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NBDC - LSDB Archive
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BP917664
Clone id YMU001_000103_H09
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCAGCCTGGGCTTAATAAGCTCCTCCATAATTCTATGCTCTCTTGTAAAGTTGTAATGTG
GCACAAGAACCCATCTTGTACTTGAATGAGAGGTGCTTGGTATAGCACCATATGACATCT
TTCTCCCTTATGAGGGGTTCTTGGGTAAAGCAATATCTTTCTCCCTTATGTACTTGAACG
AGAGGTTCTTGGGTAACCATACAGCTTCTTCCTCCCTTACGTGCCCAATGACGTGGTTAG
CAAAAGCAAAATCTGTTTGCTTTGGCATCTCTTCGATCTATACAAGTTTGAAACTACTCA
ACAGTGTTTGTACATTAGGCACGGCCGTGCTTCAATCCCTGGAGTCAAAGAACAACCTAA
TGGCGTCTGTTTCCGTCGTTAGCATGAGAATCCACG
■■Homology search results ■■ -
sp_hit_id O14772
Definition sp|O14772|FPGT_HUMAN Fucose-1-phosphate guanylyltransferase OS=Homo sapiens
Align length 58
Score (bit) 32.0
E-value 0.99
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917664|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_H09.
         (396 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O14772|FPGT_HUMAN Fucose-1-phosphate guanylyltransferase OS=H...    32   0.99 
sp|Q9ZCE0|XERC_RICPR Tyrosine recombinase xerC OS=Rickettsia pro...    30   2.9  
sp|P74101|Y1895_SYNY3 Uncharacterized protein sll1895 OS=Synecho...    30   3.7  
sp|Q59833|GLGB1_STRCO 1,4-alpha-glucan-branching enzyme 1 OS=Str...    30   3.7  
sp|P25653|FIG2_YEAST Factor-induced gene 2 protein OS=Saccharomy...    30   3.7  
sp|Q68VT2|XERC_RICTY Tyrosine recombinase xerC OS=Rickettsia typ...    30   4.9  
sp|Q82JF0|GLGB1_STRAW 1,4-alpha-glucan-branching enzyme 1 OS=Str...    30   4.9  
sp|Q6ZN68|D19P2_HUMAN Protein dpy-19 homolog 2-like 2 OS=Homo sa...    30   4.9  
sp|Q05516|ZBT16_HUMAN Zinc finger and BTB domain-containing prot...    29   6.4  
sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arab...    29   6.4  
sp|Q6NUT2|D19L2_HUMAN Protein dpy-19 homolog 2 OS=Homo sapiens G...    29   6.4  
sp|P39535|YJT8_YEAST Uncharacterized transporter YJL198W OS=Sacc...    29   8.3  
sp|Q921A2|MYCT_RAT Proton myo-inositol cotransporter OS=Rattus n...    29   8.3  
sp|Q3UHK1|MYCT_MOUSE Proton myo-inositol cotransporter OS=Mus mu...    29   8.3  
sp|P52067|FSR_ECOLI Fosmidomycin resistance protein OS=Escherich...    29   8.3  

>sp|O14772|FPGT_HUMAN Fucose-1-phosphate guanylyltransferase OS=Homo
           sapiens GN=FPGT PE=1 SV=2
          Length = 594

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +3

Query: 138 FLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAKSVCFGIS-SIYTSLKLLNSV 308
           FL     ++L    E F GN T      C   W A+   VC  +S S+ TSLK+LN+V
Sbjct: 497 FLSCLDVWNLKVTEELFSGNKT------CLSLWTARIFPVCSSLSDSVITSLKMLNAV 548


>sp|Q9ZCE0|XERC_RICPR Tyrosine recombinase xerC OS=Rickettsia
           prowazekii GN=xerC PE=3 SV=1
          Length = 305

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +3

Query: 123 LPYEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAK-------SVCFGISSIY 281
           + Y   L   + F   Y +E    NH  ++ +    +WLAK K       S+  G+S++ 
Sbjct: 29  IAYNNDLKHFLEFMNYYNSELVTLNHIKTADIRLIRSWLAKRKCENFTASSIARGLSTVK 88

Query: 282 TSLKLLNSVCTLGTAVLQSLES 347
              K L     L   ++ S++S
Sbjct: 89  NFYKFLEKTLLLNNHIIFSIKS 110


>sp|P74101|Y1895_SYNY3 Uncharacterized protein sll1895
           OS=Synechocystis sp. (strain PCC 6803) GN=sll1895 PE=4
           SV=1
          Length = 696

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 123 ERCHMVLYQAPLIQVQDGFLCHITTLQESIELWRSLLSPG 4
           ER   +LY  P+I VQ G LC +  L         L+SPG
Sbjct: 447 ERDEFLLYYQPIIDVQSGRLCGVEALIRWQHPIHGLVSPG 486


>sp|Q59833|GLGB1_STRCO 1,4-alpha-glucan-branching enzyme 1
           OS=Streptomyces coelicolor GN=glgB1 PE=3 SV=2
          Length = 774

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 127 GRKMSYGAIPSTSHSSTRWVLVPHYNFTREHRIMEELIK 11
           G++ + GA  S +H    W+L P Y  + +HR + +L++
Sbjct: 627 GQEFAQGAEWSEAHGPDWWLLDPEYGASADHRGVRDLVR 665


>sp|P25653|FIG2_YEAST Factor-induced gene 2 protein OS=Saccharomyces
            cerevisiae GN=FIG2 PE=2 SV=2
          Length = 1609

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +3

Query: 180  ERFLGNHTASSSL--TCPMTWLAKAKSVCFGISSIYTSLKLLNSVCTLGTAVLQSLESKN 353
            +RF+ +   SSSL  T     L+ A +   G+ ++YT+   L S  TLG     S  +K 
Sbjct: 1134 DRFVSSSKPSSSLSQTSIQYTLSTATTTISGLKTVYTTWCPLTSKSTLGATTQTSSTAKV 1193

Query: 354  NLMASVSVVSMRI 392
             + ++ S  S  I
Sbjct: 1194 RITSASSATSTSI 1206


>sp|Q68VT2|XERC_RICTY Tyrosine recombinase xerC OS=Rickettsia typhi
           GN=xerC PE=3 SV=1
          Length = 305

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +3

Query: 123 LPYEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAK-------SVCFGISSIY 281
           + Y   L   + F   Y +E    NH  +  +    +WLAK K       S+  G+S++ 
Sbjct: 29  IAYNNDLKHFLEFMNYYNSELVTINHIKTVDIRLIRSWLAKRKYENFTASSIARGLSTVK 88

Query: 282 TSLKLLNSVCTLGTAVLQSLES 347
              K L     L + ++ S++S
Sbjct: 89  NFYKFLEKTILLNSHIIFSIKS 110


>sp|Q82JF0|GLGB1_STRAW 1,4-alpha-glucan-branching enzyme 1
           OS=Streptomyces avermitilis GN=glgB1 PE=3 SV=1
          Length = 838

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 127 GRKMSYGAIPSTSHSSTRWVLVPHYNFTREHRIMEELIK 11
           G++ + GA  S +H    W+L P Y    +HR M +L++
Sbjct: 677 GQEFAQGAEWSETHGPDWWLLDPAYGAEPDHRGMRDLVR 715


>sp|Q6ZN68|D19P2_HUMAN Protein dpy-19 homolog 2-like 2 OS=Homo
           sapiens GN=DPY19L2P2 PE=2 SV=2
          Length = 376

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +3

Query: 129 YEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTW---LAKAKSVCFGISSIYTSLKLL 299
           Y   +   +SF LM+ N  +L ++ +SS L   MTW   L + +    G+S +   L + 
Sbjct: 184 YMNMISVTLSFILMFGNSMYLSSYYSSSLL---MTWAIILKRNEIQKLGVSKLNCWL-IQ 239

Query: 300 NSVCTLGTAVLQSLESK 350
            S    GT +L+ L SK
Sbjct: 240 GSAWWCGTIILKFLTSK 256


>sp|Q05516|ZBT16_HUMAN Zinc finger and BTB domain-containing protein
           16 OS=Homo sapiens GN=ZBTB16 PE=1 SV=2
          Length = 673

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
 Frame = +3

Query: 171 YLNERFLGNHT---------ASSSLTCPMTWLAKAKSVCFGISSIYTSLKLLNSVCTLGT 323
           YL   F+  H+         A  SL  PM   + + S  FG+S++  +   ++S+ T+G 
Sbjct: 152 YLKNIFISKHSSEESGYASVAGQSLPGPMVDQSPSVSTSFGLSAMSPTKAAVDSLMTIGQ 211

Query: 324 AVLQ 335
           ++LQ
Sbjct: 212 SLLQ 215


>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14
           OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1
          Length = 632

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -2

Query: 227 WARKGGRSCMVTQEPLVQVHKGERYCFTQEPLIREKDVIWCYTKHLSFKYKMGSCATLQL 48
           W   G ++C  +QE L+  H G     T   +++    +WC +  +      GSC T ++
Sbjct: 281 WLDAGHKTCPKSQETLL--HAG----LTPNYVLKSLIALWCESNGIELPQNQGSCRTTKI 334
tr_hit_id Q9Y076
Definition tr|Q9Y076|Q9Y076_LEIMA Proteophosphoglycan (Fragment) OS=Leishmania major
Align length 33
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917664|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_H09.
         (396 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9Y076|Q9Y076_LEIMA Proteophosphoglycan (Fragment) OS=Leishma...    35   1.4  
tr|Q4FX64|Q4FX64_LEIMA Proteophosphoglycan ppg3, putative OS=Lei...    35   1.4  
tr|Q4FX61|Q4FX61_LEIMA Proteophosphoglycan ppg1 OS=Leishmania ma...    35   1.4  
tr|Q1IZ16|Q1IZ16_DEIGD Acyl-CoA dehydrogenase-like protein OS=De...    33   5.4  
tr|A4IAU8|A4IAU8_LEIIN Proteophosphoglycan ppg4 OS=Leishmania in...    33   7.1  
tr|Q93SQ7|Q93SQ7_STAEP Transport protein QacB OS=Staphylococcus ...    33   9.2  
tr|Q7WUJ5|Q7WUJ5_STAAU Antiseptic efflux protein QacB OS=Staphyl...    33   9.2  
tr|Q53607|Q53607_STAAU Multidrug efflux protein QacB OS=Staphylo...    33   9.2  
tr|A3FP00|A3FP00_STAAU Quaternary ammonium compound-resistance p...    33   9.2  
tr|A3FNZ9|A3FNZ9_STAAU Quaternary ammonium compound-resistance p...    33   9.2  

>tr|Q9Y076|Q9Y076_LEIMA Proteophosphoglycan (Fragment) OS=Leishmania
           major GN=ppg1 PE=4 SV=1
          Length = 873

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 281 IDRRDAKANRFCFC*PRHWARKGGRSCMVTQEP 183
           + R   + NRFC C P  WA K G S M+T +P
Sbjct: 568 LTRVSLEVNRFCGCLPSTWADKNGVSMMITAQP 600


>tr|Q4FX64|Q4FX64_LEIMA Proteophosphoglycan ppg3, putative
           OS=Leishmania major strain Friedlin GN=LMJ_0984 PE=4
           SV=1
          Length = 1435

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 281 IDRRDAKANRFCFC*PRHWARKGGRSCMVTQEP 183
           + R   + NRFC C P  WA K G S M+T +P
Sbjct: 615 LTRVSLEVNRFCGCLPSTWADKNGVSMMITAQP 647


>tr|Q4FX61|Q4FX61_LEIMA Proteophosphoglycan ppg1 OS=Leishmania major
           strain Friedlin GN=LMJ_0987 PE=4 SV=1
          Length = 2425

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 281 IDRRDAKANRFCFC*PRHWARKGGRSCMVTQEP 183
           + R   + NRFC C P  WA K G S M+T +P
Sbjct: 568 LTRVSLEVNRFCGCLPSTWADKNGVSMMITAQP 600


>tr|Q1IZ16|Q1IZ16_DEIGD Acyl-CoA dehydrogenase-like protein
           OS=Deinococcus geothermalis (strain DSM 11300)
           GN=Dgeo_1221 PE=4 SV=1
          Length = 466

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = -3

Query: 256 TDFAFANHVIGHVREEEAVWLPKNLSFKYIREKDIALPKNPS*GRKMSYGAIPSTSHSST 77
           T  AFA+  +G   E++A WLPK L  + I    +  P+    G ++S G   +      
Sbjct: 176 TGLAFASIALGGSAEQKAEWLPKMLDLETIGAFGLTEPEG---GSQVSQGMRTTCQRDGD 232

Query: 76  RWVL 65
            W+L
Sbjct: 233 HWIL 236


>tr|A4IAU8|A4IAU8_LEIIN Proteophosphoglycan ppg4 OS=Leishmania
           infantum GN=LinJ35.0590 PE=4 SV=1
          Length = 5967

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 281 IDRRDAKANRFCFC*PRHWARKGGRSCMVTQEP 183
           + R   + NRFC C P  WA K G S  +T +P
Sbjct: 614 LTRVSLEINRFCGCLPSTWAAKNGVSMTITAQP 646


>tr|Q93SQ7|Q93SQ7_STAEP Transport protein QacB OS=Staphylococcus
           epidermidis GN=qacB PE=4 SV=1
          Length = 514

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = +3

Query: 96  LGIAPYDIFLPYEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAKSVCFGISS 275
           +GIA   +F+ Y  F G  +S+S M L    +G  TAS ++   +  L    S     ++
Sbjct: 347 IGIAAIGMFIMY--FFGHPLSYSTMALALILVGAGTASLAVASALIMLETPTSKAGNAAA 404

Query: 276 IYTSLKLLNSVCTLGTAVLQSLES 347
           +  S+  L +V   G AVL SL S
Sbjct: 405 VEESMYDLGNV--FGVAVLGSLSS 426


>tr|Q7WUJ5|Q7WUJ5_STAAU Antiseptic efflux protein QacB
           OS=Staphylococcus aureus GN=qacB PE=4 SV=1
          Length = 514

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = +3

Query: 96  LGIAPYDIFLPYEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAKSVCFGISS 275
           +GIA   +F+ Y  F G  +S+S M L    +G  TAS ++   +  L    S     ++
Sbjct: 347 IGIAAIGMFIMY--FFGHPLSYSTMALALILVGAGTASLAVASALIMLETPTSKAGNAAA 404

Query: 276 IYTSLKLLNSVCTLGTAVLQSLES 347
           +  S+  L +V   G AVL SL S
Sbjct: 405 VEESMYDLGNV--FGVAVLGSLSS 426


>tr|Q53607|Q53607_STAAU Multidrug efflux protein QacB
           OS=Staphylococcus aureus GN=qacB PE=4 SV=1
          Length = 514

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = +3

Query: 96  LGIAPYDIFLPYEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAKSVCFGISS 275
           +GIA   +F+ Y  F G  +S+S M L    +G  TAS ++   +  L    S     ++
Sbjct: 347 IGIAAIGMFIMY--FFGHPLSYSTMALALILVGAGTASLAVASALIMLETPTSKAGNAAA 404

Query: 276 IYTSLKLLNSVCTLGTAVLQSLES 347
           +  S+  L +V   G AVL SL S
Sbjct: 405 VEESMYDLGNV--FGVAVLGSLSS 426


>tr|A3FP00|A3FP00_STAAU Quaternary ammonium compound-resistance
           protein (Fragment) OS=Staphylococcus aureus PE=4 SV=1
          Length = 112

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = +3

Query: 96  LGIAPYDIFLPYEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAKSVCFGISS 275
           +GIA   +F+ Y  F G  +S+S M L    +G  TAS ++   +  L    S     ++
Sbjct: 8   IGIAAIGMFIMY--FFGHPLSYSTMALALILVGAGTASLAVASALIMLETPTSKAGNAAA 65

Query: 276 IYTSLKLLNSVCTLGTAVLQSLES 347
           +  S+  L +V   G AVL SL S
Sbjct: 66  VEESMYDLGNV--FGVAVLGSLSS 87


>tr|A3FNZ9|A3FNZ9_STAAU Quaternary ammonium compound-resistance
           protein (Fragment) OS=Staphylococcus aureus PE=4 SV=1
          Length = 105

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = +3

Query: 96  LGIAPYDIFLPYEGFLGKAISFSLMYLNERFLGNHTASSSLTCPMTWLAKAKSVCFGISS 275
           +GIA   +F+ Y  F G  +S+S M L    +G  TAS ++   +  L    S     ++
Sbjct: 25  IGIAAIGMFIMY--FFGHPLSYSTMALALILVGAGTASLAVASALIMLETPTSKAGNAAA 82

Query: 276 IYTSLKLLNSVCTLGTAVLQSLES 347
           +  S+  L +V   G AVL SL S
Sbjct: 83  VEESMYDLGNV--FGVAVLGSLSS 104