 (44%)
Frame = +1

Query: 70 PATSIESCARF*PFTFPLLDLTVPETFVSSTVASNEEASSALLHFCVTSFSITLTVSFLS 249
P + ES P+T + LT P T S + + S +L TS SI LT + S
Sbjct: 1 PPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTS 60

Query: 250 FGKIMSIVLSPDQTSKEMVEASA*AKSHLVLCP 348
SIVL+P TS+ +V +VL P
Sbjct: 61 ----ESIVLTPPYTSESIVLTPPYTSESIVLTP 89



Score = 32.7 bits (73), Expect = 9.1
Identities = 30/93 (32%), Positives = 41/93 (44%)
Frame = +1

Query: 70 PATSIESCARF*PFTFPLLDLTVPETFVSSTVASNEEASSALLHFCVTSFSITLTVSFLS 249
P + ES P+T + LT P T S + + S +L TS SI LT + S
Sbjct: 12 PPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTS 71

Query: 250 FGKIMSIVLSPDQTSKEMVEASA*AKSHLVLCP 348
SIVL+P TS+ +V +VL P
Sbjct: 72 ----ESIVLTPPYTSESIVLTPPYTSESIVLTP 100



Score = 32.7 bits (73), Expect = 9.1
Identities = 30/93 (32%), Positives = 41/93 (44%)
Frame = +1

Query: 70 PATSIESCARF*PFTFPLLDLTVPETFVSSTVASNEEASSALLHFCVTSFSITLTVSFLS 249
P + ES P+T + LT P T S + + S +L TS SI LT + S
Sbjct: 23 PPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTSESIVLTPPYTS 82

Query: 250 FGKIMSIVLSPDQTSKEMVEASA*AKSHLVLCP 348
SIVL+P TS+ +V +VL P
Sbjct: 83 ----ESIVLTPPYTSESIVLTPPYTSESIVLTP 111